AMCG00006618 (crebl2,LOC102781596)


Basic Information

Item Value
gene id AMCG00006618
gene name crebl2,LOC102781596
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 12017869 ~ 12024549 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006618
GCTGCTTCGGTTTAATACTCAGGAAGCAGGCGAGTAGAGGTAAACAATGTGAAGGGTGGTTGTTTTATGGAGGAATATTGGTATTTTTTCTGGGGAATCGGCGTGTGATTTGTATTGTACAGGCTCTGTTGATAGTCTGTTTGGTCAGAccctgtgtttaaattaaaaatatatatcgtTTTGTCTTCATTGACTGTGTTCATGAGTATTAAATAGCCTGGCCTGTCCAAAATGGATGACAGCAAGATGGTGGGTGGCAAAGTAAAGAAGCCAGGGAAACGAGGTCGTAAACCAGCCAAGATTGACTTGAAGGCCAAGCTGGAACGCAGCCGTCAGAGTGCGCGGGAGTGTCGGGCCAGGAAGAAGCTGAGGTATCAGTACCTGGAGGAGCTGGTGTCCAGCAAGGAAAGAGCCATCTGTGCACTGCGGGAGGAGCTGGAGATGtacaaGCAGTGGTGCTCAGCAATGGATCAGGGAAAGATTCCTTCAGAAATTAAGGCTCTTCTGACTGGAGATGAACATAAGATGTCACAGAGTACTAGCAAGATATCCAAGAACAGCAAGAAtaacacaaacagcaacagtCAATaGTGAAGAATCTGTCTTGAATCCGAACTAATTGGACAATTCTGCAGCAGCCAACCCGTGTGTATACAGCTTCCAAATGATAGAACATGTATTACAAATGGAGGAAATGTTTATATTAGTGATTGGTTAGTGAGGATTGTATATAAGACCTGAATGCTGAACGCAAAGCCCTTTAGAATTTGTCCGGCTGTAAAGGGGGTGTGAGTACAATACATTGATATTGACTTTGCTTACTTATACAGGTAAGCATTGAATGGGGACTATGTTCCTTTAAGAGatggaagatttattttttatctgagTTGACCTGGGAATCAACGGAAatcttttactgtattttgttctcCGAAATTTGACAcgcattttatttcaaataactgCTTTGGCATCTGATTACTGACAGTAAATGCACAAACTCCCCATCCCATTTCCCTGTAAATACATATGAGAAATGAGGATCCTCTACAATAGTATCTGAATGATCCACGGCTGCAGAGCTGCAGTTTTACTTCAGTGTCCAGAGCTATTGCTTAGACTGTTCGGTGCATCTTTCCAGTATTAAGTtacttacaatacaatacaaatgtcaaAACCATCCTACTGCAAATCAGTTCTACTGCTTGGTTAAATATGGTCTGTTACAGAGGATTGTAAATGATCCTCACTGTTGtgaattgaaaaacatttgaaaatatgtaacTCTTTTAGACCCCATgaagtaaagaaacaaaacacctgCTTTCTCTAGTTACATCTGTGGGCCAAAAACACCCAAAACTGCTTTAGAATATGTAATTGAGTAGTATTCAATCCAGATTTGTAGCATAGAGAATATTTGTTCCTGCTATTTGGTGTAGttagaaaagcaagaaaaactACAAAGCATGAGAGCCTCCCACttattgtaatacaatacaatacaatactgcaGGCACTTTTTATGTCTATAGCTGTTGGGTAATTAATGGTATAAACAGTGAAAGTTCAGCAACATGTACCACTCTTATCTCCTAAGTGTTTGATTTTGGTCTGTAAGACataagaaaattatttaatctatttaaatttCCCCTTTTTATGAATGATCCGCATATTCTTTCCTGACTCCCAGATATCGGTTTTGATCTTAAACAGTGTTCTGCTAGTGCCATATTTCTAAAAcctttacagaaattaaaatgacccTTACTGGGATTTGCAAAGACGTTTATAGCCGgacatattaaaatgactatTGTACAGCCCCTTACAATGACTGAAGGTGACATTTTATACTATATCCTTTCTGTCAGGGGGAATATTTtggaagtagtagtaataaaataagtaatttttgTCATCAATTTCatcaaaaactatatatatttttgttgcaCTTCTGCcctaaatattttattcctcAAATACCAATAAAACCATGAGGGACATTTTACGTTCTGTGgcccaaaacataaataaaaagctgagtTTTGATTTGTCCCTGTAAAGATTATGTACTTAGTGGACTGCCAGTTGTTTGTCCCTGTGTCATTCTGGTTCTATTCCAAGATGTTTCGAAAGCAGGAGTCCACCTCAACGTGTCTAGTGGAAACTAGGCATAATATTACTTTGGTAAAACCAGCAGCTACCTGCTTTGACCGACATTCATTTTTGTAGTTTCTTTTGTGTCATTAGTATTTTCCCATACAAACTTTTGAATGTCCTGCACATCAGTGTGCATATTTAACCACAAATCAGTTGTGTCTTGATTATTCTGTACCTAGTCATATAAAAGACAAATCCTTTTAAAAAGCTAAAGTGCATAAAAATGTCAGTcgataaaaatgtgtttaatctgTCCTGATTGTAACATGCTTGTGATCTAAGGTGCAAGATTAGTGGTATAATGTTTAAGTAGTCTATAAcatataatataacatataacataaaatatgtacTGAGGCATAGGTATTCAGGCAGATTGATGCAAAATATTGGATTTAaagcagtggaaaaaaaacttctaaaataaaaccatgaaaaacataattcgATAACTACTGAGACTGATTGTTGTGTAGTAGGTGTCTTATTACCAAATTGTGTGAGAAAAACCGATAGAAATTAGTTCTTTGTCCGAAAAGCATCAGCAGCTAGGCCTCAGTTTGTAGATCTTTCAAAGAATGAAACTTGATTGTTAAGGCCACAATGCACATGTAAGAAAAGCTTGAAAACCAAAATCTCTGACTAAGTCACCCTTTTCAAGGGAGAGATGTTTTTAGAGAAGGGAGCTTGGAAAAATTCTCATATTTGCGTAAGTAGCCCTAGATAATTCCAGTAAACTCTCTAAGAAATTAACCCAAAACAGCTGTGCACCttttgatgtttaaaatgttttaataatatgatTGAAAATTTGAAATCATGATTCCAGGGAGGAAGGGGTGGGGACGTGTTGAACCGAAATGAGGTCTTGTTTgttggatttaaaatgtgtctatttttgtgtaatgtttaagcACTTTCAaaattttaagtatttatgttGAGTGGTTTTATTTCCACCTCTGAGGGCAGTTTAGTCCTGCTCATGCAGTTTGCCAGCAGGTACAACATATTCTCCCCTGACTTGCATTCTCAATGAAAACTGTTTTGATCCACAATCCCTTCTGAATGTATCTGACCAATGTTAGGCTACCTGGGATTGTTGTCTGATATTTGGACAACTTAGAGAAGTGTTTGCGTCTTGCTCTGAGATGCACTGCAGAAAGAAGCAGTCTCCAGATCTCTCCCCATCTGCTGAGCTAAATGTGGTAAAAACCCTGGAACATCTCCGATTGGCTCAAGAAGGTTCCTGGAAGGACAAACCACTGAAGAAtctctttaagaaaaaaaaaaaaagacagcagggGGGAgagaatttaaattattctacaGTGCAAGGGTGGAATATTTCacaatgatttttaaaagaTAACCCTTGCCTGGAGAACTAGGATATTTAAACTGGAGAACAGGAACAGAATAAAGCATATTAGCACTGgccaaaaacaacacagaaaaaaccTTCCAGtgtaagaaataatacaatattgaaatCTAAGAGTACTAtctatacacaaacatacataacataagaacatttaaatcagAATGTGTAACAGTTCGAATTTAATTTCCTTGACCAGTGtcaaattttgtattttacatgttgcacagcacaaaaaatacaaagatgaATCAGTCACTGGTAAAGGTGGACTGTATagcaatacagtatttaaaagcaaactgaATGACAGAAGGCCGTTGATGAGGGCAGGCTGTTGGTGCATGTCCAAAGGTCTGTTCAGAGATTTCACATCCATCACCCATCTTGCACTTCAGAGCAAATAAAGCGAAACACTATAACCTTCTCTTTAATGAATTAGCTGGTccttgattttttattttattttattttttacaatgctTTGTACGAGTtagtatttaaaagtatattgtgATGTCCAAATgctatattttttacttttacaaaataagctatatgattgtaaaatgtatctgaaTGCTCAaaagtgcaaatatatatttttcctttagacTAAATAGAACTGTCAGTTTATACTATTAAAGCTGGTTTGACATTA
>TU139024
CTGCTTCGGTTTAATACTCAGGAAGCAGGCGAGTAGAGATGGTGGGTGGCAAAGTAAAGAAGCCAGGGAAACGAGGTCGTAAACCAGCCAAGATTGACTTGAAGGCCAAGCTGGAACGCAGCCGTCAGAGTGCGCGGGAGTGTCGGGCCAGGAAGAAGCTGAGGTATCAGTACCTGGAGGAGCTGGTGTCCAGCAAGGAAAGAGCCATCTGTGCACTGCGGGAGGAGCTGGAGATGtacaaGCAGTGGTGCTCAGCAATGGATCAGGGAAAGATTCCTTCAGAAATTAAGGCTCTTCTGACTGGAGATGAACATAAGATGTCACAGAGTACTAGCAAGATATCCAAGAACAGCAAGAAtaacacaaacagcaacagtCAATaGTGAAGAATCTGTCTTGAATCCGAACTAATTGGACAATTCTGCAGCAGCCAACCCGTGTGTATACAGCTTCCAAATGATAGAACATGTATTACAAATGGAGGAAATGTTTATATTAGTGATTGGTTAGTGAGGATTGTATATAAGACCTGAATGCTGAACGCAAAGCCCTTTAGAATTTGTCCGGCTGTAAAGGGGGTGTGAGTACAATACATTGATATTGACTTTGCTTACTTATACAGGTAAGCATTGAATGGGGACTATGTTCCTTTAAGAGatggaagatttattttttatctgagTTGACCTGGGAATCAACGGAAatcttttactgtattttgttctcCGAAATTTGACAcgcattttatttcaaataactgCTTTGGCATCTGATTACTGACAGTAAATGCACAAACTCCCCATCCCATTTCCCTGTAAATACATATGAGAAATGAGGATCCTCTACAATAGTATCTGAATGATCCACGGCTGCAGAGCTGCAGTTTTACTTCAGTGTCCAGAGCTATTGCTTAGACTGTTCGGTGCATCTTTCCAGTATTAAGTtacttacaatacaatacaaatgtcaaAACCATCCTACTGCAAATCAGTTCTACTGCTTGGTTAAATATGGTCTGTTACAGAGGATTGTAAATGATCCTCACTGTTGtgaattgaaaaacatttgaaaatatgtaacTCTTTTAGACCCCATgaagtaaagaaacaaaacacctgCTTTCTCTAGTTACATCTGTGGGCCAAAAACACCCAAAACTGCTTTAGAATATGTAATTGAGTAGTATTCAATCCAGATTTGTAGCATAGAGAATATTTGTTCCTGCTATTTGGTGTAGttagaaaagcaagaaaaactACAAAGCATGAGAGCCTCCCACttattgtaatacaatacaatacaatactgcaGGCACTTTTTATGTCTATAGCTGTTGGGTAATTAATGGTATAAACAGTGAAAGTTCAGCAACATGTACCACTCTTATCTCCTAAGTGTTTGATTTTGGTCTGTAAGACataagaaaattatttaatctatttaaatttCCCCTTTTTATGAATGATCCGCATATTCTTTCCTGACTCCCAGATATCGGTTTTGATCTTAAACAGTGTTCTGCTAGTGCCATATTTCTAAAAcctttacagaaattaaaatgacccTTACTGGGATTTGCAAAGACGTTTATAGCCGgacatattaaaatgactatTGTACAGCCCCTTACAATGACTGAAGGTGACATTTTATACTATATCCTTTCTGTCAGGGGGAATATTTtggaagtagtagtaataaaataagtaatttttgTCATCAATTTCatcaaaaactatatatatttttgttgcaCTTCTGCcctaaatattttattcctcAAATACCAATAAAACCATGAGGGACATTTTACGTTCTGTGgcccaaaacataaataaaaagctgagtTTTGATTTGTCCCTGTAAAGATTATGTACTTAGTGGACTGCCAGTTGTTTGTCCCTGTGTCATTCTGGTTCTATTCCAAGATGTTTCGAAAGCAGGAGTCCACCTCAACGTGTCTAGTGGAAACTAGGCATAATATTACTTTGGTAAAACCAGCAGCTACCTGCTTTGACCGACATTCATTTTTGTAGTTTCTTTTGTGTCATTAGTATTTTCCCATACAAACTTTTGAATGTCCTGCACATCAGTGTGCATATTTAACCACAAATCAGTTGTGTCTTGATTATTCTGTACCTAGTCATATAAAAGACAAATCCTTTTAAAAAGCTAAAGTGCATAAAAATGTCAGTcgataaaaatgtgtttaatctgTCCTGATTGTAACATGCTTGTGATCTAAGGTGCAAGATTAGTGGTATAATGTTTAAGTAGTCTATAAcatataatataacatataacataaaatatgtacTGAGGCATAGGTATTCAGGCAGATTGATGCAAAATATTGGATTTAaagcagtggaaaaaaaacttctaaaataaaaccatgaaaaacataattcgATAACTACTGAGACTGATTGTTGTGTAGTAGGTGTCTTATTACCAAATTGTGTGAGAAAAACCGATAGAAATTAGTTCTTTGTCCGAAAAGCATCAGCAGCTAGGCCTCAGTTTGTAGATCTTTCAAAGAATGAAACTTGATTGTTAAGGCCACAATGCACATGTAAGAAAAGCTTGAAAACCAAAATCTCTGACTAAGTCACCCTTTTCAAGGGAGAGATGTTTTTAGAGAAGGGAGCTTGGAAAAATTCTCATATTTGCGTAAGTAGCCCTAGATAATTCCAGTAAACTCTCTAAGAAATTAACCCAAAACAGCTGTGCACCttttgatgtttaaaatgttttaataatatgatTGAAAATTTGAAATCATGATTCCAGGGAGGAAGGGGTGGGGACGTGTTGAACCGAAATGAGGTCTTGTTTgttggatttaaaatgtgtctatttttgtgtaatgtttaagcACTTTCAaaattttaagtatttatgttGAGTGGTTTTATTTCCACCTCTGAGGGCAGTTTAGTCCTGCTCATGCAGTTTGCCAGCAGGTACAACATATTCTCCCCTGACTTGCATTCTCAATGAAAACTGTTTTGATCCACAATCCCTTCTGAATGTATCTGACCAATGTTAGGCTACCTGGGATTGTTGTCTGATATTTGGACAACTTAGAGAAGTGTTTGCGTCTTGCTCTGAGATGCACTGCAGAAAGAAGCAGTCTCCAGATCTCTCCCCATCTGCTGAGCTAAATGTGGTAAAAACCCTGGAACATCTCCGATTGGCTCAAGAAGGTTCCTGGAAGGACAAACCACTGAAGAAtctctttaagaaaaaaaaaaaaagacagcagggGGGAgagaatttaaattattctacaGTGCAAGGGTGGAATATTTCacaatgatttttaaaagaTAACCCTTGCCTGGAGAACTAGGATATTTAAACTGGAGAACAGGAACAGAATAAAGCATATTAGCACTGgccaaaaacaacacagaaaaaaccTTCCAGtgtaagaaataatacaatattgaaatCTAAGAGTACTAtctatacacaaacatacataacataagaacatttaaatcagAATGTGTAACAGTTCGAATTTAATTTCCTTGACCAGTGtcaaattttgtattttacatgttgcacagcacaaaaaatacaaagatgaATCAGTCACTGGTAAAGGTGGACTGTATagcaatacagtatttaaaagcaaactgaATGACAGAAGGCCGTTGATGAGGGCAGGCTGTTGGTGCATGTCCAAAGGTCTGTTCAGAGATTTCACATCCATCACCCATCTTGCACTTCAGAGCAAATAAAGCGAAACACTATAACCTTCTCTTTAATGAATTAGCTGGTccttgattttttattttattttattttttacaatgctTTGTACGAGTtagtatttaaaagtatattgtgATGTCCAAATgctatattttttacttttacaaaataagctatatgattgtaaaatgtatctgaaTGCTCAaaagtgcaaatatatatttttcctttagacTAAATAGAACTGTCAGTTTATACTATTAAAGC

Function

symbol description
crebl2 Predicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in positive regulation of biosynthetic process; positive regulation of fat cell differentiation; and positive regulation of glucose import. Predicted to act upstream of or within cell differentiation. Predicted to be active in nucleus. Orthologous to human CREBL2 (cAMP responsive element binding protein like 2).

NR:

description
cAMP-responsive element-binding protein-like 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006618 True 4217 mRNA 0.36 4 12017869 12024549
TU139024 False 3996 TUCP 0.36 4 12017882 12024548

Neighbor

gene id symbol gene type direction distance location
AMCG00006619 NA coding downstream 33054 11965268 ~ 11984815 (-)
AMCG00006615 NA coding downstream 86710 11907802 ~ 11931159 (-)
AMCG00006611 rerg,LOC107569200 coding downstream 178143 11825901 ~ 11839726 (-)
AMCG00006613 timp3,LOC106609153,LOC100696712 coding downstream 262389 11738219 ~ 11755480 (-)
AMCG00006612 NA coding downstream 398045 11612595 ~ 11619824 (-)
AMCG00006626 NA coding upstream 317198 12341747 ~ 12346094 (-)
AMCG00006627 rpl18a,LOC106593275 coding upstream 326218 12350767 ~ 12354277 (-)
AMCG00006628 rtcb coding upstream 351359 12375908 ~ 12380970 (-)
AMCG00006633 NA coding upstream 362363 12386912 ~ 12392701 (-)
AMCG00006634 nup50,LOC107687567,LOC107601009 coding upstream 408474 12433023 ~ 12444850 (-)
G110957 NA non-coding downstream 115701 11899963 ~ 11902168 (-)
G110942 NA non-coding downstream 221527 11794536 ~ 11796342 (-)
G110940 NA non-coding downstream 224368 11790052 ~ 11793501 (-)
G110939 NA non-coding downstream 228635 11788940 ~ 11789234 (-)
G110917 NA non-coding downstream 345386 11671569 ~ 11672483 (-)
G111158 NA non-coding upstream 735022 12759571 ~ 12760836 (-)
G111182 NA non-coding upstream 930061 12954610 ~ 12959628 (-)
G111389 NA non-coding upstream 1979204 14003753 ~ 14004141 (-)
G111421 NA non-coding upstream 2111779 14136328 ~ 14137746 (-)
G111448 rap1b,LOC106576640,LOC107695907 non-coding upstream 2143582 14168131 ~ 14214816 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other downstream 1910584 10087275 ~ 10107285 (-)
G110605 NA other downstream 2457765 9545495 ~ 9560104 (-)
G110570 LOC106576073 other downstream 3018605 8997637 ~ 8999264 (-)
G110520 bmt2 other downstream 3223807 8783905 ~ 8794062 (-)
G110507 NA other downstream 3293517 8722388 ~ 8724352 (-)
AMCG00006621 borcs5 other upstream 24945 12049494 ~ 12069660 (-)
AMCG00006622 lrp6 other upstream 46841 12071390 ~ 12130383 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other upstream 112633 12137182 ~ 12140405 (-)
AMCG00006641 mrps33,LOC106591474 other upstream 851743 12876292 ~ 12878656 (-)
AMCG00006663 hmga2 other upstream 1430883 13455432 ~ 13503228 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) LOC118942856 crbl2 misc NC_048585.1 CM023239.2 8805889 ~ 8808961 (-)