AMCG00006625 (c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98)


Basic Information

Item Value
gene id AMCG00006625
gene name c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 12137182 ~ 12140405 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006625
ATGAAAAGCCGGAAGAGGCTGAGCGACACGTGTGTTTCAAGCATGGCACCCGGGGGCAAGATCAACAGACCCAAAACAGAGCTGGGGAAGAAACTCTTCAAGCGGCGCCGGGCTCTGAcgaaagagaagagaaggaagCATAAGATTGTGGGGGCTGTGATTGACAAAGGGCTGATCACTATTCACCACCTGAAGAAGAGAAACTCCAGCGCTCGAGCAAATATCACACTCTCGGGAAAGAAAAAACGCAAACTCATAAAGCAGTTGCAGCACATGGATCGGGAGAAAGCCACGATGGAGGTTGAGATGGCACCCAAAGGGAAGGCACCTGACTCtgtaaaaactagaaaaaataaCCCCAAACCCCAAGATGTCAGCATGGAGGAAGCAGTGGTCATGGACTGAATAAACGGATGCCTGAATAACTCCTGTGCACTAAAATGGCTGAATACAGAAGTAAAGGCTATTTTAGGAACTGCTTCATAGGCGAATGCCAGTGTGGGAGCATTGCAGCCGACGAGCagctgaatttgtaatgattgccCCGAGCCGTATCACCTCATGAGAAGCTCTCATGGTAGTCGATATCCCTGATTTgaatctcaatcccattgatatatatatatattttttactattGTATTCatgcacataaaaaaagaaattgaattaattttactttcataatttggcagacattttcaaagattATATAGACCCTCATGTCACCCAGCAGTTCAGCTCTGCAGGGTTTGGtcctgacctttgaccttttgTGTGTGCAGGCAATCCCCTAATTTTATAACGACAAAAGCAAGGATGGGCTGTAAAGCAGTTACGTGTCACAGAGTAGTGACAGTTATAGTTTTAGTAGTCATTCACTCAGCTGGAGTAAACCAGTACaccaaagttaattaaaaaatgactatgaaaaatactttatatgtgttttgttttattgagaaCTGTGACAGTGAATAAACATCAGGTCAATAGATCAAAAATAGAGGTTGGAAAGAAGGTATATATGAGTTACATTCCTGCACATAAACAGATTTCAGACCCAGATGTATTTCTTAAACTGTAACACAGAATGAGATTTGTGTGCTGCTGGAATGAAAAATACAGCAATGTattagcaaataaaaataactgaaataaatacctGGGGAAACCTATCAAACTATCATAGTACCTTAACTTGttgaataacattttatgactgtgttgttttgtttgtgcattgTTTAACTTGtccttaaattacattaaagtgtACAATTTGGACCATTATTGCATTTTTGCTTTATTGCATTGATTCTCTGACAGAAGAGAATGTTGTTTAACTGAACGTACCActataaaacagtgtatttcTGATGTCTCTGGGCAGCAGCTGTATTTTATTGC
>TU139089
AAGAGGCTGAGCGACACGTGTGTTTCAAGCATGGCACCCGGGGGCAAGATCAACAGACCCAAAACAGAGCTGGGGAAGAAACTCTTCAAGCGGCGCCGGGCTCTGAcgaaagagaagagaaggaagCATAAGATTGTGGGGGCTGTGATTGACAAAGGGCTGATCACTATTCACCACCTGAAGAAGAGAAACTCCAGCGCTCGAGCAAATATCACACTCTCGGGAAAGAAAAAACGCAAACTCATAAAGCAGTTGCAGCACATGGATCGGGAGAAAGCCACGATGGAGGTTGAGATGGCACCCAAAGGGAAGGCACCTGACTCtgtaaaaactagaaaaaataaCCCCAAACCCCAAGATGTCAGCATGGAGGAAGCAGTGGTCATGGACTGAATAAACGGATGCCTGAATAACTCCTGTGCACTAAAATGGCTGAATACAGAAGTAAAGGCTATTTTAGGAACTGCTTCATAGGCGAATGCCAGTGTGGGAGCATTGCAGCCGACGAGCagctgaatttgtaatgattgccCCGAGCCGTATCACCTCATGAGAAGCTCTCATGGTAGTCGATATCCCTGATTTgaatctcaatcccattgatatatatatatattttttactattGTATTCatgcacataaaaaaagaaattgaattaattttactttcataatttggcagacattttcaaagattATATAGACCCTCATGTCACCCAGCAGTTCAGCTCTGCAGGGTTTGGtcctgacctttgaccttttgTGTGTGCAGGCAATCCCCTAATTTTATAACGACAAAAGCAAGGATGGGCTGTAAAGCAGTTACGTGTCACAGAGTAGTGACAGTTATAGTTTTAGTAGTCATTCACTCAGCTGGAGTAAACCAGTACaccaaagttaattaaaaaatgactatgaaaaatactttatatgtgttttgttttattgagaaCTGTGACAGTGAATAAACATCAGGTCAATAGATCAAAAATAGAGGTTGGAAAGAAGGTATATATGAGTTACATTCCTGCACATAAACAGATTTCAGACCCAGATGTATTTCTTAAACTGTAACACAGAATGAGATTTGTGTGCTGCTGGAATGAAAAATACAGCAATGTattagcaaataaaaataactgaaataaatacctGGGGAAACCTATCAAACTATCATAGTACCTTAACTTGttgaataacattttatgactgtgttgttttgtttgtgcattgTTTAACTTGtccttaaattacattaaagtgtACAATTTGGACCATTATTGCATTTTTGCTTTATTGCATTGATTCTCTGACAGAAGAGAATGTTGTTTAACTGAACGTACCActataaaacagtgtatttcTGATGTCTCTGGGCAGCAGCTGTATTTTATTGCTCTCATCTGGTACTACAGCTGTGTACAGAAAGAGCTATTAGTATTTAATTAGCATTAAAAGTGACTAAGGAGTTACCGGAAAGGCATGGCTAACAAATCTGGGCTCAAG

Function

NR:

description
uncharacterized protein C11orf98 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006625 False 1410 mRNA 0.40 4 12137291 12140405
TU139089 True 1507 TUCP 0.39 4 12137182 12140393

Neighbor

gene id symbol gene type direction distance location
AMCG00006619 NA coding downstream 152367 11965268 ~ 11984815 (-)
AMCG00006615 NA coding downstream 206023 11907802 ~ 11931159 (-)
AMCG00006611 rerg,LOC107569200 coding downstream 297456 11825901 ~ 11839726 (-)
AMCG00006613 timp3,LOC106609153,LOC100696712 coding downstream 381702 11738219 ~ 11755480 (-)
AMCG00006612 NA coding downstream 517358 11612595 ~ 11619824 (-)
AMCG00006626 NA coding upstream 201342 12341747 ~ 12346094 (-)
AMCG00006627 rpl18a,LOC106593275 coding upstream 210362 12350767 ~ 12354277 (-)
AMCG00006628 rtcb coding upstream 235503 12375908 ~ 12380970 (-)
AMCG00006633 NA coding upstream 246507 12386912 ~ 12392701 (-)
AMCG00006634 nup50,LOC107687567,LOC107601009 coding upstream 292618 12433023 ~ 12444850 (-)
G110957 NA non-coding downstream 235014 11899963 ~ 11902168 (-)
G110942 NA non-coding downstream 340840 11794536 ~ 11796342 (-)
G110940 NA non-coding downstream 343681 11790052 ~ 11793501 (-)
G110939 NA non-coding downstream 347948 11788940 ~ 11789234 (-)
G110917 NA non-coding downstream 464699 11671569 ~ 11672483 (-)
G111158 NA non-coding upstream 619166 12759571 ~ 12760836 (-)
G111182 NA non-coding upstream 814205 12954610 ~ 12959628 (-)
G111389 NA non-coding upstream 1863348 14003753 ~ 14004141 (-)
G111421 NA non-coding upstream 1995923 14136328 ~ 14137746 (-)
G111448 rap1b,LOC106576640,LOC107695907 non-coding upstream 2027726 14168131 ~ 14214816 (-)
AMCG00006622 lrp6 other downstream 6799 12071390 ~ 12130383 (-)
AMCG00006621 borcs5 other downstream 67522 12049494 ~ 12069660 (-)
AMCG00006618 crebl2,LOC102781596 other downstream 112633 12017869 ~ 12024549 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other downstream 2029897 10087275 ~ 10107285 (-)
G110605 NA other downstream 2577078 9545495 ~ 9560104 (-)
AMCG00006641 mrps33,LOC106591474 other upstream 735887 12876292 ~ 12878656 (-)
AMCG00006663 hmga2 other upstream 1315027 13455432 ~ 13503228 (-)
G111489 NA other upstream 2219823 14360228 ~ 14364422 (-)
G111621 NA other upstream 2571612 14712017 ~ 14753970 (-)
G111767 LOC107575789 other upstream 3612416 15752821 ~ 15753235 (-)

Expression


Co-expression Network