AMCG00006626


Basic Information

Item Value
gene id AMCG00006626
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 12341747 ~ 12346094 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006626
TTGTCCAGTGCTCCAGCCCTGCCTAGGACAACACAAGTGGTGTTTGACTTCCAGTCTGGGAAGGCTGTCCCTCATCTTCGTGAACCGCCCAATCTTTACGGTGTGACTGGACAGGGGGCCCAGACAGTGTCCCGCTGGCCCCATGAGTGTGAGGTTATCCCAGATGAAATCCATCACATTGAGTGGGCCCCGCCTTCCCCGGAGCCCTTGTGCATTCACGTGAATCTGAAGGCAAGACCGCACATGAGCGAGGCAGGAGAAGGCACGCTGATATACATGGCAGATGGAGCAAACAAACAGGCCTTTTTTTTTGGGTCCCGTGTTGGAGGCAGCCGTGCTCCTTTGAAGGCGGCTGCTGCGTATCTGTCCGGACCGAGCGACAACACCTTGCTGTTCGAGGCTCGATTCGAGAGTGGCAACCTGCAGAGCGTCGTCAAAGTggGTGACTATGATTATGAACTCACCCTCCGCCCCGACCtttacacagagaaacacacacagtggtTCTATTTCCGGGTCAGCAACACACGCGCAGATGTGCGTTATCGGTTCACCATCACCAATCTCCTGAAAAAGACCAGTCTGTACAAGGTGGGACAGCGACCCCTGCTGTACTCGGAGATGAAGGCCCAGGCAGCTGGTGTGGGCTGGCACCGTGTTGGCAATGAGGTGTCGTACTACCCCAATGGGAGATGGCAAGCGGGCAGCCCTTGCTACTCCCTGAGCTGGACTTTCTCCTTCCCCTACGATGGGGATACTTGCTACTTTGCGCATTGCTACCCTTACACCTACTCCAACCTGCGTGCGTATCTCTCGGAGATCGAGCAGGATCCTGTGCGCTCCCGCTTCTGTAAAATCAGGACACTGTGCCGCTCGCTGGCTGGGAATCTGGTGCCCGTCCTCACGGTGACCAGTCCCACACAAGGGGAGGGTGGAGTTCTGAAGCCGGTGGTGGTGGTGACGGCGCGCGTTCACCCCGGAGAGACCAACAGCTCCTGGGTGATGAAGGGGCTCCTGGACTGGCTCCTGGGGAGCTCTCACGATGCGGCACTGCTGCGAGactcttttgttttcaaactagTGCCAATGCTGAATCCTGACGGGGTCATTGTGGGTAACCACCGCTGCTCCTTGGCAGGCTGTGACCTAAATCGCAAATACAAGTCCATTCTGCAGGAGACTTTCCCTACTGTGTGGGCTACAAAGAACATGGTCTGCCGGCTCCTCAAGGAACGCGAGGTGCTGCTCTACTGTGATCTGCACGGACACAACCGCAAGCACAACGTCTTCATTTATGGATGTGAGGGTCTACAGCACCGAGGGAGAGGGCCACATGAGCGAGTCTTCCCTCTGATGTTGAGCAAGAACTGTCCAGACATGTTCTCCCTTCGGAGCTGCAAGTTCGAGGTGCAGCGCAGTAAGAAAGGAACGGGGCGCGTGGCCCTGTGGGAACTAGGGGTATCTAACAGTTTCACCCTGGAGACCTCTTTCTGTGGTGCTGACATGGGTAACAAGAAGGGAACTCATTTCAGCACATCTGACTTGGAGGTGTTGGGGTTTCATTTCTGTGACACTGTTTTGGATTTCTGTGATCCCAACAAGACCAAGTACAGGGCTTGTCTGAGAGAGCTGCGGCACATGATGCGACGGGAGGCTACCCTACCTTTTCAGACCCTGGACACACGTGTAGAGTCAGACAACTCTCTCGGTGACCACAAGGCC

Function

GO: NA

KEGG:

id description
K23437 AGBL2_3, CCP2_3; cytosolic carboxypeptidase protein 2/3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006626 True 1722 mRNA 0.56 7 12341747 12346094

Neighbor

gene id symbol gene type direction distance location
AMCG00006619 NA coding downstream 356932 11965268 ~ 11984815 (-)
AMCG00006615 NA coding downstream 410588 11907802 ~ 11931159 (-)
AMCG00006611 rerg,LOC107569200 coding downstream 502021 11825901 ~ 11839726 (-)
AMCG00006613 timp3,LOC106609153,LOC100696712 coding downstream 586267 11738219 ~ 11755480 (-)
AMCG00006612 NA coding downstream 721923 11612595 ~ 11619824 (-)
AMCG00006627 rpl18a,LOC106593275 coding upstream 4673 12350767 ~ 12354277 (-)
AMCG00006628 rtcb coding upstream 29814 12375908 ~ 12380970 (-)
AMCG00006633 NA coding upstream 40818 12386912 ~ 12392701 (-)
AMCG00006634 nup50,LOC107687567,LOC107601009 coding upstream 86929 12433023 ~ 12444850 (-)
AMCG00006637 arhgap8 coding upstream 201701 12547795 ~ 12561436 (-)
G110957 NA non-coding downstream 439579 11899963 ~ 11902168 (-)
G110942 NA non-coding downstream 545405 11794536 ~ 11796342 (-)
G110940 NA non-coding downstream 548246 11790052 ~ 11793501 (-)
G110939 NA non-coding downstream 552513 11788940 ~ 11789234 (-)
G110917 NA non-coding downstream 669264 11671569 ~ 11672483 (-)
G111158 NA non-coding upstream 413477 12759571 ~ 12760836 (-)
G111182 NA non-coding upstream 608516 12954610 ~ 12959628 (-)
G111389 NA non-coding upstream 1657659 14003753 ~ 14004141 (-)
G111421 NA non-coding upstream 1790234 14136328 ~ 14137746 (-)
G111448 rap1b,LOC106576640,LOC107695907 non-coding upstream 1822037 14168131 ~ 14214816 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other downstream 201342 12137182 ~ 12140405 (-)
AMCG00006622 lrp6 other downstream 211364 12071390 ~ 12130383 (-)
AMCG00006621 borcs5 other downstream 272087 12049494 ~ 12069660 (-)
AMCG00006618 crebl2,LOC102781596 other downstream 317198 12017869 ~ 12024549 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other downstream 2234462 10087275 ~ 10107285 (-)
AMCG00006641 mrps33,LOC106591474 other upstream 530198 12876292 ~ 12878656 (-)
AMCG00006663 hmga2 other upstream 1109338 13455432 ~ 13503228 (-)
G111489 NA other upstream 2014134 14360228 ~ 14364422 (-)
G111621 NA other upstream 2365923 14712017 ~ 14753970 (-)
G111767 LOC107575789 other upstream 3406727 15752821 ~ 15753235 (-)

Expression


Co-expression Network