AMCG00006631


Basic Information

Item Value
gene id AMCG00006631
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 12381327 ~ 12387504 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006631
AAAGCTGTCACTGGGGTGTTCTCAAATTAGTTTCTTCTTCAACAGGACTGAGGTTATGGGTTTTAGGTTATAAAACTGAGAACTGttgtaaaatattacacataataataaacgACTACAAATTCTTTATATCCTAAGGATGAGACATCGCCTTAATACCGACTCAACACTGCTCCCTGCGACACACTGAGGCATGAAGCTGCGAGTGAGACTGAACAAACAGTCCAGCCGCCTGGAGCTGGAGGGGGACCAGCCCTCACTGACGGAGCTGGCCATCCAAGTGAAGGAAATCATATTGCCCTCCTATGGATACAGCCCAGACACCGAGTTCACCCTCTCCCTCAATGGTAAAGAGCCCCTCGTTGACTCTGGGCAGACCCTGGCATCGTGCGGCATCGTGTCGGGGGACTTGGTGTGTGTGATCCTGTCACAGGACCCTCCGATTCCCAGCCCCGCTCCAGTCGGGAGCTCCAGTGGTCCGGTGGTGGGGAAGCAGCATGGGGAGAAGAGCACCTCTGGTTCCCCAGGAGCCCAGCAGGTGTCTACAGAAGGCCCCCATGACAGTCAGACGGGAACGAGGGCAGAGGAAGCCCAGCGGGAGGCCGAGGCAGGGTCCTTCATTCCCGAACCCATGCTCTGCAGTGAGGCCGAGGACGGGAAGGTGCCTCACTCTCTGGAGATGCTTTTCCATGGGGCTCAGTGCAGCAGCCCCAGCGACGCACTGATGGAGGCCGTGCATCTGATTATGCTGGAGACAGGATACGTGTCGCAGTGCCCTGATGTGAGAGCTGGGGAGATGCCTGCTGGGTGGAGGGCTGCCGGAGGGCTTTACAGGCTGCACTACACACACCCCTTctgtgaccacagcctggccatgcTAGTGGCTGTACTGATGGGAGACACACTTGTCATCAATGCCACTCTGAAGATAAATGAAGTAGTTGACAACGTGAGGAAAATCCAGCTTAAGCCCTCTTCCTATGTGACAGATTCATGGTGTGGGGAAAGTCCTGCAGATGTGTACAAGGACCTGAAGAAGCTATCCCGTATTTTCAAGGATCAGCTTGTTTACCCTCTGATTGCATCAGCCAGACAAGCCATGAACCTCCCAGCAGTGTTTGGGCTCACAGTGCTCCCTCCCGAGCTGCTGCTTCGTGTCTTGCGTCTCCTGGACATGCGGTCCGTGGTGACCCTGTCGGCTGTGAGCAGAGACCTCCACACAGCGACCGCCGATCCCACTCTGTGGAGGTTCCTGTACCAGCGCGATTTCAGAGATTCAACCAGCAGACCAAGAGAAACTGACTGGAAGGAACTCTACAAAAGGAGACGCCAGAGGGAAGCAACCCGTGTGCGCCGCACTGTCGTTTACCCACCAGTCCCCTCCCACCCATTTCCATTCCAGCCTCTGCCATTTCACCCCTTTCCCTTTGGTCCCAACCCGCCCTACCCCCCGGGCATCATCGGGGGAGAGTATGACCAGAGGCCGGGGCTGCCCTCTCTCATGCCCCGGCCACGTTTTGATCCCCTCGGGCCACAGCCAGGGCAAGACCCGCTGACTGGTGGCTCTGTCGGTCGACGGTCCCTGAGACCTTCGGGCAGCCGCTCATCGGACATCCGCCGAGGGTTTATTTGAATCTTTGTTCGAGGCTTTCTTCTGCTTGCAGACCAGCGGTGGAGCACCTCAGTTGGTCCAGGCTTTTCCACAGAACTTAACAGATGGTCAGGACCAACTGTGAATGctttacttacttattttaaGCAGCTGgtttatgtgattttttttttgcagtccaTTTCTATTAAGAACATTTGGGACAGATTATGCAACAGCTTATAAGCAGAAAGAACataagcaataaaaaagtcaaTGGTAATTTGTCAACACACTGAAGGGTGTGAACCCAGCCAAGCAATGTCTTCCTTTCTGCTACGAGGTGACCTTCTTGTGGTGTAGTGATCGATGTGGTACAGAGATAAGAGAGTCTCGGTTCTCTATTTACAGCTGACGGCACAGGATGAGCATGACTTTGTGAAGTACTTGGATATGCTCATTATCACCAGGCActtaactaactaaataaaaactgattcaTCAGCTGTCATCTCATAATGtggtttgctttctgtttttctttagtgtGGATTCATTTAAAAGGTTCTGAATCTGATCCAAGAGCATTAGGAGCCATTTAACTAAACCATTCTCAACTTTTTAGAAGCACAGGATGATTGTAGTTCACACCACTAAAACAATGCCTGTATTTAGAATAGGAGAACTAATGACAGCTGCGACATGACACACCACTGACATTCACACTTTACTCCCCACAACACTAGAGATGGACAACTGACTGCATTTACAGTCCTGCCATGACTTCTCATTTGCATACATCATTGTATCATCTGGCTATGATCTGTATTCTGCAGCCTGACACATCCGAGTAGAAGGGCAGCTTGTATGTTACAGCACCTCAGGATTTGTAGCCATCCTTCCTTTTGCAAGCAAAGGTGAGGAagaattgtgtgtatgttttggaGTAAAGCACCACATAGTGTAGGATTTTAATACATCAAACAAGTATTtatctgcaaaacaacaaacccattttaaaatcacaaaaacatgcATGAGAGACACACCATTTCAAAATGGCAGCTATCATTGGTGCAGGGGCCGTGTATCTCCAGCAG

Function

GO: NA

KEGG:

id description
K10293 FBXO7; F-box protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006631 True 2691 mRNA 0.50 10 12381327 12387504

Neighbor

gene id symbol gene type direction distance location
AMCG00006623 xpot,LOC102775766 coding upstream 6552 12356053 ~ 12374775 (+)
AMCG00006630 LOC104940688,LOC102079147,LOC106573136,LOC104946814 coding upstream 48073 12332334 ~ 12333254 (+)
AMCG00006629 NA coding upstream 53174 12326835 ~ 12328153 (+)
AMCG00006616 NA coding upstream 327300 12031655 ~ 12054027 (+)
AMCG00006620 NA coding upstream 367006 12013086 ~ 12014321 (+)
AMCG00006632 kiaa0930,zgc:172139,LOC107562136,LOC107687566,LOC107719873,LOC107699202 coding downstream 37702 12425206 ~ 12431044 (+)
AMCG00006635 NA coding downstream 142836 12530340 ~ 12540008 (+)
AMCG00006639 LOC107562148,LOC107741714,LOC105912408,LOC107687569 coding downstream 230013 12617517 ~ 12618947 (+)
AMCG00006638 kcna1a,LOC105912431,LOC105913409,LOC108279524,LOC103366871 coding downstream 264435 12651939 ~ 12653420 (+)
AMCG00006640 LOC103371429,LOC103459365,LOC103382520,LOC101068332,LOC100696994 coding downstream 326976 12714480 ~ 12716165 (+)
G111063 NA non-coding upstream 27964 12350757 ~ 12353363 (+)
G111008 crebl2,crbl2 non-coding upstream 356778 12022810 ~ 12024549 (+)
G110930 NA non-coding upstream 587792 11793168 ~ 11793535 (+)
G110916 NA non-coding upstream 708879 11671569 ~ 11672448 (+)
G110883 NA non-coding upstream 1031210 11349884 ~ 11350117 (+)
G111148 NA non-coding downstream 372067 12759571 ~ 12770925 (+)
G111161 NA non-coding downstream 458419 12845923 ~ 12847502 (+)
G111240 NA non-coding downstream 966452 13353956 ~ 13357071 (+)
G111272 hmga2 non-coding downstream 1070535 13458039 ~ 13502571 (+)
G111420 NA non-coding downstream 1748815 14136319 ~ 14137744 (+)
AMCG00006624 NA other upstream 58049 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 2813051 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 3657261 8710750 ~ 8724066 (+)
G110445 NA other upstream 4204541 8175760 ~ 8176786 (+)
G110279 NA other upstream 4726133 7653672 ~ 7655194 (+)
AMCG00006636 NA other downstream 232558 12620062 ~ 12651815 (+)
G111197 NA other downstream 623680 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 1546162 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 8549993 20937497 ~ 20944977 (+)
G112567 NA other downstream 8660832 21048336 ~ 21049038 (+)

Expression


Co-expression Network