AMCG00006653


Basic Information

Item Value
gene id AMCG00006653
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 13036673 ~ 13037830 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006653
ATGATCGCAGCGTTTGGAAATGAAAACCCCGAGCCGAAAACGGTGATCAACCCAGAGGGACCCTCTCCATCCTCCCCGGACGACGAGCCGCTGTTCATCCGCAACACTTCCTTCAGGAGGACCTCCACGGGCAGCGGCCACCCGGAGGACAGCAGCACCAAGCCCCTGGTCTCCAccgcggcggcggcggcggcgtaCATCATGACCTCGGGGGAGTTCCTGCAAGCCGCTCCCCTGTTCGTCCGGAGGTCCAAGCGCAATCTCTTCTACAAGATCCTGTGCTTCCTCACCCTCATCTTCCAGGGCGGCATCCTGGATTTCTACCTGATCGTCTTCACCGATCTCTACTGGTGCTCCTGGATCGCCACCGACCTGGTGGTCATGACCGGCTGGGGCATCTTCTTCCTCAAGAACGGCCGGAGCAAGCGCAGCCTCCAGCACCACAAGGGCTCCATGTACGGCTGCAGCCTGGGCGAGTTCACCTTCGCCTACCTGGCCTGGCTCATCTACGTGATCGCCTGCACGCCCAAAGTGGTCCTGATCTTGGAGACCTCCATCCTGGATCTGATCGAGCTGAAGGTGCCTCTGGGGACCACGGGGTTTAAGATCATCATGATGCTCTCGGCGCCTCTGCTCTACTGCCTGATCAATGCCATCATAGAGGATCTAGCCGGCGCCACACGCTACCACTCCCAGAGCTGCTACATCAGCACCTGCCTGGACCTTGTGGACAGCTTTACCCTGATCGAAATGCTGCTGATGAACGAGATCCCCACGGTCTACCTGAAGTACACCGTGATCGCCGTGTACTTCCTCGTCCTGAGCATCCCGGTGCTGTGGCTGTACGAGCTCAACGCGTCCCAGCTGCAGTGCCGGTGGATCTGGGCCCGGTTCTTCTCCGGGGTCCTGGTCAATGTCCCGTTGCTGGTGGTGCGGTGTTTCCTTGTGTACTCCTACCAGATGCCCGTGTCCGTGTTCATGTTCAAGAACATGTTCTTCCTGGGCTGCCGGTGCCTGGAGCTGGTGGAGCAATGCTTAATGGGCAGCGGGGGCGGGAGGTTAGCCAGCAACCCGGTGCAGTTCTCGCACTGCGTCTCCGAAAACGACATGTGCCCGCATGGCTATGTCAACACACTGGCCGTCAGCACTCAGAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006653 True 1158 mRNA 0.60 1 13036673 13037830

Neighbor

gene id symbol gene type direction distance location
AMCG00006650 mkrn1,LOC107757257,LOC107549191,LOC107694290,LOC107725576 coding upstream 1239 13015653 ~ 13035434 (+)
AMCG00006645 tmem178b,LOC106576670 coding upstream 82238 12938326 ~ 12954435 (+)
AMCG00006646 tmem178b,LOC107725619,LOC107694293,LOC107655552,LOC107757211 coding upstream 148437 12883776 ~ 12888236 (+)
AMCG00006640 LOC103371429,LOC103459365,LOC103382520,LOC101068332,LOC100696994 coding upstream 320508 12714480 ~ 12716165 (+)
AMCG00006638 kcna1a,LOC105912431,LOC105913409,LOC108279524,LOC103366871 coding upstream 383253 12651939 ~ 12653420 (+)
AMCG00006659 NA coding downstream 234667 13272497 ~ 13283101 (+)
AMCG00006656 LMO3,lmo3 coding downstream 245324 13283154 ~ 13324717 (+)
AMCG00006655 NA coding downstream 326769 13364599 ~ 13379831 (+)
AMCG00006665 LOC107594874 coding downstream 541763 13579593 ~ 13592716 (+)
AMCG00006666 NA coding downstream 570153 13607983 ~ 13609375 (+)
G111161 NA non-coding upstream 189171 12845923 ~ 12847502 (+)
G111148 NA non-coding upstream 265748 12759571 ~ 12770925 (+)
G111063 NA non-coding upstream 683310 12350757 ~ 12353363 (+)
G111008 crebl2,crbl2 non-coding upstream 1012124 12022810 ~ 12024549 (+)
G110930 NA non-coding upstream 1243138 11793168 ~ 11793535 (+)
G111240 NA non-coding downstream 316126 13353956 ~ 13357071 (+)
G111272 hmga2 non-coding downstream 420209 13458039 ~ 13502571 (+)
G111420 NA non-coding downstream 1098489 14136319 ~ 14137744 (+)
G111443 NA non-coding downstream 1273922 14311752 ~ 14312024 (+)
G111531 NA non-coding downstream 1590896 14628726 ~ 14632980 (+)
AMCG00006636 NA other upstream 384858 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 713395 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 3468397 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 4312607 8710750 ~ 8724066 (+)
G110445 NA other upstream 4859887 8175760 ~ 8176786 (+)
AMCG00006672 NA other downstream 895836 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 7899667 20937497 ~ 20944977 (+)
G112567 NA other downstream 8010506 21048336 ~ 21049038 (+)
G112600 NA other downstream 8105035 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 8227423 21265253 ~ 21304878 (+)

Expression


Co-expression Network