AMCG00006658


Basic Information

Item Value
gene id AMCG00006658
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 13353684 ~ 13357478 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006658
ataataataataataataataataataataatatgcatatcACACAAgagacatttccatttttaaaacaaagccaaagttcaactattttattattacgtTGCACAACCGAGTCCTCCACTATCCCACAATGCCAGCTGAGCGATACAGTGATCCTCCGCGGTGCTGTGCTTCGGCGAGGGAGGCTGCTTTCTCTGTGTGGGTCTCGACAGGCGGGTAGTGCACTCAGGACAGCGGCGAGATGGCAGAGATATCCCAGATGATCGACAGTGAGGTGTTCCTGGCCTTCACCAGCTATGCTACCATTGTGATCCTGAAGATGTTGCTCATGGGACCCATAACCGCTTACTTCCGTTTCTCAAGAAAgGTTTTTGCTAACCCTGAAGACGTTTCTCTCAAAAGCAAGAAATTGGAGGACCAAAAGAAGATGCTCCGCATAGATCCGGATGTTGAACGCGTTAGGAGATGCCACCTGAATGACATGGAGAGCATTTTGCCCTTTGTGCTCATCGGACTATTGTACGCCCTGACCGGTCCGGACCTCCGCACTGCCCTGCTCCATTTCCGTATCTTTGTTGGTTCCAGGTTCTTCCATACTATTGCCTATTTGACCCCCCTGCCCCAGCCTAGCAGGGCATTGGCTTGGGTGGTTGGCATGGGGGCCACAATTTCCATGGCATACAGGATCCTTAGCACAGGATTGTACCTGTGAGCAGCAACACTGTGAACACAGCACCCCACGGCTGGGCATGAGAGCTCCGCTCAGCCACCTGCTTTCCtagtgattttttgttttttttagctcCAGCACTCGCAGTATTCCCTTCACGAATCAGGGGCGACTCGTTCTGCACTTTAAGGCATCATGAGCTCCTGTGCATTAGTGAGGCCGATGTCAGGCAGTAAAATGTAGCTGTTGGATTCTTCACTGAACTGCCATTTTCGAAACTTTAAGCCATATGGGTCGACAACAGAAGTGTCCACGACTTTTGTGGTGTGTAAACCTAAGaaatttaaagcaaattaatgtgttttctatTATGAATACAAGCAAAGTGGAGCCCAGTGTTCAAACactttttaataaagttttctacattcacatttcaaatgttgatttttattttgcagcattttACAGGTAGAATACGATCCCTCTGtgcatatttgtgttgttgGGTTTGGGTTCTTCAATAATCCCCATGTTTAATTATGCTTAAATCTACAGAATGCCTTTAAGGTATGGCCTATCTTGTGTGTCAAGCATCAATGATTATCAGTCATGTATTTGATCATTTGCAGAAGCATCACTTGAGTATAAGATCAGCAGTTGGAAGATGATAATCAATCCTTGGATTTCAG

Function

GO: NA

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006658 True 1362 mRNA 0.44 4 13353684 13357478

Neighbor

gene id symbol gene type direction distance location
AMCG00006654 NA coding downstream 212537 13087455 ~ 13141147 (-)
AMCG00006652 rergl,rergla,LOC107560713,LOC107757225,LOC107594299 coding downstream 291756 13056888 ~ 13061928 (-)
AMCG00006651 NA coding downstream 304364 13041100 ~ 13049320 (-)
AMCG00006648 NA coding downstream 329662 12998449 ~ 13024022 (-)
AMCG00006649 NA coding downstream 362303 12990803 ~ 12991381 (-)
AMCG00006657 dera,LOC107725660,LOC107655558,LOC107587132,LOC107694244,LOC107757227,LOC107594694 coding upstream 35427 13392905 ~ 13405015 (-)
AMCG00006660 NA coding upstream 57261 13414739 ~ 13417932 (-)
AMCG00006661 NA coding upstream 171897 13529375 ~ 13532102 (-)
AMCG00006664 NA coding upstream 182120 13539598 ~ 13550291 (-)
AMCG00006662 LOC106576661 coding upstream 202979 13560457 ~ 13573463 (-)
G111182 NA non-coding downstream 394056 12954610 ~ 12959628 (-)
G111158 NA non-coding downstream 592848 12759571 ~ 12760836 (-)
G110957 NA non-coding downstream 1451516 11899963 ~ 11902168 (-)
G110942 NA non-coding downstream 1557342 11794536 ~ 11796342 (-)
G110940 NA non-coding downstream 1560183 11790052 ~ 11793501 (-)
G111389 NA non-coding upstream 646275 14003753 ~ 14004141 (-)
G111421 NA non-coding upstream 778850 14136328 ~ 14137746 (-)
G111448 rap1b,LOC106576640,LOC107695907 non-coding upstream 810653 14168131 ~ 14214816 (-)
G111451 NA non-coding upstream 825303 14182781 ~ 14299856 (-)
G111466 slc35e3,LOC106609860,LOC106576641,LOC107737854,LOC107710682 non-coding upstream 887124 14244602 ~ 14246174 (-)
AMCG00006641 mrps33,LOC106591474 other downstream 475028 12876292 ~ 12878656 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other downstream 1213279 12137182 ~ 12140405 (-)
AMCG00006622 lrp6 other downstream 1223301 12071390 ~ 12130383 (-)
AMCG00006621 borcs5 other downstream 1284024 12049494 ~ 12069660 (-)
AMCG00006618 crebl2,LOC102781596 other downstream 1329135 12017869 ~ 12024549 (-)
AMCG00006663 hmga2 other upstream 97954 13455432 ~ 13503228 (-)
G111489 NA other upstream 1002750 14360228 ~ 14364422 (-)
G111621 NA other upstream 1354539 14712017 ~ 14753970 (-)
G111767 LOC107575789 other upstream 2395343 15752821 ~ 15753235 (-)
AMCG00006719 NA other upstream 2523652 15881130 ~ 15896869 (-)

Expression


Co-expression Network