AMCG00006659


Basic Information

Item Value
gene id AMCG00006659
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 13272497 ~ 13283101 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006659
ATGAGACTTAGTGCAACCAGTAAAGTTAATGCTTATAAACTAGCAGAGGCTTCTAAGGGCTCGGGCTCGGGCTCGTCTGTGATAAAGCTACACCGCCCCGTGCTCCGTCCCTCAGTCAGCGGTGGGCGAGTTGCGCGGAGCCCCCCCATCCCAATCGCTGTAGTGTGCACGGGAAGCCCGGCGCCGGCGGAGCGGCACACACCTGTAGCTCGGCTTGGCAAGAACGGCGCAAATCACTGGCTGCGGATGCCTGCGGAGCTCATTATTGCAAACCCAGAGCTCTCCCCGGGCGATGCCGGCGTTGTGAACTTTGGCtgtgaagggagagagagggtcgACGCGGCACTACGGTCCCCTGTCTTGGACTGGGTCCTTTTGCATTACTTGGCAAAGAAGCCAAAAGGTTGTGCTGGCTGCAACCGAAAAATCAAAGACCGCTACCTTCTCAAGGCACTGGACAAGTACTGGCATGAAGACTGCTTGAAGTGCGCCTGCTGTGACTGCCGGCTGGGGGAGGTGGGCTCCACACTCTATACCAAAGCCAACCTCATCCTCTGCCGGCGGGACTATCTACGGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006659 True 579 mRNA 0.58 4 13272497 13283101

Neighbor

gene id symbol gene type direction distance location
AMCG00006653 NA coding upstream 234667 13036673 ~ 13037830 (+)
AMCG00006650 mkrn1,LOC107757257,LOC107549191,LOC107694290,LOC107725576 coding upstream 237063 13015653 ~ 13035434 (+)
AMCG00006645 tmem178b,LOC106576670 coding upstream 318062 12938326 ~ 12954435 (+)
AMCG00006646 tmem178b,LOC107725619,LOC107694293,LOC107655552,LOC107757211 coding upstream 384261 12883776 ~ 12888236 (+)
AMCG00006640 LOC103371429,LOC103459365,LOC103382520,LOC101068332,LOC100696994 coding upstream 556332 12714480 ~ 12716165 (+)
AMCG00006656 LMO3,lmo3 coding downstream 53 13283154 ~ 13324717 (+)
AMCG00006655 NA coding downstream 81498 13364599 ~ 13379831 (+)
AMCG00006665 LOC107594874 coding downstream 296492 13579593 ~ 13592716 (+)
AMCG00006666 NA coding downstream 324882 13607983 ~ 13609375 (+)
AMCG00006668 NA coding downstream 339893 13622994 ~ 13634454 (+)
G111161 NA non-coding upstream 424995 12845923 ~ 12847502 (+)
G111148 NA non-coding upstream 501572 12759571 ~ 12770925 (+)
G111063 NA non-coding upstream 919134 12350757 ~ 12353363 (+)
G111008 crebl2,crbl2 non-coding upstream 1247948 12022810 ~ 12024549 (+)
G110930 NA non-coding upstream 1478962 11793168 ~ 11793535 (+)
G111240 NA non-coding downstream 70855 13353956 ~ 13357071 (+)
G111272 hmga2 non-coding downstream 174938 13458039 ~ 13502571 (+)
G111420 NA non-coding downstream 853218 14136319 ~ 14137744 (+)
G111443 NA non-coding downstream 1028651 14311752 ~ 14312024 (+)
G111531 NA non-coding downstream 1345625 14628726 ~ 14632980 (+)
G111197 NA other upstream 229049 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 620682 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 949219 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 3704221 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 4548431 8710750 ~ 8724066 (+)
AMCG00006672 NA other downstream 650565 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 7654396 20937497 ~ 20944977 (+)
G112567 NA other downstream 7765235 21048336 ~ 21049038 (+)
G112600 NA other downstream 7859764 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 7982152 21265253 ~ 21304878 (+)

Expression


Co-expression Network