AMCG00006660


Basic Information

Item Value
gene id AMCG00006660
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 13414739 ~ 13417932 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006660
ATGATGACCTTTTGTATTGTCCTCCCCTCTCTCAGCTCCTGCCCAAGGAGGGGAACTGCTTTTGCCCGGTGGAGAGCTGTCAGGAAGCGGCTCTTCAGATCCGGGCCCAGCTCCAGCTGGCCGCAGCGGATTCAGTGGCTTGTGGCTAAAGCACGGAAGTCGCGGAGTGgaaaattgaagaaaaagaGTAAGAGGAAGTTGCCGCGACAGGACGTTGCAGCCACAGGACGTGAGGCCGCAGGGGGCGAAGTTGACTCTGGCAGCAGCATCTTCCCATTGGAGGATGGGATCAGCAGCGAGGACCTCTCGCAAAACACAGGGCTGTCCAGTCCGTTGCCTGAGAGCAAGGAGGACCTGCTCATCGTCTGGGAGATGGAGGTTCCCCAGtatgcaGTTGGGCGGCTCATTGGAAAGTACTGGAGACACATGAAGTACATGAAGCGGTGCTCAGGGATTTCCAAAATCGACTTCTTGAGACTGCCTGACACCCAGGAGTTCCAGATCTGCCACATCGAAGgTACACAGGAGCAGGTGGACAAAGTCCTCACAGTGATTCACGAGAGGTTTCCAAAGCTGGACCTTACCAACATCTCCGCGCCTCCGCTGCCGACGCTGCCAAGTAGTCCTGGCTCCTGCGCATTGGAGGTCGGGATCGGGAGTGAGGACCTCCCACAGAGCACAGGCCTGTCCTGTCCATTGCCTGAGAGCAAGGAGGACCTGCTCATCGTCTGGGAGATCGAGGTTCCCCAGtatgcAATTCCACGTCTCATCGGAAAGCACTGGAGACACATGAAGTACATGAAGCGGTGCTCAGGGATTTCCAACATCGACTTCTTGAGACTGCCTGACACCCAGGAGTTCCAGATCTGCCACATCGAAGgTACCCAGGAGCAGGTGGAGACAGTCCTCACGGTGATTGGTAGGAGGTTTCCAGAGCTGGATCTTGCCAACGTCTATGCCCCTCCTCCGCTGCAGCCACCGCAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006660 True 987 mRNA 0.57 6 13414739 13417932

Neighbor

gene id symbol gene type direction distance location
AMCG00006657 dera,LOC107725660,LOC107655558,LOC107587132,LOC107694244,LOC107757227,LOC107594694 coding downstream 9724 13392905 ~ 13405015 (-)
AMCG00006658 NA coding downstream 57261 13353684 ~ 13357478 (-)
AMCG00006654 NA coding downstream 273592 13087455 ~ 13141147 (-)
AMCG00006652 rergl,rergla,LOC107560713,LOC107757225,LOC107594299 coding downstream 352811 13056888 ~ 13061928 (-)
AMCG00006651 NA coding downstream 365419 13041100 ~ 13049320 (-)
AMCG00006661 NA coding upstream 111443 13529375 ~ 13532102 (-)
AMCG00006664 NA coding upstream 121666 13539598 ~ 13550291 (-)
AMCG00006662 LOC106576661 coding upstream 142525 13560457 ~ 13573463 (-)
AMCG00006669 tmbim4,LOC107757272,LOC107587136,LOC107567270,LOC107694279 coding upstream 192341 13610273 ~ 13616189 (-)
AMCG00006670 grip1 coding upstream 250826 13668758 ~ 13726429 (-)
G111182 NA non-coding downstream 455111 12954610 ~ 12959628 (-)
G111158 NA non-coding downstream 653903 12759571 ~ 12760836 (-)
G110957 NA non-coding downstream 1512571 11899963 ~ 11902168 (-)
G110942 NA non-coding downstream 1618397 11794536 ~ 11796342 (-)
G110940 NA non-coding downstream 1621238 11790052 ~ 11793501 (-)
G111389 NA non-coding upstream 585821 14003753 ~ 14004141 (-)
G111421 NA non-coding upstream 718396 14136328 ~ 14137746 (-)
G111448 rap1b,LOC106576640,LOC107695907 non-coding upstream 750199 14168131 ~ 14214816 (-)
G111451 NA non-coding upstream 764849 14182781 ~ 14299856 (-)
G111466 slc35e3,LOC106609860,LOC106576641,LOC107737854,LOC107710682 non-coding upstream 826670 14244602 ~ 14246174 (-)
AMCG00006641 mrps33,LOC106591474 other downstream 536083 12876292 ~ 12878656 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other downstream 1274334 12137182 ~ 12140405 (-)
AMCG00006622 lrp6 other downstream 1284356 12071390 ~ 12130383 (-)
AMCG00006621 borcs5 other downstream 1345079 12049494 ~ 12069660 (-)
AMCG00006618 crebl2,LOC102781596 other downstream 1390190 12017869 ~ 12024549 (-)
AMCG00006663 hmga2 other upstream 37500 13455432 ~ 13503228 (-)
G111489 NA other upstream 942296 14360228 ~ 14364422 (-)
G111621 NA other upstream 1294085 14712017 ~ 14753970 (-)
G111767 LOC107575789 other upstream 2334889 15752821 ~ 15753235 (-)
AMCG00006719 NA other upstream 2463198 15881130 ~ 15896869 (-)

Expression


Co-expression Network