AMCG00006666


Basic Information

Item Value
gene id AMCG00006666
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 13607983 ~ 13609375 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006666
CAAAACGCAAGCATGCCATCTGGTGTTGGTATTTGGCATGGCTTTCAGCTCAGAATAAATACCCAAAACATTTTCTTGCTCATTTCCTGTTTTCTATGGCTTCCCAGGACCGGCCGAGAGCTCTGCGATCCCTGGACTCCTCCGTGCCCACTTACGTGTCTTTCGTCAATAAGTGTGGCCGGGACGCCGCAGCATGGTGGCTTAACTTCAGCGGAGACCCCACTTCCTACGGCATCATCAAACCCGGCACCGCACTGGCAATGAACACCTACATCACCCACCCATGGGTGTTTCGTGTCTCGGACAGTGGTGCAAAACTGCTTGCAAACATGAAGGAAGTTTACTTTCCTGAAGCCACCGATTTCCAGGATGGTGAGCCCGTGTTTCTGCAGGTGATGATCACCCCCCCAGTATACTCTTTACAGGAATACTGCCTAATGTTGATACGGAGACTGGTGAAGAAAAGGGATTACAGCAAATTGGACATTACAGCATCCCTAAAGAAGGACCTCCACGAGCTCCCAGATTTACAAAGGGAACTGACATGCCTGAACACAGCTTTTCAGGCGATGGACTGAAACAAATCTGCACACTTTTCATTCCCTAAAAAAGGCCACATTTACTGCACAGATATCTCCAGGGACCACTTGATTTAATCTTCAGATCTGAGCTGATTCACATATgtctttttaaactgtaattttatatttattgccaCAGAGTGTAATGAAACAGGTGCCTTCACTGAATATGAACATATGTACTAATaaccaataaaaataatgtatcaacAA

Function

GO: NA

KEGG:

id description
K03871 VHL; von Hippel-Lindau disease tumor supressor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006666 True 794 mRNA 0.45 3 13607983 13609375

Neighbor

gene id symbol gene type direction distance location
AMCG00006665 LOC107594874 coding upstream 15267 13579593 ~ 13592716 (+)
AMCG00006655 NA coding upstream 228152 13364599 ~ 13379831 (+)
AMCG00006656 LMO3,lmo3 coding upstream 283266 13283154 ~ 13324717 (+)
AMCG00006659 NA coding upstream 324882 13272497 ~ 13283101 (+)
AMCG00006653 NA coding upstream 570153 13036673 ~ 13037830 (+)
AMCG00006668 NA coding downstream 13619 13622994 ~ 13634454 (+)
AMCG00006667 NA coding downstream 30764 13640139 ~ 13668688 (+)
AMCG00006671 cand1,LOC107694273,LOC107571724,LOC107587138,LOC107655592 coding downstream 297198 13906573 ~ 13927886 (+)
AMCG00006674 dyrk2,LOC107757277,LOC107573871,LOC107694272,LOC107587139,LOC107655591 coding downstream 368362 13977737 ~ 13986188 (+)
AMCG00006680 NA coding downstream 596746 14206121 ~ 14221251 (+)
G111272 hmga2 non-coding upstream 105412 13458039 ~ 13502571 (+)
G111240 NA non-coding upstream 250912 13353956 ~ 13357071 (+)
G111161 NA non-coding upstream 760481 12845923 ~ 12847502 (+)
G111148 NA non-coding upstream 837058 12759571 ~ 12770925 (+)
G111063 NA non-coding upstream 1254620 12350757 ~ 12353363 (+)
G111420 NA non-coding downstream 526944 14136319 ~ 14137744 (+)
G111443 NA non-coding downstream 702377 14311752 ~ 14312024 (+)
G111531 NA non-coding downstream 1019351 14628726 ~ 14632980 (+)
G111562 NA non-coding downstream 1126827 14736202 ~ 14737639 (+)
G111629 NA non-coding downstream 1185343 14794718 ~ 14794949 (+)
G111197 NA other upstream 564535 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 956168 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 1284705 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 4039707 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 4883917 8710750 ~ 8724066 (+)
AMCG00006672 NA other downstream 324291 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 7328122 20937497 ~ 20944977 (+)
G112567 NA other downstream 7438961 21048336 ~ 21049038 (+)
G112600 NA other downstream 7533490 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 7655878 21265253 ~ 21304878 (+)

Expression


Co-expression Network