AMCG00006676


Basic Information

Item Value
gene id AMCG00006676
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14130780 ~ 14133087 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006676
ATGAAAGGGGTAACTAACCAGTACAAGCCTAACAGATTATTGCAATCTTTTCTTGCTGCCTGGACAGACACTGATCTTATCATGAAGtgtgctgttgttgctgtgtttggACTCGTCTGCTGTCTGCTGGGTGGCATCTCTGCTCATAGCATCGgcatgaaacacaaacaaaaggccGGGGTCGTCCTGAGCCCCCCACTGGGCAACGCTCTGCACCGGCAGCGCGTCAACGAACTGGCCAGAGCGGCACAGCAGCTCGATAAAGACACAGAAACCAGACTGCTAAATCTCCCCAAGAACCACACAGATATGACGAACCTGTTCGTTTGCTGCCTGCACGTGAATATTATTGACTTCTACCTCCGGAACGTGCTGAACACAGAGGAGAAGTACCCGCATCTCACTGTGGTGAAACAGGACCTGCACCGCATCAGTACGGACTTGAAAGAGCAAGGCTGTgcggTTACTCATGTCAGGAACCAACAGTATGTCCAAAAATTCAAAGAAGAATACATCAAGCTAGGGACGAACGGGCAGAGAAAAGCAATAGGAGAGGTTGACATCCTCTTTGAGTACCTCTCAAGATtctgcaaagaaaagaaaactcagTAAAGAAGAGGACTTGCTTTTTCTTCATAATGAATTGTCATTAATGAATTGTCCTGTGGTATCGCTATTTATACTtcattgaaagaaagaaaaacaatcttaaCATTATCAtatgaacacattttatattttaaggtaACCCTGAAGCTTTAGTATTAAGCATGagtaaatgcattgtaaaagcattattaaaactattatatGTGTCATCTTTATACAAAGAAAACTTATTTaagttataatttatttgaagagttttaatttaatataaattaaatgtatttatttgttctgtattatattttgttcttaatgTTGAATTGCTTTTATAATACAATGCTTTGCACAAGtagtgtttaatgcactgtaCACATTGTGTTAGAAATACCGGAGATGATAGTGCTAAAGAACACTTGTTCAGGAATGTGCCTTATTGTCACTTATTATGAtcagaatttgttttaattaaataaacaatttgatgTCAATACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006676 True 1101 mRNA 0.38 6 14130780 14133087

Neighbor

gene id symbol gene type direction distance location
AMCG00006675 NA coding downstream 7022 14120438 ~ 14123758 (-)
AMCG00006677 NA coding downstream 27710 14101422 ~ 14103070 (-)
AMCG00006673 NA coding downstream 166930 13957481 ~ 13963850 (-)
AMCG00006670 grip1 coding downstream 404351 13668758 ~ 13726429 (-)
AMCG00006669 tmbim4,LOC107757272,LOC107587136,LOC107567270,LOC107694279 coding downstream 514591 13610273 ~ 13616189 (-)
AMCG00006678 NA coding upstream 5978 14139065 ~ 14154332 (-)
AMCG00006681 NA coding upstream 119098 14252185 ~ 14270691 (-)
AMCG00006687 NA coding upstream 232555 14365642 ~ 14366487 (-)
AMCG00006690 LOC103382512 coding upstream 243241 14376328 ~ 14388386 (-)
AMCG00006695 NA coding upstream 453662 14586749 ~ 14632771 (-)
G111389 NA non-coding downstream 126639 14003753 ~ 14004141 (-)
G111182 NA non-coding downstream 1171152 12954610 ~ 12959628 (-)
G111158 NA non-coding downstream 1369944 12759571 ~ 12760836 (-)
G110957 NA non-coding downstream 2228612 11899963 ~ 11902168 (-)
G110942 NA non-coding downstream 2334438 11794536 ~ 11796342 (-)
G111421 NA non-coding upstream 3241 14136328 ~ 14137746 (-)
G111448 rap1b,LOC106576640,LOC107695907 non-coding upstream 35044 14168131 ~ 14214816 (-)
G111451 NA non-coding upstream 49694 14182781 ~ 14299856 (-)
G111466 slc35e3,LOC106609860,LOC106576641,LOC107737854,LOC107710682 non-coding upstream 111515 14244602 ~ 14246174 (-)
G111452 NA non-coding upstream 157380 14290467 ~ 14295549 (-)
AMCG00006663 hmga2 other downstream 627552 13455432 ~ 13503228 (-)
AMCG00006641 mrps33,LOC106591474 other downstream 1252124 12876292 ~ 12878656 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other downstream 1990375 12137182 ~ 12140405 (-)
AMCG00006622 lrp6 other downstream 2000397 12071390 ~ 12130383 (-)
AMCG00006621 borcs5 other downstream 2061120 12049494 ~ 12069660 (-)
G111489 NA other upstream 227141 14360228 ~ 14364422 (-)
G111621 NA other upstream 578930 14712017 ~ 14753970 (-)
G111767 LOC107575789 other upstream 1619734 15752821 ~ 15753235 (-)
AMCG00006719 NA other upstream 1748043 15881130 ~ 15896869 (-)
G112059 NA other upstream 3499804 17632891 ~ 17633445 (-)

Expression


Co-expression Network