AMCG00006677


Basic Information

Item Value
gene id AMCG00006677
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14101422 ~ 14103070 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006677
CAATCCAACAATCCACGGCTGGTGGAAGGAGGTGCTATATTTACCAACGTCCTGAAGACATTCGAAAAACAGGAAAGCGAGGAAAAATTACTGCTGAATGAAATACTGAATTTGTATATTGACATCTTTAACAATATGGACAACCCCCCCGAAAACCCGAAATTACGCCAAAGCATTGATCATATAAAGATACGTCTGGGAGACctgaagaaaaatgcattcCTGGATAATGCATCACTCAACCTGAAGAACAAGCTACAGGAGCTGTGGGAAATTAAGGTGAATGACCCAGTTGTGCAGCGCAAAGCTGTGTTTGAACTGAAGCCGGTGTTACTAAAAGCTCTGGATATTCAAAAGAAAGTTCATGAGAAGATGGAAAAAAAGCGAAAGAGAAGGCATGCTAGGCTTTCGCAGAGAAGAACATCATTAATGCATTGA

Function

GO:

id name namespace
GO:0042742 defense response to bacterium biological_process
GO:0006955 immune response biological_process
GO:0009615 response to virus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006677 True 438 mRNA 0.41 3 14101422 14103070

Neighbor

gene id symbol gene type direction distance location
AMCG00006673 NA coding downstream 137572 13957481 ~ 13963850 (-)
AMCG00006670 grip1 coding downstream 374993 13668758 ~ 13726429 (-)
AMCG00006669 tmbim4,LOC107757272,LOC107587136,LOC107567270,LOC107694279 coding downstream 485233 13610273 ~ 13616189 (-)
AMCG00006662 LOC106576661 coding downstream 527959 13560457 ~ 13573463 (-)
AMCG00006664 NA coding downstream 551131 13539598 ~ 13550291 (-)
AMCG00006675 NA coding upstream 17368 14120438 ~ 14123758 (-)
AMCG00006676 NA coding upstream 27710 14130780 ~ 14133087 (-)
AMCG00006678 NA coding upstream 35995 14139065 ~ 14154332 (-)
AMCG00006681 NA coding upstream 149115 14252185 ~ 14270691 (-)
AMCG00006687 NA coding upstream 262572 14365642 ~ 14366487 (-)
G111389 NA non-coding downstream 97281 14003753 ~ 14004141 (-)
G111182 NA non-coding downstream 1141794 12954610 ~ 12959628 (-)
G111158 NA non-coding downstream 1340586 12759571 ~ 12760836 (-)
G110957 NA non-coding downstream 2199254 11899963 ~ 11902168 (-)
G110942 NA non-coding downstream 2305080 11794536 ~ 11796342 (-)
G111421 NA non-coding upstream 33258 14136328 ~ 14137746 (-)
G111448 rap1b,LOC106576640,LOC107695907 non-coding upstream 65061 14168131 ~ 14214816 (-)
G111451 NA non-coding upstream 79711 14182781 ~ 14299856 (-)
G111466 slc35e3,LOC106609860,LOC106576641,LOC107737854,LOC107710682 non-coding upstream 141532 14244602 ~ 14246174 (-)
G111452 NA non-coding upstream 187397 14290467 ~ 14295549 (-)
AMCG00006663 hmga2 other downstream 598194 13455432 ~ 13503228 (-)
AMCG00006641 mrps33,LOC106591474 other downstream 1222766 12876292 ~ 12878656 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other downstream 1961017 12137182 ~ 12140405 (-)
AMCG00006622 lrp6 other downstream 1971039 12071390 ~ 12130383 (-)
AMCG00006621 borcs5 other downstream 2031762 12049494 ~ 12069660 (-)
G111489 NA other upstream 257158 14360228 ~ 14364422 (-)
G111621 NA other upstream 608947 14712017 ~ 14753970 (-)
G111767 LOC107575789 other upstream 1649751 15752821 ~ 15753235 (-)
AMCG00006719 NA other upstream 1778060 15881130 ~ 15896869 (-)
G112059 NA other upstream 3529821 17632891 ~ 17633445 (-)

Expression


Co-expression Network