AMCG00006681


Basic Information

Item Value
gene id AMCG00006681
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14252185 ~ 14270691 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006681
GTCTCTCACAACTGGATGATGTTTCTCCTCTTACTGTGCGTCTGCTTTGGGACCCTGACTTCATCGGTCTTGGGGCTGGACTTCCGGTACCAGAACACCAGAGAAGTAGAAGAATATTTGAAAGCCGTGAATAAAAATTATTCTTCCATCACATACCTACATAGTATTGGAAAGTCTGTAGAAGGCAGGGATCTCTGGGTACTGGTTCTGGGAAAATTTCCATATGAACACAAGGTTGGGATTCCAGAATTTAAATACATCGCTAACATGCATGGCAATGAGCCCGTGGGGAGAGTGCTGCTGCTCCATCTCATAGACCATCTGACATCCAACTACAACACTGACCCCACCGTCACCAGCATGATCAACAACACTCGCATCCACATCCTGCCCTCCATGAACCCGGACGGTTTCGAGTCCTCCCCCCGCAATTGCACCTATTCTGATGGAAGGTTCAACATGCACGGCGTCGACCTGAACCGGAACTTCCCCGATGCCTTCACGAAGGACAGCAGCCCCCAGGAGCCGGAGGTGCGGGCAGTGATGGACTGGGTGCGTTCGGAGCCCTTCGTCCTGTCTGCCAACCTGCACGGTGGAGCGGTGGTCGCCAGCTACCCCTATGACAACAGCAATGGAGGAGCTGAACTGCAGGGTGGTGCCAGTGTGTCCCCAGACAACGATGTGTTTGTGCACCTGGCAAAGACATACTCCTACAACCACTCCGACATGTACAAAGGGAACCTCTGTAACTACCAGTTTTTCAAAGACGGAATCACAAACGGATTCCAGTGGTACGCTTTACAAGGAGGCATGCAGGACTATAACTATGTCTTTGGCCAGTGCTTGGAAATCACTCTGGAGGTGTCTTGCTGCAAGTACCCCAACGAGGACAAACTCTCAGGACTGTGGGCCGCCAACAAGGCTGCCCTGCTGGCGTACATGCAGCAGGTCCACCTGGGGGTGAAAGGACAGGTATTTGACTCCCGCGGTGTCCCTGTCCAGAATGCCTTGGTGGCAGTGGAGGGCAGACAAAACCTCTGTCCTTTCAAAACGGATACAAATGGCGAATACTACAGGCTTCTCTTACCTGGCAATTACACGTTAAAGGTTACAGTGCCCGGTCAGGCCCCGATCACAGAGAGCTTGCAGATCCCAGACGGGACGTCGAAATTCTCCGCCCTCAAGCgtgattttgtttctctgagTCCCAGCATCAGGCCCGACACCTCTGACCCCACCGCAGCCTGCACCTCTCTGATAAGGAGTGCGTATGACAGCAATAGCAGCGTTGCCCTACTGTACGCATGGCTCTCCCACCTCCTCTTCCTGACGTTCTGCACCCTGCTGCTGTGA

Function

GO: NA

KEGG:

id description
K01296 CPM; carboxypeptidase M

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006681 True 1353 mRNA 0.53 8 14252185 14270691

Neighbor

gene id symbol gene type direction distance location
AMCG00006678 NA coding downstream 97853 14139065 ~ 14154332 (-)
AMCG00006676 NA coding downstream 119098 14130780 ~ 14133087 (-)
AMCG00006675 NA coding downstream 128427 14120438 ~ 14123758 (-)
AMCG00006677 NA coding downstream 149115 14101422 ~ 14103070 (-)
AMCG00006673 NA coding downstream 288335 13957481 ~ 13963850 (-)
AMCG00006687 NA coding upstream 94951 14365642 ~ 14366487 (-)
AMCG00006690 LOC103382512 coding upstream 105637 14376328 ~ 14388386 (-)
AMCG00006695 NA coding upstream 316058 14586749 ~ 14632771 (-)
AMCG00006696 NA coding upstream 373916 14644607 ~ 14665799 (-)
AMCG00006698 NA coding upstream 538170 14808861 ~ 14818516 (-)
G111466 slc35e3,LOC106609860,LOC106576641,LOC107737854,LOC107710682 non-coding downstream 6011 14244602 ~ 14246174 (-)
G111448 rap1b,LOC106576640,LOC107695907 non-coding downstream 37369 14168131 ~ 14214816 (-)
G111421 NA non-coding downstream 114439 14136328 ~ 14137746 (-)
G111389 NA non-coding downstream 248044 14003753 ~ 14004141 (-)
G111182 NA non-coding downstream 1292557 12954610 ~ 12959628 (-)
G111452 NA non-coding upstream 19776 14290467 ~ 14295549 (-)
G111478 NA non-coding upstream 41036 14311727 ~ 14312024 (-)
G111481 NA non-coding upstream 66010 14336701 ~ 14374310 (-)
G111622 NA non-coding upstream 458280 14728971 ~ 14730469 (-)
G111626 NA non-coding upstream 462479 14733170 ~ 14734171 (-)
AMCG00006663 hmga2 other downstream 748957 13455432 ~ 13503228 (-)
AMCG00006641 mrps33,LOC106591474 other downstream 1373529 12876292 ~ 12878656 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other downstream 2111780 12137182 ~ 12140405 (-)
AMCG00006622 lrp6 other downstream 2121802 12071390 ~ 12130383 (-)
AMCG00006621 borcs5 other downstream 2182525 12049494 ~ 12069660 (-)
G111489 NA other upstream 89537 14360228 ~ 14364422 (-)
G111621 NA other upstream 441326 14712017 ~ 14753970 (-)
G111767 LOC107575789 other upstream 1482130 15752821 ~ 15753235 (-)
AMCG00006719 NA other upstream 1610439 15881130 ~ 15896869 (-)
G112059 NA other upstream 3362200 17632891 ~ 17633445 (-)

Expression


Co-expression Network