AMCG00006683


Basic Information

Item Value
gene id AMCG00006683
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14321024 ~ 14352438 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006683
ATGCTTTTTAAGCTTGCGTCATCAGTACTGTGGTGGGGCCATGATACCGTGAAGTATGACCGAAGTCCAGagaTCAAATGGTCTTCTAAAGAAGCCATGGGTAGCTGCTGTAGCTGTCCAGATAAAGAGTCTATCCCAGATAACCATCAAAACAAGTTTAAGGTAATAAACGTGGACGATGATGGGAACGAGCTGGGTTCCGGCATAATGGAGCTGACGGAGACGGAGCTTATCTTGCACACCCGGAGACGTGACGCTGTGAAATGGCCGTACCTGTGCCTCCGTCGATACGGCTACGACTCGAACCTCTTCTCCTTCGAGAGCGGGAGGCGCTGCCAGACTGGCCAAGgtatatttgcatttaaatgtgccCGGGCAGAGGAGATTTTCAACATGCTCCAGGAAATCATGCAGAATAACAGCATAAGTGTGGTGGAGGAGCCAGTGATGGAGAGAAACCACAACCAAACAGACGCCGACGTTCCCAGGACGCCTCGAACGCCAACTACCCCAGGTTTTGTATCCCCCAGTTTACCCAATGGGTGCCGGTACCCATCCTTTGGCGATACCTCCTCACGCCCCTCCAGCAGGCACCCCTCTGTAGGCAGTGCCCGTCTCCCGTCTGTGGGGGAGGAGTCAACGCATCCTCTGTTAGTCGCAGATGAGCCGgtCCACACGTACGTGAACACCACCGGGGTGCAGGAGGAGCGGCGTAGTCGCTCAAGTGACCACGCACCCCTGGAGCTGCGCCTCTCCAACCCAGAGAGCCTTGCCAGTGGGCCACTCGCCTCGCCCGACGACACCGAGCCCCAGGTCCTGCTGGAGCCGGAGGCAGTCAAATTTATCCTGGGCCCCACGCCCGTCCAGAGGCAGCTGATGGAGAAGGAGAAGCAGGAGAAGCCAGACCCGGAGCCCGACGGGGGCGGCGTTGTGCACGAAGCGCCCGTGCCCGTTGGTAGTGTCAACGGTGGTGTGGCCACTGGCAGTACCAGCACCAACCCTGCGGACTGGGACACTGGCTACGACAGCGACGAGCGCAAGGACGGCCCTCCAAGCAACAAACTGGTGTACGAGAACATCAATGGTTTGGCTTTGCCCAGCGCTCCACCTGCCCGCCGGAACAGAGCACCTATCCCCACCCCAACCAGCGCAGACCCTCTGAACGCCAACAACTCTGCGCAGAGGAGGACTGCCCTGCTGAACTATGAGAACCTGCCCTCCCTGCCTCCCGTCTGGGAAGCTCCTAAGCCCAGCAAGGAGGAGGAAGACGGTTTTGGACCAAAGACGCCATCTCTCAATGGTTACCACCACAACCTTGACCCCATGCACAACTATGTCAACACAGAGAATGTAACGGTACCCCTGAGCGCCCACAAACTGGACAGTGTGCGGCGCCGGGACTGCACCCCAACAGTATTTAACTTTGACTTCAGGCGCTCCAGCCTCGAGCACAGACAGCTAAACTACATCGAGGTGGAGATGGAGCGGGGCAGCGACTCGGACAATCCCCAGACCCCCAAAACCCCAACGACTCCCCTTCCGCAGACTCCCACCCGCAGGACAGAACTTTACGCAGTCATAGACATAGAGCGCACGGCCGCCATGTCTAGTTTGCAGAAAGCATTGCCACGCGACGATGGTACTTCAAGGAAAACGCGACACAATAGTACAGACCTGCCT

Function

GO: NA

KEGG:

id description
K12461 FRS2; fibroblast growth factor receptor substrate 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006683 True 1680 mRNA 0.58 7 14321024 14352438

Neighbor

gene id symbol gene type direction distance location
AMCG00006682 LOC106609801,LOC107717680 coding upstream 12452 14302226 ~ 14308572 (+)
AMCG00006686 cpsf6,LOC107729149 coding upstream 23047 14277475 ~ 14297977 (+)
AMCG00006679 slc35e3,LOC107710682,LOC106609860,LOC106576641 coding upstream 69077 14227387 ~ 14251947 (+)
AMCG00006680 NA coding upstream 99773 14206121 ~ 14221251 (+)
AMCG00006674 dyrk2,LOC107757277,LOC107573871,LOC107694272,LOC107587139,LOC107655591 coding upstream 334836 13977737 ~ 13986188 (+)
AMCG00006684 cct2 coding downstream 5527 14357965 ~ 14364176 (+)
AMCG00006685 NA coding downstream 17375 14369813 ~ 14376801 (+)
AMCG00006691 NA coding downstream 41608 14394046 ~ 14395217 (+)
AMCG00006689 NA coding downstream 73331 14425769 ~ 14441636 (+)
AMCG00006688 NA coding downstream 97828 14450266 ~ 14465886 (+)
G111443 NA non-coding upstream 9000 14311752 ~ 14312024 (+)
G111420 NA non-coding upstream 183280 14136319 ~ 14137744 (+)
G111272 hmga2 non-coding upstream 818453 13458039 ~ 13502571 (+)
G111240 NA non-coding upstream 963953 13353956 ~ 13357071 (+)
G111161 NA non-coding upstream 1473522 12845923 ~ 12847502 (+)
G111531 NA non-coding downstream 276288 14628726 ~ 14632980 (+)
G111562 NA non-coding downstream 383764 14736202 ~ 14737639 (+)
G111629 NA non-coding downstream 442280 14794718 ~ 14794949 (+)
G111635 NA non-coding downstream 456810 14809248 ~ 14811063 (+)
G111645 NA non-coding downstream 541361 14893799 ~ 14895938 (+)
AMCG00006672 NA other upstream 381549 13933666 ~ 13939475 (+)
G111197 NA other upstream 1277576 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 1669209 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 1997746 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 4752748 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 6585059 20937497 ~ 20944977 (+)
G112567 NA other downstream 6695898 21048336 ~ 21049038 (+)
G112600 NA other downstream 6790427 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 6912815 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 7265194 21617632 ~ 21622508 (+)

Expression


Co-expression Network