AMCG00006685


Basic Information

Item Value
gene id AMCG00006685
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14369813 ~ 14376801 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006685
GCCTTGGCACAGTGCACCTGTGGCAGTCTGACCTCAAACCCATGCCCAATACACTGCCCCTCAGAGTGACACACCGAGAGTCAGGGGAGATGAGCATGAAGCACCAACTCAGCATGAAGTGGATCATTGTGGCGTTCCTGTGCGCTCGTCCAGCCGCTGACTGTTTCACAAGGAGTGAGCTGCGGGCCACACAGCAGTTGGACAGCTTCCTAAGGGACCACCAGCCGGACGTGTTCGCTCGGAGATACTCTCAGTGCTACCCCACCCGGCTGCCGACCTCCAGCCTCAGGACCACCAGGGAAACACTGTACAACTTCATGGACGTAAGCCCGTATAAACAATACTGCACTGTCATTGATCCCCGACCGGCTCAGTATTACGGTGAATTGAGTATTGGGACCCCACCTCAGAACTTCACAGTGGTCTTTGACACCGGCTCATCAAACCTCTGGGTGCCCTCAGTGTACTGTGTCAGTGACGCCTGTAATACACACCGTAGATTCAGGTCCTTCGAATCCGCCACGTATAGTCACGGTGAGAAGACCTTCTCCATTCATTATGGCTCGGGACACCTTCTGGGTGTGGTGGCAATGGACATTTTGAAGGTAAAGACTACACTGGCCTTGATAGCTCTGAAATGTATAATCCAGGGCATGAGTGCTGCCCGCTTCAGCCAGCGACGGGTAGCCCAGCCCCAGGACGCCATCAAACTTAGCCAGGACGAAGGTGAAGCCCGGCTCAAACACAGACTCCCCAAACTCCTGGTGCAGGGGGAGATGGCGTTCTGTGCGTCTGGCTGCCAGGCCATCGTGGACACGGGCACCTCTCTCATCACCGGGCCCACGAAGCACATCCTGAAGCTGCAGGAGCTCATCGGGGCCACGCCGGCACTGCAGGGGGAGGTGAGGAGGAAGATCGCACTGCTCTGTCACTGGGGGTCTGCAGAAACCCGATCTTTTGACCAGATCGAAATGtttcaaattGACTGTGCCCGGCTGTCCAGCTTGCCCCAGGTGGAGTTCACCATCCAAGACGTGGAGTATAAGTTGGCTGCGGAGTCGTATGTGAGGAAGGAAATGGACGGAGGCAAGCACATCTGCTACAGTGGATTCCAGGCCGTGGACATCCACACTGCCTCCGGCCCCCTCTGGATCCTGGGGGACGTCTTCATCTCTGAGTTCTACAGTATCTTTGACCGGGGCAACGACAGGGTAGGGTTTGCACGCGCCTGGCATGGCAGTCCAGTGGCGCTG

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006685 True 1253 mRNA 0.57 8 14369813 14376801

Neighbor

gene id symbol gene type direction distance location
AMCG00006684 cct2 coding upstream 5637 14357965 ~ 14364176 (+)
AMCG00006683 NA coding upstream 17375 14321024 ~ 14352438 (+)
AMCG00006682 LOC106609801,LOC107717680 coding upstream 61241 14302226 ~ 14308572 (+)
AMCG00006686 cpsf6,LOC107729149 coding upstream 71836 14277475 ~ 14297977 (+)
AMCG00006679 slc35e3,LOC107710682,LOC106609860,LOC106576641 coding upstream 117866 14227387 ~ 14251947 (+)
AMCG00006691 NA coding downstream 17245 14394046 ~ 14395217 (+)
AMCG00006689 NA coding downstream 48968 14425769 ~ 14441636 (+)
AMCG00006688 NA coding downstream 73465 14450266 ~ 14465886 (+)
AMCG00006692 cnot2,LOC108275083,LOC105023108,LOC105901945,LOC108436929 coding downstream 137503 14514304 ~ 14541346 (+)
AMCG00006693 kcnmb4 coding downstream 172542 14549343 ~ 14573412 (+)
G111443 NA non-coding upstream 57789 14311752 ~ 14312024 (+)
G111420 NA non-coding upstream 232069 14136319 ~ 14137744 (+)
G111272 hmga2 non-coding upstream 867242 13458039 ~ 13502571 (+)
G111240 NA non-coding upstream 1012742 13353956 ~ 13357071 (+)
G111161 NA non-coding upstream 1522311 12845923 ~ 12847502 (+)
G111531 NA non-coding downstream 251925 14628726 ~ 14632980 (+)
G111562 NA non-coding downstream 359401 14736202 ~ 14737639 (+)
G111629 NA non-coding downstream 417917 14794718 ~ 14794949 (+)
G111635 NA non-coding downstream 432447 14809248 ~ 14811063 (+)
G111645 NA non-coding downstream 516998 14893799 ~ 14895938 (+)
AMCG00006672 NA other upstream 430338 13933666 ~ 13939475 (+)
G111197 NA other upstream 1326365 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 1717998 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 2046535 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 4801537 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 6560696 20937497 ~ 20944977 (+)
G112567 NA other downstream 6671535 21048336 ~ 21049038 (+)
G112600 NA other downstream 6766064 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 6888452 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 7240831 21617632 ~ 21622508 (+)

Expression


Co-expression Network