AMCG00006697


Basic Information

Item Value
gene id AMCG00006697
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14771451 ~ 14780474 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006697
gaaaacaggagacacttcttcacacagagagttattataatctggaacaaattcccagcgatgtggttgaagccacaatgtgggaacatttaaaaatagactgggtgtgatccttggatcatttagttattaatggaaaccaaacgagCTGATGGGTCGAGtggcctctcgtttgtaaactcttttatgtttttctgataTGTGTTCGTTATGACGTCAGGTGTTGTGAGTCGCGTACGTAACAGTCGCTGGAATTCGATTGTGTTGCTCTGTGGATTTCGCCTAATTAGCGCTGATAGTGAGTTTGTAGACGGAGCCGTACAGTGAATTGATTTTACCAACGAGTAATTTCAGTTTTACCGACAGTCTTTTGGttgtattgaattcaaaatatggCAGCTATTGCAGACTTCAAGTTTTGTATTGAAGACTCTGCAACTTTCAGGTAGGTCGCTTCAAATCTAtcgttttcttttcattgcagCAGGGTATGTATAGACTAcgtgtttttaaatgacattacaGTTAAAGTCTGCACacaatgtgaataataatgtttttcaccAGTACAAGATCGTGTGAATTGTTCCTAAGTGTGGGTGTGTAGCTACACATTGAACCATTATTCTCGTATATTGATTACTGTATGAGAGCATATGAAATATGCTGAAATGTTACTGTTTTACTCCATGAGACAAAGTAATGAATATAATGACTGTGGTGTATAGGcatataacttttttgttttctttttgtaatattttccatttttgtctaagctattaatattttctgatatctgttgagtaaaaaataaatctgggtCATTTAAACGTCGAATGTTAACAACAGATTTTGAGCCAACCCCTAAAGTgtattgctttcattatttCGTAATCCTCGGCACAACCAAGACTTCTGTGCAAATGTTGTTGCATTGATTTTATGTTGTAGGTGGAAATATACCCCTGACGAGAAGGAGAATGAGCGGCAGTTCCTGCTGGACTTACAGTTCATCTGTGACAAGCTGCAGAAACTCCGCATTAGCGATGTGGTCCTGGCTAAGgCCATAAATACCCCTGTGCATCGCCTGGACCCCAGTCAGCTGACAGGGATGAACTCTCTCCCTGACCTTACCCCCTCTCTTGCCAACCTTGGCAAACAGCCCATGGGGGGACATGGCCCAGGCTCTTTGCCCCCCCAGCCCTCAGCAAAGGGTGCCCGGTCCTCCTGGCAGGGCGAGAGGAAGGAGCCGCGAATCATCAACGTGTCATTCACATATGAGATTCAGCTCAACAAGGCCGAGAATGCCTGGAAGCCTACAATTAAGCAGGCTCCAACTGTGGGTGATGACCCCGAGGTCATTAAGACCCAGGAGCTGTTCCGCAGGGTGAACGGTATCCTGAACAAGCTGACCCCACAGATGTTCCAGCCTTTGATGCGTCAAGTGAACGAACTGACCATCGACACGGAGCAGCGACTCCAGGGTGTCATGGAGCTCATCTTCGAGAAGGCCATCTCCGAACCCAACTTCTCCGCCACATACGCCAATATGTGCCAGTGCCTTCTGAGGTTCAAAGTCCCAGCCGCTGACAAGCCGGGAGAGACGGTGCCTTTCCGCACTCTGCTTTTGAACCACTGCCAGCAGGAGTTTGAGACGGAGGAGGATGGAGACGAGGGCGAGGAGCGGCAGCGTCTATGTGACGAGCTGCAGGAGGCCAAGTGCAAGGCCCAGCGGCGCTCGCTAGGCAACATCAGGTTCATTGGGGAGCTGTTCAAGGTGAAGATGCTGGTGAAGAAAACCATGCACAATTGCATCGTCAAGCTGTTGAAGAACCACGAAGAGTCCCTGGAGTGCCTGTGCCGACTGCTCTCCACTATCGGCAAAGACCTGGACTTGGAGACCGCCAAGCCCCGCATGGACCAGTACTTCAGCCAGATGGAGCAGATCATCAAAGAGAGGAAGACCTCTCCTCGAATCCGCTTCATGCTGCAGGACGTCTTGGACCTGAGAAGAGATAACTGGGTGCCCAGGAGGGGTGACCAGGGTCCTAAGACAATCGACCAGGTCCACAAGGAAGCAGAGCTGGAGGCGCACCGTGAGCAGATCAAGGTGCAACAGCAGCTCATGAGCAAGAAGGACAACCGACGTGGGGGCCCTGGGGGGCCGCGCCCTGCAGCTCCTGAGTCTGGATGGCGCGCTACCGGCACCCTGAAGCGCTGCTCCACCCTGCAGCAATCGTCCTCCGCCGCTCCTTCCTCCGTTTTCAGGAGTAGCTCTCGCCGGGATGGCGGTGAGTGTAATAACCTCTTCAAGCAGCCGGAGCGTCACGAGCGCGGCCAGCGTGAACACTCAGAGAGGAGAGGCGCCGGGGATAAGAGCAGCCTGGACAGGATTGACTTGAAGAAGCCAAAGTCCATCATTGGGGAGTGTCTCCACCTCAATGACATGAAGCCCTCAGCAGTGGCTCCCCAGCGCTCccagcagggagagaggagggagcaGCGCAAGGTCATCACCCTGTCATTCTCACATGAGGTTCAGCTCAACAAGGCCGAGAAGGCCTGGAAGCCTACAATTAAGCAGGCTCCAACTGTGGGTGATGACCCCGAGGTCATTAAGACCCAGTTCAAAGTCCCGACCAATGACCAGCCGGGAGAGATGGTGACTTTCCGCACTCTGCTTTTGAACCGTTGCCTGAAGGAGTTTGAGATGGAGGAGGATGGAGACGAGGTCTtcaagaagaaacagaagatgCTGGATGCATCCTTGGGCGAGGAGCGGCAGCGTCTACGTGACGAGCTGCAGGATGCCAAGCACAAGGCTCAGTGGCGCTCGCTAGGCTACATAAAGTTCTTTGGGGAGCTGTTCAAGGTGAAGATGCTGACAGAGGCCATGATGCACGCCTGCATCTTCAAGCTGTTGAAGAACCACGAAGAGTCCCTGGAGTGCCTGTGCCGACTCCTCTCCACTATCGGCAAAGACCTGGACCTCCAGACAGCCAAGCCCCGCATGGACCAGTACTTCAGCCAGATGGAGCAGATCATCAAAGAGAGGAAGACCTCCCCTCGAATCCGCTTCATGCTGCAGGACATCTTAGACCTGAGAAGAGATAACTGGGTGCCCAGGAGGGGTGACCAGGGTCCTAAGACAATTGACCAGGTCCACAAGGAAGCAGAGCTGGAGGCGCACCGTGAGCAGATCAAGGTGCAGCAGCAGCTCATGAGCAAGAAGGACAACCGGCGTGATGCGAACTTCAGTGAAAGTGTCCTGTCACGCGTTGGTCGggccagagcagagcaggcCAGGAAGAGAGGGACTTTTGCGAAAGCACTAGAAATAGAAGCACCAGTCCTTCTCTGGCGAAGATGAAAGCATCAAGATATGATCATTAAAtttctttcccttctctgtttaatctacaaaataaaatgataatgttCTTCTGTTCAAACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006697 True 3459 mRNA 0.50 14 14771451 14780474

Neighbor

gene id symbol gene type direction distance location
AMCG00006694 NA coding upstream 195179 14574681 ~ 14576272 (+)
AMCG00006693 kcnmb4 coding upstream 198039 14549343 ~ 14573412 (+)
AMCG00006692 cnot2,LOC108275083,LOC105023108,LOC105901945,LOC108436929 coding upstream 230105 14514304 ~ 14541346 (+)
AMCG00006688 NA coding upstream 305565 14450266 ~ 14465886 (+)
AMCG00006689 NA coding upstream 329815 14425769 ~ 14441636 (+)
AMCG00006701 NA coding downstream 83340 14863814 ~ 14891825 (+)
AMCG00006700 tmem19,LOC106594838 coding downstream 150549 14931023 ~ 14937252 (+)
AMCG00006699 rab21,LOC106609839 coding downstream 167697 14948171 ~ 14963480 (+)
AMCG00006704 NA coding downstream 198219 14978693 ~ 15002282 (+)
AMCG00006703 tph2,LOC108263971,LOC108423504,LOC106561539 coding downstream 225838 15006312 ~ 15037025 (+)
G111562 NA non-coding upstream 33812 14736202 ~ 14737639 (+)
G111531 NA non-coding upstream 138471 14628726 ~ 14632980 (+)
G111443 NA non-coding upstream 459427 14311752 ~ 14312024 (+)
G111420 NA non-coding upstream 633707 14136319 ~ 14137744 (+)
G111272 hmga2 non-coding upstream 1268880 13458039 ~ 13502571 (+)
G111629 NA non-coding downstream 14244 14794718 ~ 14794949 (+)
G111635 NA non-coding downstream 28774 14809248 ~ 14811063 (+)
G111645 NA non-coding downstream 113325 14893799 ~ 14895938 (+)
G111666 NA non-coding downstream 159734 14940208 ~ 14942924 (+)
G111699 NA non-coding downstream 414820 15195294 ~ 15200003 (+)
AMCG00006672 NA other upstream 831976 13933666 ~ 13939475 (+)
G111197 NA other upstream 1728003 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 2119636 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 2448173 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 5203175 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 6157023 20937497 ~ 20944977 (+)
G112567 NA other downstream 6267862 21048336 ~ 21049038 (+)
G112600 NA other downstream 6362391 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 6484779 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 6837158 21617632 ~ 21622508 (+)

Expression


Co-expression Network