AMCG00006710


Basic Information

Item Value
gene id AMCG00006710
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 15720053 ~ 15726140 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006710
GATGTTGCATATATTCCTGCCAGTAAAGGATATCCTCGCTTTGGTCCCCCGGACTCCAGCTCTACAGTGAGCTGGGGAACTCCCCTGCCCGATGCCTCCAGGCAGcCTCCTCCATGGGAAGTAAAGACTGTCCCTGAGAATTTGCCAGCACCTTCGGATagatatcaaataaaatacaagcagTATGAAGCTGAGTTGAAGGAGAATTATAGGCAGCATTCACAGCGATTAAAGGACAAGAGCAAAACTGAGCCAGTGCTAAAGAATTCAGCCACAATTGCAACACAACCACAGAAGCTTCTTCTTAATGATGATGACCTGACAGCACTGGATGAAAAAGCCCTCCTACAGCAGAGTTACACCAGCAAACCTTACACCATCCAGCACAGCATGAGGAAACTGGAAGCTGTAAGTGCTTCTGATAGTCTATTCATGAGTCCAATCGAGCAAAGTGCAGCCGAACTGTGTCACCTGCTGACTGAAGACCTTGcagcagaaagaagaaaacaggcTGTTGTTGAGCAAGTCATGGTGGATCAGTTATCCAGAGCAGTTATAAGTGACCCTGAACAAAATTCAGCCTTCAATGAACAGAGTTCCTTACCTTTGACTGCATCGATACCCTTGCGATTCAGGAACAGAGCATTGCATGACACAAAGAATGGTCGTGATGCATGCAGAGAGCTGATTGGATTCTTCTTTACGTTTGATAAATCCTTAACAATATATGAATATCGTCACTTCGGAAGAAACAGAACAAATGCTCTTCCATTCATTCAAAAGGGATGTTATAGTCACCAATgtggaagaaagaaaggaatgcaATATGGAATTCATGACTTTTACATGGCaaaaACGTTGAAAGCAAAGTTAAGAAATAGAGGTGTTCGTACTCTTACGGGATTAGGAAAGCTCTGTAGAAATGCAGACAAGTCTAGTGATGGAGTTCTGCAGAAAGCAGAGATTCGTCAGGCTCTGAAGGAGTTTCACTTGACACTGTCTGATGAGGATTTTGAAGCTATTTGGCTGTTTCTGGACCAGAACTGTGATGGTCAAGTAGATTATGGGGAGTTCCTAAGAGCTGTCATTGGAGAGATGAGTGAATATAGAAAAGCATTAGTCAGAAAAGCCTATATGAAGCTTGACCCAAACAAGACTGGCACTGTTCCTATGACTGACATTGAAAAGTTCTACTGCGCCAAGGGTCATCCAAAAGTATTGTCA

Function

GO: NA

KEGG:

id description
K23909 CAPS; calcyphosin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006710 True 1224 mRNA 0.43 10 15720053 15726140

Neighbor

gene id symbol gene type direction distance location
AMCG00006708 NA coding upstream 1715 15713827 ~ 15718338 (+)
AMCG00006709 krr1,LOC107395694 coding upstream 36984 15674427 ~ 15683069 (+)
AMCG00006705 NA coding upstream 652431 15066888 ~ 15067622 (+)
AMCG00006703 tph2,LOC108263971,LOC108423504,LOC106561539 coding upstream 683028 15006312 ~ 15037025 (+)
AMCG00006704 NA coding upstream 717771 14978693 ~ 15002282 (+)
AMCG00006713 NA coding downstream 40971 15767111 ~ 15798662 (+)
AMCG00006721 zdhhc17,LOC102798393,LOC107708015 coding downstream 273256 15999396 ~ 16030884 (+)
AMCG00006724 NA coding downstream 608970 16335110 ~ 16345016 (+)
AMCG00006725 NA coding downstream 628310 16354450 ~ 16356424 (+)
AMCG00006726 NA coding downstream 651640 16377780 ~ 16425206 (+)
G111727 NA non-coding upstream 182212 15537429 ~ 15537841 (+)
G111726 NA non-coding upstream 243339 15476154 ~ 15476714 (+)
G111699 NA non-coding upstream 520050 15195294 ~ 15200003 (+)
G111666 NA non-coding upstream 777129 14940208 ~ 14942924 (+)
G111645 NA non-coding upstream 824115 14893799 ~ 14895938 (+)
G111764 NA non-coding downstream 16298 15742438 ~ 15742652 (+)
G111786 NA non-coding downstream 58379 15784519 ~ 15784762 (+)
G111788 LOC106576514 non-coding downstream 123781 15849921 ~ 15869801 (+)
G111898 NA non-coding downstream 988678 16714818 ~ 16722048 (+)
G111909 NA non-coding downstream 1053262 16779402 ~ 16810470 (+)
AMCG00006672 NA other upstream 1780578 13933666 ~ 13939475 (+)
G111197 NA other upstream 2676605 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 3068238 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 3396775 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 6151777 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 5211357 20937497 ~ 20944977 (+)
G112567 NA other downstream 5322196 21048336 ~ 21049038 (+)
G112600 NA other downstream 5416725 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 5539113 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 5891492 21617632 ~ 21622508 (+)

Expression


Co-expression Network