AMCG00006713


Basic Information

Item Value
gene id AMCG00006713
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 15767111 ~ 15798662 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006713
ATGAGTTGGCATCCCGTGCATGTATTTGTGGCCCTGAACATCATTTTCATTGGGCTGGACACATCTGGTGGCTTCGAGATGAATATCAACGCTCTGCTGCGATCAGTCAAACCGACTGCAGTAGACAACAACCAAAAGGATGAGCAGGATCTGCTGAAAACAGCGGGGCACTCATTGCATGTTTCTCAGAGTGGGACAGAGATCTTCTCCACAGGAGGCCCGAAGGTGCAGACCGAGTATGGGACAGTCAAAGGACTTACAACGGACAGAGCGCACATCTTCTACGGGATCCCTTACGCTGCTCCACCGGTGGGGCCACTCCGCTGGAAACCGCCCTCTGCCAGGAACCCTTGGAGCGGAGTCTATGATGCCACCTTCCCCAGAGCCGCCTGCTTTCAAAGTTGCACTGGCCCCATGGCTGAAGACAGGGCATGCCAACTCAAGGTCAGCGAGGACTGCCTGTACCTTAACATCTTTGTGCCTTTAGACGTGAACTTCACAGCCCCCATGTCAAAGCCCTTTCCAGTCATGGTGTGGATCCATGGAGGAGATTTCATAGTTGGCACTGCCTCCAAAGCCCTGTATGATGGGAGATGTATCACCAACTCCACCCACACTATAGTGGTCAACCTGGAATATCGCTTAGGAGCTTTCGGATTCCTTGTCACTGGTACAAATCCTAAAACATCATCTATAGGAAATTATGGCATACTGGACCAGCAAGCAGCTCTTCGTTGGGTTCAACAAAATATTGCTGTGTTTGGAGGAGATCCAAATAAGGTGACGATATTTGGGGAAAGTGCAGGAGCACAGTCTGTGAGTCtccatttaattattcaaagcAGCAAACCTTTATTTAAGCAAGCTATCCTGCAGAGTCTACCCTTATCCATTCCTCTGAAGACAAGACATGATGCATTGAAGCTGGGGAAAGATTTTGCTGAAATGGTAAATTGCTCCTTGCAGGACATGGCCTGCCTGCTGACTCTTACCTCTGAAGCAGTTCTTTCTGCTCAGATAAAAGCAGGTTCTAAAATTGTAAACCCGTTTAGATTCCTGGAGATGTTTGAGACCTGGGGACCATTAATTGATGGACAGCTAATCAAAGAGCAAGCAGTGACTGCTTTTCAGAAGGGTCACTGGCAGAAAGAGAAACCCATTCTTCTCGGTACAACCTCTGAGGAAGGGGTGATATTTGTTTATGGAGTCTTCACAAAGCCTGTCTCGTTGCTCGAGTGCACTGTTTACACCACGGCCATTTTCAAACAACATTCACTGAAAATTCTGCGCAAATACTTGCCTTCCTATCCCGAGTATGACCACCGGAAACTGCTGTCACAGATTTTAACTGACTATGTGTTCCTGTGTCCTTTGCGCAAATCTGCCCGCACAGCCGCGAAGGAGGACAGCTCGGTTTGGGTGTACGAGTTCGATCACGTAACCTCAGACCGCCGGGTGTGGGATGGCCTTACATTCTGCTATGACCACGTGTGCCACGGTGCCGAGCTCCCTTTTGTGTTTGACTCAGTCGGCCTCAAGAATCTCACCTTCACGCCACAGGAGCAAGTGCTAGCCAATCAGATGGTCTGTTACTGGGGCACATTCGCTCACAGTGGAGACCCGAATGCCCATGTGGAACAGACACCGTTTTGTAAGAAGCAGTCCTTGCCTTCATGGCCAAAGTACACTGACAGAAATCGGTGGTTAATTATGAACTTAACTCTGCAGGCACATTCTCAGAGTGGTTCGAGAGGTGACTTCTGTGATTTCTGGGATAAGCTTGACCGTGCCTGTACCTATGCCAGGAAGCAGAATATGAGGCGCATCAATATGCCAAGCACACCGTCATCTCTGACCCCGCAACAACTTCACTGCTGA

Function

GO: NA

KEGG:

id description
K03929 pnbA; para-nitrobenzyl esterase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006713 True 1878 mRNA 0.49 10 15767111 15798662

Neighbor

gene id symbol gene type direction distance location
AMCG00006710 NA coding upstream 40971 15720053 ~ 15726140 (+)
AMCG00006708 NA coding upstream 48773 15713827 ~ 15718338 (+)
AMCG00006709 krr1,LOC107395694 coding upstream 84042 15674427 ~ 15683069 (+)
AMCG00006705 NA coding upstream 699489 15066888 ~ 15067622 (+)
AMCG00006703 tph2,LOC108263971,LOC108423504,LOC106561539 coding upstream 730086 15006312 ~ 15037025 (+)
AMCG00006721 zdhhc17,LOC102798393,LOC107708015 coding downstream 200734 15999396 ~ 16030884 (+)
AMCG00006724 NA coding downstream 536448 16335110 ~ 16345016 (+)
AMCG00006725 NA coding downstream 555788 16354450 ~ 16356424 (+)
AMCG00006726 NA coding downstream 579118 16377780 ~ 16425206 (+)
AMCG00006727 syt1 coding downstream 859633 16658295 ~ 16677242 (+)
G111764 NA non-coding upstream 24459 15742438 ~ 15742652 (+)
G111727 NA non-coding upstream 229270 15537429 ~ 15537841 (+)
G111726 NA non-coding upstream 290397 15476154 ~ 15476714 (+)
G111699 NA non-coding upstream 567108 15195294 ~ 15200003 (+)
G111666 NA non-coding upstream 824187 14940208 ~ 14942924 (+)
G111788 LOC106576514 non-coding downstream 51259 15849921 ~ 15869801 (+)
G111898 NA non-coding downstream 916156 16714818 ~ 16722048 (+)
G111909 NA non-coding downstream 980740 16779402 ~ 16810470 (+)
G111941 NA non-coding downstream 1064494 16863156 ~ 16863355 (+)
G112106 NA non-coding downstream 2416131 18214793 ~ 18215048 (+)
AMCG00006672 NA other upstream 1827636 13933666 ~ 13939475 (+)
G111197 NA other upstream 2723663 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 3115296 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 3443833 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 6198835 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 5138835 20937497 ~ 20944977 (+)
G112567 NA other downstream 5249674 21048336 ~ 21049038 (+)
G112600 NA other downstream 5344203 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 5466591 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 5818970 21617632 ~ 21622508 (+)

Expression


Co-expression Network