AMCG00006714


Basic Information

Item Value
gene id AMCG00006714
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 15846231 ~ 15848777 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006714
GGGGGGGGGCGGACCACAGGAGCGGCTCCAGGAAAATCCCCGTCACGCTGGATGAGAGGATCAGTCATATTCCTGCAACCGCCGCAGACGGGAGGAGCGGAGCGCGGCAGGGAGGTCGCTATACAGAGCAAGCCGCTGATGATCACATCCCCCGCTCGCCAGGACGGCTTTGCATCGACTTGAGGTCCGGGAAATAAGGCAACACCCGCCACTTTCGTGATGTTGGAGAGCAGCGGCAAGGTGCTGAAAGAGGGGCTGCTGGAGAAGAGAAGTGATGGTTTACTGCAGCTGTGGAAGAAGAAACACTGCGTCCTCACAGACGAGGGGCTCCTGCTTCAGCCCCCGAAACAGCACGACCACCCGcatcagcaccagcagcagcagcagcagcagcagcaccaccaccacccgGTGCCCCCGCCCGGCGAGCCCGGCAGAGTCAAAGCGCTGCCCTTCTCCAGCATGAAGACCGTGGATTGCGTGGAGAGGAAGGGCAAATACATGTACTTCACGGTGGTGATGACGGAGGGCAAGGAGGTGGATTTCAGGTGCCCGCAGGACGCGGGCTGGAACGCGCAGATCACGCTGCAGATGGTGCGGTACAAGAACAGACAGGCCATCCTGGCCGTGAAGTCCAGCCGGCAGAAGCAGCAGCTGCTGGTGGCGCCGCTGCCCGGACACACACTCATCAGGAAGTCGCCGCACTTAGCGTAACGCATGGGAAGGATCAATGGGATCAATGGGATCAATGCAGCCTGGTTTTACTGGTCGTCTGTTGGTGTGCTAACTAAAGACATGTCCAATCTCAGTGAATATTGCTGATCCTAAGGAAAACATCCATTTCCACCacgtttgtattttttgtagacTTGGCTATCAACGAAACCATGAAATGCTTTTCAGCATGGAAGGAAAAGTGACTCTATTCAATTCTACCGTTTTATATTGTCTTTcgtttgtatttattagttgtattttatttctctctgcttGACATTTATGAATGTGAGATCGCAACCTATGGAGCAAAGGATGATGTTTGAACTCGTCATTAATTCCACACCCATTTTCACTTTCGAAACACACGTACACAGAAGGTTGgttatttttctgtatgtacCAATGTGCTCATAAAACactttgaagatatcttgatcATCTGCACATCGGTCTTTACAAACCGGCAACGTTAGAAAGACGTAAGCCTATGAAATATTGCGAGTTGTAAAAGTGAAATGGAGGATTTCAAGTCTGCCTTGAAGTTATGTTATTGGACTTAAAAATGATTGGCTTATCATTGcacgttttgtgtgttatcaagGATTTTGATTTGAACAATTCAACAGCACTGCTAATATTTCAAGATCCATAAGGCACACCTACCTGTCCTGGCTGAAATTAAAATTTCTTCAACTAAATCACTTTCAACTAGTTGAATGGGGCGAATATTACCAAAGACCTAAATGCTctacatatgtttattttttacagttatgCATAGTTTAACCTTAAACTGAATATAACAATTCGAGTACTTCTGAAGTTACTGTAACTTACCCTGACAAACTGTTGGAAAACTATGCCAAAAACATTTCTAATGGATTTTAGTTGGCCGACTAGGTAGTTTTTAAtgagcagtttattttttgttgtacattttcttagcagtttgttttatttgcctaATGTGTTGCATTAGCCAGTCATATTGTAGATGTGCAAATCAAGGTCTCTGAGCATTAGCTGCTGTCACTCCAATGTGTAGGATGCCCATGCAATAGAGTGCTGTAATTTCATGTGTGGAGAATTGTCTGTGGAACCTGTTGtgacatatgtatattttattttcttgttaccCAAATGTTAATCAGCAGTATTCTGAGTTGTTTCTGAAGATGTGAGAAGTATTTTGTCATATTTctcaaaaaaatacattccataACAAAAGAACCGTGTTtagtctttttgttgttgtgcagaCTGACCCTTTGCACTGAGGGTGACAGTGtctaaactgaaaacaaaccaaaaccattAACTCTGATATTTTTACACAAGCTTCTAAGTGGTACA

Function

GO: NA

KEGG:

id description
K23793 PHLDA; pleckstrin homology-like domain family A

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006714 True 2073 mRNA 0.45 2 15846231 15848777

Neighbor

gene id symbol gene type direction distance location
AMCG00006715 NA coding downstream 80955 15756282 ~ 15765276 (-)
AMCG00006717 NA coding downstream 106783 15735298 ~ 15739448 (-)
AMCG00006718 NA coding downstream 110941 15734665 ~ 15735290 (-)
AMCG00006712 NA coding downstream 141624 15702374 ~ 15704607 (-)
AMCG00006711 NA coding downstream 155184 15686692 ~ 15691047 (-)
AMCG00006716 nap1l1,LOC106609764 coding upstream 1144 15849921 ~ 15869937 (-)
AMCG00006720 osbpl8 coding upstream 50766 15899543 ~ 15928141 (-)
AMCG00006722 csrp2,LOC107383140,LOC107087065 coding upstream 183642 16032419 ~ 16039388 (-)
AMCG00006723 NA coding upstream 202589 16051366 ~ 16061810 (-)
AMCG00006734 NA coding upstream 867498 16716275 ~ 16783557 (-)
G111765 NA non-coding downstream 103516 15742446 ~ 15742715 (-)
G111759 NA non-coding downstream 116698 15728613 ~ 15729533 (-)
G111736 NA non-coding downstream 186819 15657998 ~ 15659412 (-)
G111730 NA non-coding downstream 288030 15557943 ~ 15558201 (-)
G111728 NA non-coding downstream 308395 15537476 ~ 15537836 (-)
G111940 NA non-coding upstream 1013900 16862677 ~ 16862967 (-)
G111945 rs16,rps16,LOC103382554 non-coding upstream 1049642 16898419 ~ 16901537 (-)
G112020 NA non-coding upstream 1260200 17108977 ~ 17327586 (-)
G112024 LOC103376870 non-coding upstream 1279540 17128317 ~ 17135516 (-)
G112140 NA non-coding upstream 2550486 18399263 ~ 18408777 (-)
G111767 LOC107575789 other downstream 92996 15752821 ~ 15753235 (-)
G111621 NA other downstream 1092261 14712017 ~ 14753970 (-)
G111489 NA other downstream 1481809 14360228 ~ 14364422 (-)
AMCG00006663 hmga2 other downstream 2343003 13455432 ~ 13503228 (-)
AMCG00006641 mrps33,LOC106591474 other downstream 2967575 12876292 ~ 12878656 (-)
AMCG00006719 NA other upstream 32353 15881130 ~ 15896869 (-)
G112059 NA other upstream 1784114 17632891 ~ 17633445 (-)
AMCG00006754 NA other upstream 2490493 18339270 ~ 18366562 (-)
AMCG00006773 tmem243b,tmem243 other upstream 3774378 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 3784316 19633093 ~ 19635925 (-)

Expression


Co-expression Network