AMCG00006715


Basic Information

Item Value
gene id AMCG00006715
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 15756282 ~ 15765276 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006715
ATTAAATTGAgcataaaatcataataatctaGATTGCCTCctttaaacaaatctaaaccTAACATTTAGGGAAATATTGAAGAACATACGTACTTTTCAAAATACGTTTGTGAATCCCAGGaagatttttgtttgtcttcagaTCATTATAAACGGTGTTCACATTGGAAAGAAACATgtTTGTCTCCGCATTTGTAACGTTGCTAGTGATTTGCGGTCGATTTAGCCACACCACCTCTTTGGaaaactGTGGCACCTACTCATTCTGCTGGATGTTCAATTCTAATACCACATATGACGGCATTGATATCAATCTATGGCTAAATGGAGTTGAACTGATTTCAATTGGAATTAAAGGCAAAGTCATGTCTTTGAAACTCGTATCATCTAGTTTTcattcattaacatttcaaaatggaagggatgtatttaaatggagaaTTTCCACAAGTTCATGTTCATCCCCTGTTGTTGTGAGAAGTGATCATGAAGTCAAAGATCACCCCATTAACAGCACGCTGGAAGCTTTGAAATCTTTAAATTCTGGTCTAGTTTTTGCATGTGAAAACAGAACTCTTTACCTGCGCCAAGAGGCAGATCTCATCTTTGCAGTTGGTTACACTGAGCGCTTCCCCCTCACTGTCGAATCCAGGAGCATCTCCTCACTGCTCATCTCCTGGAACGGCCCTTATTCTCTGCCCGGAGATCAAGAGCACAAGGTCACTTTGTACGAGCCCGATGATGATTCTGTTAATCTGGTGACTGTGGATTCTGTTCTAACCTCATACTACAGATTTAATAACCTGGACTCCTGTAAGGATTATGTGGCCTGTGTGGAGATGGCGGATAATCCCtccattgtgtgtgtaaaagccCTCACAGATCCCGATGTACCCAGGGACTTCAGAGTCACCGCGTTAAACGGCAGCAGCATTGCAGTGTCCTGGGACTGCCCCCTGAATCAGGAGTACACCTTGTTCACGGTCTCGGTGCTTCACCTCAACTCCACTGGTCAGCTAATCTTGGAGGAGTCTTACAGGCACGAGCAGGATGAGTTGAAGTTCACAGTCCGCAACCTGCCTGTGTGCAGTAAAGTGCAACTCGCCCTGCAGACGGTGTGCGAGAGTGACGAAACACGGAGCAGTGAAAAGATCTTTATCGATGGCAATGCAGCAAATGTCGAGTTGAAAGATGTCCGTCAAGCAGCGGCCACAAATGTCAGCTACACCCTGACGTGGTTTGTGAGGAATGACTCCTCTATTTCTATGTTCAGAGTGTACAACGATGACGTTTTGCAGAATATCACCACCGATACCAATTACACAGTGACTGGACTGCAGCCGTGCCACCAGTATAACGCCAAAGTGGAGGCTGTGTGTGGAGAGGATGTTGTGATGAGTGTAATGTCCATCCAGGCCACAACGGGCCCTGGTACTGTATCGCAATTGCAAATCCAAATTCAGGACTCCAAGGTGTACTGGACCACCAAGTCTGGATCCACTGCAACCTTTGTCTACGAGCTGTATGATGAAAACTGGACAGTGGTTGAGGGTGGGAAGCTTAGCAGTCCTGTGCTGGAGATTTCCGATCTGAAACCCAGAACTCACTATCAGCTGGAGTTGACTGAGGAGTGTTTTGGTGAGCATGGCAGTTCTGTGTTTTTGGAGTTTGTTACAGAGGCCAGGCTCTCCCCAGCATATGACTTCCCTAACAAGACCCAAATGGACCCCCCTGGCAGCCTTGAGGGCAGCACTGTCCAGTCTTTGGCCCAGAATGTCACAGTCACACAAGCTCCCATGAGGACCATGATCAGGCCCTCTGAAGatacaaatatacaatttgcTCTTTCATACCTTTTTCTTATTGTGCCATGGGCATTGCCACCCTATCTCAAGAATTTGACCTCAAAAGCTCGAATTGAACTGAATCTTCttgtaaaaaacaaattGGAGGATATCTTCAAAGAATATCCAGGTCGAGTAAAAGCTGTACTGGTAGCATTTGAATCGGCTAAATACAAAACGAAGATAACTTTTAAAATCTATGACGTTTCCAAAAAAGAAATCGAAGTGCTGTTGTCTCCAGCACAACTAACCAATTATATTCAGTCCCACACCTACCCTAACCTCACATTTTCAAATGGTGGGATATCCTTGGATGACCAAGATGAATGTTCTTCCGTGGTCTTGAATGACTGCAGTAAAAATTCCTATTGCATTAATACTCTGGACTCCTACACCTGCGTGTGTCATGAAGGATACTACGATGTGAGCGATGCCATCAGCCCTCGGCGCTCTACGTGTGATGAGGATGGCATGTTTACTCAGTGCACGGTGGGCCAGATAAAAACTGGAATTTCCAAGCAGTTTTTAAGAAGCCGCTTTGGTGGGGAGGTGAACGTCGTTTTGAATGATGGAAGCTGTCGTGTTAAAGAAAGCGAGAAGTATTATTACTCCTCCATACTTAGTAATCATGTGAACGAAACCCACATTGTGTTTAAGAATGTTCTCCACGTCTCTGCTAGCACTGATAAAGTGATCACTCGGAGGGACCTTCAAGTGGTGTGGAAATGCATCTATTCCAGAGAGTACCTCAGCCAGGCAGACCTGGGGGAAGATCCCATGGAGCATCAGTCCCTGATACTGATCCAGCACAACAGCAGCCGGATTCTCGAATTGAGCATGACCCTTCACAACAACGACTCTTTCAAGTCCAGCTACTCAATCCCAATGCAGTTGAACATTGATGATCATCTCTTCTTTGAAGTCTCACTTCATGTTCTGGGCACCTTGGCATTTGACTTTGTGTTGGAAGTGGTCTCCTGTTGGGCAACAGAGACCTCCAACCCTGAGGGAAAGCCCAAAGCATTCTTCTTGAATGACAGCTGTGCTGTTGATGACACTTTTAGGTGGTACACTGCCAATGGATTGGAGCAGATAAGTAGATTTTCTGTGCAGATATTCTCCATCAACCCGCAGAAACCTATCCATGTACACTGCATGACAAAGATATGCACacagaaggaaaaggaaaactgttCAACGatgtgtTCAGCAAAGAGAactgaaaaaagaagaagagatcTAAATAGACAACTCACAGCAGTTCTTTCTGCTGGGCCCATCATTGCAAGTAATCATACCATGACATTTGAGGCAAAGCAATCCCACTGGGTTGAGCTCCAAAATTTGATGACCATTGCTGGTGGGACAACTGCCTTCCTGGTTTTAATCTTGCTtggaattattataataaagagCATTTTGAAACACACTTCAAAAAAGCAAGAAGAGATTcgatgagattttttttttccccctattaGTTTTTATAGATCTTAttaatgtgaatattttttcagaaagtcGAATGAATTCAACAATTTTGTGAAGGATAATGTATGATTTCAAGGAATGTGACATTAATTAACGTGCATTGTTAAAGTTGGTGTAATATCCTCCATTTGAAGATAACCTGCTACTTCTCTTCAATGTTGAGGATTTATACTGATGCATATGTTGGaagattttattgaaaatgttacaaataaagccacaaaattaatgtttacaGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006715 True 3576 mRNA 0.43 19 15756282 15765276

Neighbor

gene id symbol gene type direction distance location
AMCG00006717 NA coding downstream 16834 15735298 ~ 15739448 (-)
AMCG00006718 NA coding downstream 20992 15734665 ~ 15735290 (-)
AMCG00006712 NA coding downstream 51675 15702374 ~ 15704607 (-)
AMCG00006711 NA coding downstream 65235 15686692 ~ 15691047 (-)
AMCG00006707 NA coding downstream 125111 15627216 ~ 15631171 (-)
AMCG00006714 NA coding upstream 80955 15846231 ~ 15848777 (-)
AMCG00006716 nap1l1,LOC106609764 coding upstream 84645 15849921 ~ 15869937 (-)
AMCG00006720 osbpl8 coding upstream 134267 15899543 ~ 15928141 (-)
AMCG00006722 csrp2,LOC107383140,LOC107087065 coding upstream 267143 16032419 ~ 16039388 (-)
AMCG00006723 NA coding upstream 286090 16051366 ~ 16061810 (-)
G111765 NA non-coding downstream 13567 15742446 ~ 15742715 (-)
G111759 NA non-coding downstream 26749 15728613 ~ 15729533 (-)
G111736 NA non-coding downstream 96870 15657998 ~ 15659412 (-)
G111730 NA non-coding downstream 198081 15557943 ~ 15558201 (-)
G111728 NA non-coding downstream 218446 15537476 ~ 15537836 (-)
G111940 NA non-coding upstream 1097401 16862677 ~ 16862967 (-)
G111945 rs16,rps16,LOC103382554 non-coding upstream 1133143 16898419 ~ 16901537 (-)
G112020 NA non-coding upstream 1343701 17108977 ~ 17327586 (-)
G112024 LOC103376870 non-coding upstream 1363041 17128317 ~ 17135516 (-)
G112140 NA non-coding upstream 2633987 18399263 ~ 18408777 (-)
G111767 LOC107575789 other downstream 3047 15752821 ~ 15753235 (-)
G111621 NA other downstream 1002312 14712017 ~ 14753970 (-)
G111489 NA other downstream 1391860 14360228 ~ 14364422 (-)
AMCG00006663 hmga2 other downstream 2253054 13455432 ~ 13503228 (-)
AMCG00006641 mrps33,LOC106591474 other downstream 2877626 12876292 ~ 12878656 (-)
AMCG00006719 NA other upstream 115854 15881130 ~ 15896869 (-)
G112059 NA other upstream 1867615 17632891 ~ 17633445 (-)
AMCG00006754 NA other upstream 2573994 18339270 ~ 18366562 (-)
AMCG00006773 tmem243b,tmem243 other upstream 3857879 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 3867817 19633093 ~ 19635925 (-)

Expression


Co-expression Network