AMCG00006720 (osbpl8)


Basic Information

Item Value
gene id AMCG00006720
gene name osbpl8
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 15899543 ~ 15928141 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006720
ATGAAAGAAGAGGGCGTCCTGCGCCGCCGGTTCTCCACGTGCGCCGGGGTGACGGTCGTCTTCCCACCCCGCACCGACGGGCGCAAGCTCATTCGCAACGCCTCTTTCGGAGGATACAATGAGCTCTCACCTATCCTGCCAGGTTTTGACAGAGGGAAAGATGATGTCTTACAGCTCAAAGAGGACTCCACTCATGCAATGTCTAAAAGCAAGGTCCAGAAGAAGAACTACAGGGAAGAAAAGAAGCGCGCCACAAAGGAGTTACTCAGCACAATCACGGACCCTTCAGTTATTGTCATGGCTGACTGGTTGAAGatTCGGGGGACACTGAAGAGCTGGACCAAGTTGTGGTGTGTGCTGAAGCCAGGGGTTTTGCTGATTTACAAGACCCCCAAGAATGGCCAGTGGGTGGGCACGGTGCTGCTGAATGCCTGTGAGCTCATCGAGCGGCCCTCCAAGAAGGATGGCTTCTGCTTCAAGCTGTTCCACCCCCTGGAGCAGTCCATCTGGGCTGTAAAGGGTCCCAAAGGGGAAGCGGTGGGATCCATCACTCAGCCTTTACCCAGCAGCCACCTCATCTTCCGGGCAGCTTCCGAATCAGATGGCCGCTGCTGGATGGATGCTCTGGAGCTGGCCTTGAAGTGCTCCAGCCTGCTGAAGCGAACCATGATCCGGGAGGGGAAGGAGCACGAGCTGGGCTCCACAGGGGAGCACTCTCAAGTCAACTTCTACAGCCTGCTTCGAGCGAACAACCTGCCCGGCACCGAAAGCTTCCAGTTTAACGACAGTGAAATCGAGAGGCAGCATTTCAAGGACAACGACCTCTACTCCGACAAGTCTGACCGGGAGAACGAGCAGGACCACGAGGAGTCGGACAACGATGTGCTGGAGAAGAGCGAGGAGAGCGACACGGACACCTCTGAGAGGCAGGACGACTCCTATGTGGATCTGGAACCCAACGAGATGCTGCAGGAGACAACGTACATTGAGCAGTCTCATGAGGAGCTGGGGGAGGCAAGTGCAGGGGAGGCCTCGCAAACAGAGACTGTGTCAGAGGAGAACAAGAGCCTGATCTGGACCTTACTGAAGCAGGTCCGGCCAGGCATGGACCTGTCCAAGGTAGTCCTGCCCACATTCATCCTGGAACCACGCTCCTTCCTGGACAAGCTCTCCGATTACTACTACCATGCGGACTTCCTCTCAGAGGCTGCCGTGGAGGAAAATGCCTACAACCGAATGAAAAAAGTTGTAAAATGGTATTTGTCTGGGTTTTACAAAAAGCCAAAgGGACTGAAAAAACCTTACAACCCAATTCTGGGTGAAACCTACAGATGTCAGTGGCTTCATTCGAAGACCAATAGTAAGACGTTCTACATTGCCGAACAGGTGTCCCATCATCCTCCGGTGTCTGCCTTCTATGTAAGTAACAGAAAGGATGGGTTTTGCCTCAGCGGAAGCATCCTGGCCAAATCAAAGTTTTATGGTAACTCTTTATCTGCCATTCTGGATGGAGAAGCCAGACTGACCTTCTTGAACAGAGGGGAGGATTATGTTATGAATATGCCATATGCTCATTGTAAAGGAATTCTGTACGGTACAATGACCTTGGAGCTCGGAGGTCAAGTAAACATCACCTGTGAGAAAACAGGATACAGCTCTTTGCTTGAATTCAAACTGAAGCCGTTTTTAGGCAGCAATGACAGTGTTAACCAAATCTCTGGAAAAATCAAACTTGGGAAGGAAGTGCTGGCTACGCTGGAGGGACACTGGGATAGCGAAATCTTCATCAACGACAAAAAGACAGGCATCTCTGACACCTTCTGGGACCCCACCCCCGAGCTGAGGCAGAGCAGGCTGATGAGATGCACTGTGGCGCCGGAGGAACAGGGGGACTGGGAGTCAGAGAAGCTTTGGCAGCATGTGACCCGCGCTATAAACAACAAAGACCAGACTGAGGCCACGAACGAGAAGTACATCCTGGAGGAAGTACAGAGGAAGGCCGCCCGGGAGCGCAAGGCAAAGTGTGAGGAGTGGAGCCCCACCCTGTTTGAGCAGGACCCCATTACAGGAGAGTGGCATTACAAATATGCAGATACCCGCCCATGGGATCCTCTGAATGATATGGTTCAGTTTGAGAAAGATGGCTGGGTCCAGACAAAAGTCAGGCACAGGACACCAATGGTCACCGTTCCTAAACGAAAACGCAAGCAAAGTGATAAGCCCAAAAGTGCGGAGAGTGGCTGTTCATCTCCGGAACCAGATCGACACGATTCGTCGGGTAGTGAAAGACACAAAACCAAGCACAGTGCCCGGCTAAGGAAAAAAGGAACAGACCTCAATGAACTTCAAAGTGCCATTGATTCTATTAAACGCACACAAGAGGACATTAATAGGAGCATCACGGCGCTGCGCAGCCGAGCCCTGGCGCCTCATTCGGAGAGTGGCTTCCTGCAGCAGAGGGATTATGTCATCATCTTTCTTCTCATCCTCATCCAGATCTTCATCAATTTCATCTTCAAGTAGCCCTCGGGGCTGCGGCTCCCAAGCAAAGGGCTACAGGGAGGAAGAACATTCCTGAAAGTGCAGACCTGAAGCTTCCTCGTCCCTTGTCATTTGAAGCCAATCACAAACTGTcccataagaaaataaatacaaacactacacacacacacagacgagACCCAGATAACGAGACTTTGTGAGGAAGTGGACTCCAGCCTCGTTCTGCCAGCATCtgaataaatcatatttattctcATTGTAATAACTGGCTGTTCCATATATTTCAATGCCAAGAAGGTACACAATTGTATACACTGAATTATTTTGGAAGTTGTGAAATTGTTCCAAAAATAACCCTTTTGACTGAAAACGGTAGTGAATGAATTTATTGAAAAAGGACAgtttcttgcatttttatttaaggtAGCTGGTGTCCGAGAACATGCTTTTCTTTGGCATGAACTGGAGATGCCTCTCACCAAGGTTTGGATAGGACCGGGCTGCAATACCCAGGAAAGATGCAAGGCCTTCTTTAACAGTGTTGTGAGCATTAGGCCACAGGAAACGTTTTACAGTGACGCGGTTTTGACCTTTCCTGtatgttttatgctttttttaacGGGGTGGGGtcggg

Function

symbol description
osbpl8 Orthologous to human OSBPL8 (oxysterol binding protein like 8).

NR:

description
PREDICTED: oxysterol-binding protein-related protein 8 isoform X2

GO: NA

KEGG:

id description
K22285 OSBPL8, ORP8; oxysterol-binding protein-related protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006720 True 3136 mRNA 0.50 20 15899543 15928141

Neighbor

gene id symbol gene type direction distance location
AMCG00006716 nap1l1,LOC106609764 coding downstream 29606 15849921 ~ 15869937 (-)
AMCG00006714 NA coding downstream 50766 15846231 ~ 15848777 (-)
AMCG00006715 NA coding downstream 134267 15756282 ~ 15765276 (-)
AMCG00006717 NA coding downstream 160095 15735298 ~ 15739448 (-)
AMCG00006718 NA coding downstream 164253 15734665 ~ 15735290 (-)
AMCG00006722 csrp2,LOC107383140,LOC107087065 coding upstream 104278 16032419 ~ 16039388 (-)
AMCG00006723 NA coding upstream 123225 16051366 ~ 16061810 (-)
AMCG00006734 NA coding upstream 788134 16716275 ~ 16783557 (-)
AMCG00006735 ppp1r12a,LOC107591124 coding upstream 872705 16800846 ~ 16835040 (-)
AMCG00006736 ppp1r12a coding upstream 932966 16861107 ~ 16861777 (-)
G111765 NA non-coding downstream 156828 15742446 ~ 15742715 (-)
G111759 NA non-coding downstream 170010 15728613 ~ 15729533 (-)
G111736 NA non-coding downstream 240131 15657998 ~ 15659412 (-)
G111730 NA non-coding downstream 341342 15557943 ~ 15558201 (-)
G111728 NA non-coding downstream 361707 15537476 ~ 15537836 (-)
G111940 NA non-coding upstream 934536 16862677 ~ 16862967 (-)
G111945 rs16,rps16,LOC103382554 non-coding upstream 970278 16898419 ~ 16901537 (-)
G112020 NA non-coding upstream 1180836 17108977 ~ 17327586 (-)
G112024 LOC103376870 non-coding upstream 1200176 17128317 ~ 17135516 (-)
G112140 NA non-coding upstream 2471122 18399263 ~ 18408777 (-)
AMCG00006719 NA other downstream 2674 15881130 ~ 15896869 (-)
G111767 LOC107575789 other downstream 146308 15752821 ~ 15753235 (-)
G111621 NA other downstream 1145573 14712017 ~ 14753970 (-)
G111489 NA other downstream 1535121 14360228 ~ 14364422 (-)
AMCG00006663 hmga2 other downstream 2396315 13455432 ~ 13503228 (-)
G112059 NA other upstream 1704750 17632891 ~ 17633445 (-)
AMCG00006754 NA other upstream 2411129 18339270 ~ 18366562 (-)
AMCG00006773 tmem243b,tmem243 other upstream 3695014 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 3704952 19633093 ~ 19635925 (-)
G112420 NA other upstream 4307715 20235856 ~ 20236206 (-)

Expression


Co-expression Network