AMCG00006723


Basic Information

Item Value
gene id AMCG00006723
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 16051366 ~ 16061810 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006723
ATGACCCCACTGAAGAACGAGGCATCGCCAGCCATGCACCACAGAAGAGGATGCACCCCAGAACAGATTCACATCACCCCCAGCAAGCACCTGGACCGAAACCAGGCCGAGCCCTGGACCCCAACAGCAAACTTGAAAATGCTCATCAGCGCTGCTAGCCCTGACATCAGGGACCGCGAGATGAAGAAGAGCCTTTTTCGCccaattgaaaatgaaaaggacGAGGTTCTGGATGACCCAAGCCAGTTCGATGTCATGGATGACTGTAACCCAGATGAGTTTGAGAAGCAGCGGCCTAGCAGGAAGTTGAAAAGCCTGGGCCTTCTCTGCCAGAAGTTTCTTGCCCTTTATCCTGACTACCCACTGTCTGCAGAGAAGACCAACATTTCTTTAGATGAGGTGGCCATGAGTCTCGgAGTGGAGCGCAGGCGGATCTATGACAttgtcaatgtcctggagtctCTAATGCTGGTGAGCAGGGTGGCTAAGAACCAGTACTGCTGGCATGGGCGGCACCAGCTGTGCCAGACCCTCGAGGACCTGCAGAGCACGGGCAGGCGGCAGCGCTACGAGGAGCAGATGGCACAGATCCGTGACAAAGACGTCAGGCCGGCCGAGCCGCAGAGGAGGGACTACCTCCCCGAGCCCCCGGAGGACGGCGGCGACTCCGACATCGGGTCTGGGTCAGCCAACAGAAGGAAAGACAAGTCATTGCGGATCATGAGCCAGAAATTCGTTATGCTGTTCCTCGTGTCGAAGACCAGGATTGTTACCCTTGATGTTGCTGCTAAGATCCTTATCGAAGAGAGTCAAGACGCTACCAACCACAGCAAGTATAAAACTAAGGTCCGCCGGTTGTATGACATCGCCAACGTCTTGACCAGCCTGGGCCTAATCAAGAAGGTCCATGTCAAAGAAGAGAGAGGCCGGAAACCTGCTTTTAAATGGATCGGCCCTGCTGAGTTTCAGAGCTCCGGTGGTAAGAGAAGCTACCCCAATAGCCCCATTTTTCAATTCCCAGAAGATGTGGAGGCAGTGGCCACAATAGATAGCTTACCAGCACCCCACCCTCAGCTCCCGGGAAAACCGAGACTGGCGCGCCACTCCTCCTTCCACATGCTGTCAACTTCTGTCGCAACGCAGCGGGCCATCAGCTCCGCCCCCAGCAGCCCACACAGAGACCGCAAGGCTTTGACTCCTGAGCCTGTGGATTATTCCCGAAAGACAGCGGTGGTGTGTAAACTGCAGTTTGGAGAGAATTTAAGATCCCAGCACTGTGGAGGCCCGAAGAGCAGCTCTGttcctccctctcccacccTCGCCCCGGTACACGTTCCCAGCTCTCCAGACTCTCATTACGAATCTTTCCCAAAGTCCCCTTCCCAGCCTGCCTTTTCCTTGCCACGGCCGGAGCTCCTGTTACCCCGGTTTTATCCGAGCACTGCCAAAACCTGCGCACCCATCCTGGCGATGTCCTCGAAGAAAGCGTATGAGGAGGGAGATCCCCAACCCCATTCTCCCTTGGTTTACTTCCAAAACCTGTCCCCCGCGTCCATGGTCATGCTGTGTGGGAATGGCGGTGTCTGCGAGGGTGTGGAAAGGGTTGAGACGGGCACGGAAGGTCATAGGTCACTGGGCGCAGACCAGATATCTCAAGCGCCCCAGCAGCGCAGCGTGGCAAAGAGACGGCTCGCTGGCGACGCAGAAGAACCGACGGGCAAAAGGGACAGGTTGACGCATAGTGAGGCGGAGAACTCTCAAGAGAAGAGGTTGAGAGGAAATAAGGAGCCAGACTGTACCTCAAACACTGTGAAGACCCCAGGCTGCCGCTCGGACCCCAGGCCGCCGTCacaagagggagggaggtgcaCCGTCCCCTCGGAGGAGATGAAGCCTCGCAGCCCTTTCGAAGAGGTGGAGACTGGAAGGCCGGGTCCTCAAGATCTAGCCCCGCCTTCGCACTACCTGTATGTGCCCACCTCTGCAGGTCTGAATGGTCTGAATGGGTTGAACTTCCTGCTCCCCGCGGGACACGGTGCCGGCGGCCTGACTCTCTCTCCCAACGGCTTGCCCGCTCTGGCCTTGCCATACGTGGTGGTGCCCTCCTCTGCCCTCTCCCCCTACCCACTCCTTGCCAGCGGCCTCCCGGGTGCCAACGCTGATCTGCACGGCAAAGGCACGATCAGTTTCAACATGCCGGCGATGGTGTCTCCGGCGCGCTTCGTGATCGGAGCCCGGCCTGCTCCCGCCCCCGCGACCCCCGAATTCTCCCCCAGCCACCAGGACGGCCGGCTCCCTGCTTTGGGATACTCCAGTCCGGAGGAACCCCGGCCCCTGAGCGCGGGGAACCCCGACACACCAGCTACACTCGGACCCCTGTCGGCCTTCCTCCGATTACAGCCACAGCCACAAACACCACTGACTCCAAAAGAGGCTCGCATGGCCTACCCCGAGGCCTTCTTCCAGACCCCAGGGACGCTGGGTTCTGCCGTGTCCTCCATTGCCCGGAAACGGGGCCACACCAGAGGAGCGAGCTCGGCCCAGAGGAGGCTGGATATTGGCAACAACACCGCGAACTAA

Function

GO: NA

KEGG:

id description
K09391 E2F7_8; transcription factor E2F7/8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006723 True 2580 mRNA 0.59 11 16051366 16061810

Neighbor

gene id symbol gene type direction distance location
AMCG00006722 csrp2,LOC107383140,LOC107087065 coding downstream 11978 16032419 ~ 16039388 (-)
AMCG00006720 osbpl8 coding downstream 123225 15899543 ~ 15928141 (-)
AMCG00006716 nap1l1,LOC106609764 coding downstream 181429 15849921 ~ 15869937 (-)
AMCG00006714 NA coding downstream 202589 15846231 ~ 15848777 (-)
AMCG00006715 NA coding downstream 286090 15756282 ~ 15765276 (-)
AMCG00006734 NA coding upstream 654465 16716275 ~ 16783557 (-)
AMCG00006735 ppp1r12a,LOC107591124 coding upstream 739036 16800846 ~ 16835040 (-)
AMCG00006736 ppp1r12a coding upstream 799297 16861107 ~ 16861777 (-)
AMCG00006737 lin7a coding upstream 998553 17060363 ~ 17072397 (-)
AMCG00006740 NA coding upstream 1082889 17144699 ~ 17271736 (-)
G111765 NA non-coding downstream 308651 15742446 ~ 15742715 (-)
G111759 NA non-coding downstream 321833 15728613 ~ 15729533 (-)
G111736 NA non-coding downstream 391954 15657998 ~ 15659412 (-)
G111730 NA non-coding downstream 493165 15557943 ~ 15558201 (-)
G111728 NA non-coding downstream 513530 15537476 ~ 15537836 (-)
G111940 NA non-coding upstream 800867 16862677 ~ 16862967 (-)
G111945 rs16,rps16,LOC103382554 non-coding upstream 836609 16898419 ~ 16901537 (-)
G112020 NA non-coding upstream 1047167 17108977 ~ 17327586 (-)
G112024 LOC103376870 non-coding upstream 1066507 17128317 ~ 17135516 (-)
G112140 NA non-coding upstream 2337453 18399263 ~ 18408777 (-)
AMCG00006719 NA other downstream 154497 15881130 ~ 15896869 (-)
G111767 LOC107575789 other downstream 298131 15752821 ~ 15753235 (-)
G111621 NA other downstream 1297396 14712017 ~ 14753970 (-)
G111489 NA other downstream 1686944 14360228 ~ 14364422 (-)
AMCG00006663 hmga2 other downstream 2548138 13455432 ~ 13503228 (-)
G112059 NA other upstream 1571081 17632891 ~ 17633445 (-)
AMCG00006754 NA other upstream 2277460 18339270 ~ 18366562 (-)
AMCG00006773 tmem243b,tmem243 other upstream 3561345 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 3571283 19633093 ~ 19635925 (-)
G112420 NA other upstream 4174046 20235856 ~ 20236206 (-)

Expression


Co-expression Network