AMCG00006739


Basic Information

Item Value
gene id AMCG00006739
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 17101722 ~ 17120725 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006739
ATGAGTGTTTTCAAACCTAGCATTTTAAAAACGTTACTTTGGAATAACAGCGTGGgtagagctggagctggagcatgTCTGACTGATTTAGTAAAGGCGAAAAGAGCTTGTATACAGGGACGCTGGCGTGCAGAAAGCGAAACTTGCAAACTTGCATACTTGCAGAGTCGCAGGAAAGTCTCAGCACAAGCAGATGCTGGTTTTGCGTGCACTTCGCCTGGACTGCTTTATCAGCCCAGTGCAACCAGCCTGCGTGCATACAGCTCTGCGACACACGGCGATCATCCCTGCAGCCGCGACTCCTATGATGAAGTGTTCAGGCTTTCTCTGCGCGATCCAGAGCACTTTTGGGGTGAGGCAGCTCAGGGTATAACCTGGGTGCAGCCGTGCAGTAACACGTTGGATAATAGCAATCCACCATTTCCTAGATGGTTTGTTGGTGGGAAGCTGAATATTTGCTATAATGCAGTAGACCGCCATGTTGAAAATGGACGAGGGGACCAGCCGGCCATCATACATGACAGTCCAGTTACTGGGACTAAACAAACCATCACGTACAGTGAGCTGCTGACTGAGGCTATCTTCACCATGCTGGCCTGTGCACGGATAGGAGCCACACACAGCCTGATATTTGGCGGTTTTGCATCGAAGGAGCTGTCTGTGCGAATCGACCACGCCAAGccTAAACTGGTGGTGACAGCCTCCTTTGGCATTGAACCTGGGAGAAGAGTGGAGTACATTCCTCTGGTTGAGAAAGCATTGGAGCTTGGCCTACACAAGCCTAAAAAAATCCTCATCTATAACCGTCCAAATATGGAATCGGTTTCCATGACGCCTGACACGAGTCTGAATTGGGATGAAGAGATGGCTGCTGTCTGTCCTCATGACTGTGTTCCTGTCTCCTCCGATCACCCTCTCTATATTCTCTATACCTCAGGAACTACAGGAATGCCAAAGGGAGTTGTCAGAGATACAGGCGGATATGCTGTGATGTTGAACTGGACGATGTCAAATGTGTACGGCCTAAATCCTGAGGAGGTGTGGTGGGCAGCGTCTGACCTAGGCTGGGTGGTCGGTCACTCATATATCTGTTACGCTCCTTTACTGCATGGCAACACCACAGTCCTGTATGAGGGCAAGCCTGTGGGGACTCCAGATGCTGGGGCATATTTCCGCGTGATATCAGAGCACGGGGTGACAGCCATGTTCACCGCCCCTACGGCAATCAGGGCCATCCGCCAGCAGGATCCGCAGGCCTCCTTACGTAGACAGCACCAGCTAACAAGGATGCGGACGCTGTTTGTTGCCGGCGAGCGCTGTGATGTGGAGACTCTGGAGTGGGCTAAGAAGGTTTTCAAGGTGCCCGTCTTAGATCACTGGTGGCAGACC

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01908 ACSS3, prpE; propionyl-CoA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006739 True 1389 mRNA 0.52 9 17101722 17120725

Neighbor

gene id symbol gene type direction distance location
AMCG00006733 myf6 coding upstream 64587 17026322 ~ 17037135 (+)
AMCG00006732 LOC108413201 coding upstream 79012 16954888 ~ 17022710 (+)
AMCG00006731 NA coding upstream 154262 16940262 ~ 16947460 (+)
AMCG00006730 otogl,LOC107564906,LOC107736094,LOC107662850 coding upstream 161536 16903520 ~ 16940186 (+)
AMCG00006729 rps16,LOC103382554 coding upstream 200229 16898281 ~ 16901493 (+)
AMCG00006738 NA coding downstream 16432 17137157 ~ 17143440 (+)
AMCG00006742 NA coding downstream 286304 17407029 ~ 17466135 (+)
AMCG00006744 LOC106561381,LOC108414015,LOC106573180 coding downstream 416952 17537677 ~ 17564638 (+)
AMCG00006749 NA coding downstream 697090 17817815 ~ 17855390 (+)
AMCG00006748 NA coding downstream 739407 17860132 ~ 17864658 (+)
G111941 NA non-coding upstream 238367 16863156 ~ 16863355 (+)
G111909 NA non-coding upstream 291252 16779402 ~ 16810470 (+)
G111898 NA non-coding upstream 379674 16714818 ~ 16722048 (+)
G111788 LOC106576514 non-coding upstream 1231921 15849921 ~ 15869801 (+)
G111786 NA non-coding upstream 1316960 15784519 ~ 15784762 (+)
G112106 NA non-coding downstream 1094068 18214793 ~ 18215048 (+)
G112181 NA non-coding downstream 1573153 18693878 ~ 18694311 (+)
G112182 NA non-coding downstream 1574434 18695159 ~ 18745217 (+)
G112207 NA non-coding downstream 1780214 18900939 ~ 18903543 (+)
G112233 NA non-coding downstream 1974903 19095628 ~ 19100398 (+)
AMCG00006672 NA other upstream 3162247 13933666 ~ 13939475 (+)
G111197 NA other upstream 4058274 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 4449907 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 4778444 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 7533446 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 3816772 20937497 ~ 20944977 (+)
G112567 NA other downstream 3927611 21048336 ~ 21049038 (+)
G112600 NA other downstream 4022140 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 4144528 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 4496907 21617632 ~ 21622508 (+)

Expression


Co-expression Network