AMCG00006742


Basic Information

Item Value
gene id AMCG00006742
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 17407029 ~ 17466135 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006742
ATGGCCTGCTTGCTAGTAGACAGTGCCTCAATAGAAACCGTAAAGACGACATTAGATGCGATTAAAGAATTCCTCACTATCTCGCTTAGGATAGCAAATGCTCACACTGTTGACTTTTACACCGGAGATGTGTGGGCTGCATACATGGCTGTCCCCCCCGAAAACGTGCTGTCGGTGATCGGCTCTAGGCAGGAGAGGGCGCCATTGGACGCGGAAACCCAAGGAAGTATAGTACACAAAATGGCTCCTTATGGTTTCAGCAAGGACACAAAACACTTGGTGGATGTAGCAAGATTTCTTGATGCTGCAAAAGCTCATTCTCTGCCAAACCTTCCCGTGTGCACGCCACTGCGTGGACTGATGCACTCGCTACACGGCGGGACATTCAAGAGCAGAGATGTCATTGAATTTTCAGATGTGACTCTGAGAACCGACGAGTTTATGAATTCAAAGAAATCACACGAAGTGCAGATCATGTCAGAACTGGTTGCAAGTTTAACCAAGCACTGCCGGATCCAGCAGGTCATAGACATTGGATCTGGAAAAGGCTACTTGTGTTCATTCCTGTCCATGCAGTATGGCCTGAAGGTTTATGGGATAGACTCCTCCAGCACCAACACGCACGGGGCCCACGAGAGGAACCGGAAACTGAAGAAGTTTTCAAAAGCCTACCAAAGACACAGCAACGCAAGACATCCAAGACCGATTTCAAAGGGTGAAGAGAAGAAACAGGTGCAGGAAGGGGGTGACAACACCAATAAATCTGTATTGAACAACAAAGACACGGACGGACTGACATCACACTTGGAAAGGGCCACTCTTCAAGGGCCTGCTACCTCACTCAGCCCCCCTGAGGAGACTCTGAAGGCTAAAGCTGAGACAagtacagacacacaattaGATGCAACAGACGTTGAAACTGCCAACCCGTTCCTCTGCGTCCTCTCGGCAGACGCAGTAGAGTTACCTTCTCCACGGACACCTCCCAGCGAGCTGAGcacagaggagaaggagaggcgGAAGAGTGAAAACCTGAGGAAGAAGGCCCAAAGCAGACATGACAGCAGCTTGTACTCGCCTCTGACCTCTTACGTTACAGCCGAAACAGAACTGCGGGAGATCATAGCCGACATGGAGGATTCTGTAATGGTTGGCCTCCACACATGTGGCGATCTTGCGCCTAACACTCTCCGGATGTTTGTGGCCAGACCTGAGCTGAAGGCGGTGTGCAGTGTGGGCTGCTGCTATCACCTCTTATCTGAGGAGTTTGATTGTGCAGGACAAGAATGTCCTGGCGGTGTGTGGGGGTTCCCTATGAGCCAGTTCATGAGACAACAGAGCTGGTACTGTGGCAGGAATGCGAGGATGTCAGCATGTCTTgCACTTGAAAGAGTAACTGTTGGCCAAGGGCTCTCTGAAAGCCTAATTAAGGATTACTATGATACATATAGACCAAGAATGAAAGAGATGGAGGCTTTCAATAAGaaaCAGACACTTTCTATCCTCAGGATACAGGACACTTTCCAGCGCCGCGGCTCCAGCTCCAGCCCCAACCCCAGCTCCAGCCCCAGCCAGCCGGGGAGGCTCTCAGATGCGTCCCGCCGCGCCGTGAGCACACAGCCCCCGTCTCTCTGTCCCGCGTCCGATCCACGCTGA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006742 True 1656 mRNA 0.51 10 17407029 17466135

Neighbor

gene id symbol gene type direction distance location
AMCG00006738 NA coding upstream 263589 17137157 ~ 17143440 (+)
AMCG00006739 NA coding upstream 286304 17101722 ~ 17120725 (+)
AMCG00006733 myf6 coding upstream 369894 17026322 ~ 17037135 (+)
AMCG00006732 LOC108413201 coding upstream 384319 16954888 ~ 17022710 (+)
AMCG00006731 NA coding upstream 459569 16940262 ~ 16947460 (+)
AMCG00006744 LOC106561381,LOC108414015,LOC106573180 coding downstream 71542 17537677 ~ 17564638 (+)
AMCG00006749 NA coding downstream 351680 17817815 ~ 17855390 (+)
AMCG00006748 NA coding downstream 393997 17860132 ~ 17864658 (+)
AMCG00006751 NA coding downstream 472767 17938902 ~ 17942224 (+)
AMCG00006750 NA coding downstream 497266 17963401 ~ 17964771 (+)
G111941 NA non-coding upstream 543674 16863156 ~ 16863355 (+)
G111909 NA non-coding upstream 596559 16779402 ~ 16810470 (+)
G111898 NA non-coding upstream 684981 16714818 ~ 16722048 (+)
G111788 LOC106576514 non-coding upstream 1537228 15849921 ~ 15869801 (+)
G111786 NA non-coding upstream 1622267 15784519 ~ 15784762 (+)
G112106 NA non-coding downstream 748658 18214793 ~ 18215048 (+)
G112181 NA non-coding downstream 1227743 18693878 ~ 18694311 (+)
G112182 NA non-coding downstream 1229024 18695159 ~ 18745217 (+)
G112207 NA non-coding downstream 1434804 18900939 ~ 18903543 (+)
G112233 NA non-coding downstream 1629493 19095628 ~ 19100398 (+)
AMCG00006672 NA other upstream 3467554 13933666 ~ 13939475 (+)
G111197 NA other upstream 4363581 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 4755214 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 5083751 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 7838753 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 3471362 20937497 ~ 20944977 (+)
G112567 NA other downstream 3582201 21048336 ~ 21049038 (+)
G112600 NA other downstream 3676730 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 3799118 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 4151497 21617632 ~ 21622508 (+)

Expression


Co-expression Network