AMCG00006745


Basic Information

Item Value
gene id AMCG00006745
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 17945016 ~ 17954821 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006745
AAAGGAGAAACAAAGTTAAAAGTTGATCAACTTCTCTTGCCCCTGCAGTCCGGCGCTGGTGCGGCTCTGAGCTGTGCGGGATAAAGGCGCACCATGCTTGTGTGACGGCTGTGGGATTTCTCCTTGAAGCTGTCATGGCTCCCTTTggaagacatttcttaaaagcGCGCCTGAAAAATAGGTCTGCTAGTAAAGACATTGTGtctgaagaaaatgaaattcagGTGTGGGTCTGCCAAGAGGAGAAGGTGGTTTCTGGACTGACGAAACACACAACCTGCGCAGATGTGGTGCAGGCTTTGCTGGAGGATCACAAAACAACTACTGGAGCCAAGAGGGTCCTTGTGGGAAATTCAAGGGAGTTTTGCCTTCTGGAAAGATGGAAAGGGTTTGAGAGAGCGCTCCCCCCTTTAAGCAGGATCTTGAGGCTCTGGAAGGCATGGGGAGATGAGAAACCCTAcctgcaatttattttagtgAGGACTGCAGACTTTGTGCCTCATTCTGGCTGGAGAACCTCCGAAGCCAAGGCAATGCCAGCCAACCAAAAACAGTGGGATCAGGGACCAGCGCAGTATGTGAAGTCTTTGCCAGTGGACAAGCAGAAGAGGATGGTCAAAAAAGCCTTCCGAAAGCTAGAAAAGCTAAGGAAGGAAACTGCACGACAAGAAAAGGATGGATTGGAGCCCGTGGTCCAGTTAATTGTGTCTCAGGACCACATGATCAGGGAGCAGATTCAGAGAATGAGAGAGCTTGATCTGGAGATTGAGAAGCTTGAGTTGGACTTGCGTATGAATGAGGAAAAGACAGAATTGGATAGTTGGGGTGAGGCTGCTTTTTCAAGCTTCAGTGAAACAATGGACAGCCAGGCATCAGAAAGTCCATCAAAGGACTTGCTTTACATAGGCGATGGATTTGGACAACTAGAcgaacagttaaaaaaacacagggaTCTGATTGGACAGCTTTCCAATGAAATTGACAAGGAGATCGAAAGCATTTGGGTACAAGACACCGAAGAGCCAGAAGGAGCAACGGCGAGCTTTGGCTTAGAGACAGAGATAGAAGAAACTGCTGCTGAACTACAGAACATTAAGACCGATCTGGAAAACAGCATGTACAAGGGCTTATCAATACATACCCAGCTGACAGAGGTTCAGAAAGAACTGAAGCAACATGACTTGctgttacaaacaaaaaatcaggaATGTGAGCATTTAGCAGCTCAGCTTAGCTCTTTGCAAGTAACAGATAGTGTGAATCATATTTGTTCTACAAGGGAAAAGAGCCAAACCAGGATAAGTACAGTGCAAAGTAAGCTGTGTCAAAAATTGTCCAAAACAGATGTGACAGACACCGATTCAGACACCGGAATAAGCTCAACTCATAGCCAGGACTCGCTGTCTCCCTGTGGAGAACTCTCTCTTccctcattttaatttaagacaccacattttaatgactgtatttataatttatccTTTTCAAAGTTCAGGTGTACCTGTCACCAAATCTCAGTGCTTGctgaattttattttggttaaacAGTAAAATGTTTCCTTGCCCACTTGATGGGTAGCTACATTTGTGATACATCAACTGTTTTGGTTTACTTTTGGTTAACAGCTAGTGAATTATATATCAGACTTATAGTAAGATAATAGAGAGGAACAGTTTTCTGCTTTCTGAAGGGTCAAAAATAGCTTTTCCTAAGTATCAGAAAATACTGGGTTTGTATGGAATAATGACAATTCtacttgtttgtttccttgatACATTTTGTTATCTATAGTCATCCATGCTTCCCATAGAGTTAATACAAGAGTCAAGGACATTGTTATACGTAGGAGAAATAAGTATTGTTATGAGAATTgtcttatatttaaaatagtacAATAGGTATTATGTTGTATAGGAAACAGACATTCTCCAAGGCCAGTCCAAGAGGACTGTAACTCTCACACAGTCACCCTGTGGTTAAGGACATTCCACTAGCATCAGGTTTCTTAAGTGCTTTCATAAGAGATGACTAAGCTACTAAAGTTGGTCCCTGCAATACAcagatgtaataaaataaaactatattacaagttttcatgtttttacagGTAGAGACATTGTAttctgcagtttaaaaatagctttgaATTGTTGGGATGTAAATGTCAATGTAATTTATTGGACACTTAACTGCTTAAATACAGTGTATTTGAATGAAATGCCTATATACTCTCATATGTTGCTCATGTGTGCAAGACAATAAAGCATATCTTCCAAGAGTTTGATTTTCACTTTATGGATGGGGTTGTTCTGGTATATTTTGGCAATATGTTGCCTGTTAAAG

Function

GO: NA

KEGG:

id description
K09856 RASSF9_10; Ras association domain-containing protein 9/10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006745 True 2344 mRNA 0.41 2 17945016 17954821

Neighbor

gene id symbol gene type direction distance location
AMCG00006746 slc6a15,LOC102794091 coding downstream 151557 17771967 ~ 17793459 (-)
AMCG00006743 NA coding downstream 538188 17403626 ~ 17406828 (-)
AMCG00006741 ppfia2 coding downstream 617940 17326629 ~ 17327076 (-)
AMCG00006740 NA coding downstream 673280 17144699 ~ 17271736 (-)
AMCG00006737 lin7a coding downstream 872619 17060363 ~ 17072397 (-)
AMCG00006747 mgat4c,LOC107553950,LOC106573111 coding upstream 33208 17988029 ~ 17991899 (-)
AMCG00006757 NA coding upstream 263352 18218173 ~ 18218449 (-)
AMCG00006756 NA coding upstream 264095 18218916 ~ 18337052 (-)
AMCG00006755 NA coding upstream 461095 18415916 ~ 18486164 (-)
AMCG00006759 NA coding upstream 581228 18536049 ~ 18603662 (-)
G112020 NA non-coding downstream 617430 17108977 ~ 17327586 (-)
G112024 LOC103376870 non-coding downstream 809500 17128317 ~ 17135516 (-)
G111945 rs16,rps16,LOC103382554 non-coding downstream 1043479 16898419 ~ 16901537 (-)
G111940 NA non-coding downstream 1082049 16862677 ~ 16862967 (-)
G111765 NA non-coding downstream 2202301 15742446 ~ 15742715 (-)
G112140 NA non-coding upstream 444442 18399263 ~ 18408777 (-)
G112195 NA non-coding upstream 740251 18695072 ~ 18745217 (-)
G112205 NA non-coding upstream 928807 18883628 ~ 18886046 (-)
G112270 LOC100136012 non-coding upstream 1453998 19408819 ~ 19418420 (-)
G112287 NA non-coding upstream 1559978 19514799 ~ 19515004 (-)
G112059 NA other downstream 311571 17632891 ~ 17633445 (-)
AMCG00006719 NA other downstream 2048147 15881130 ~ 15896869 (-)
G111767 LOC107575789 other downstream 2191781 15752821 ~ 15753235 (-)
G111621 NA other downstream 3191046 14712017 ~ 14753970 (-)
G111489 NA other downstream 3580594 14360228 ~ 14364422 (-)
AMCG00006754 NA other upstream 384449 18339270 ~ 18366562 (-)
AMCG00006773 tmem243b,tmem243 other upstream 1668334 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 1678272 19633093 ~ 19635925 (-)
G112420 NA other upstream 2281035 20235856 ~ 20236206 (-)
AMCG00006807 NA other upstream 2692499 20647320 ~ 20653659 (-)

Expression


Co-expression Network