AMCG00006748



Basic Information


Item Value
gene id AMCG00006748
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 17860132 ~ 17864658 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00006748
GGTCCACGTCTGTCTTCTGCTCCGAGTTGGGCCTGGAGAGGATTATGGAATATATGAGTGAGAAGTTCTCCATGAAAAGTGCAGCGATTAAAGGCACTGATTTCTACATAGGAGCCGGCGGGATGGAGAGCCTGGACAGCGTGCAGTTTTACAACAAGACCCCCCTGAAGTGCGTCCAGACTTTCCACCTCCAAAGCAGTGAGCACCCAGGAGCATCTCCCTGTGAGGACCACCCCGCAAATTATGGAGTGCAAAAATCCGAGGAGGAGAGTCTGCACACCGACCTGGGGAGGTCCATGGAGAACTGCTGCAGTTTGAGAGGGTCGCCGGGGACACCAGGGCCCGAGAAGACGGACCTGGACGACCTGGGGGAGAAGTGCGACAACAACGTGTCCAGCAGCAAGAAGAGGCGGCACAGGACCACCTTCACCAGTATCCAGCTGGAAGAGCTGGAGAAGGTCTTCCAGAAAACTCACTATCCAGATGTGTACGTGCGGGAACAGCTGGCCATGAGAACAGAACTCACGGAAGCCAGAGTGCAGGTGTGGTTTCAAAACAGAAGAGCGAagtggagaaagagagagcgctATGGGCAGATTCAACAGGCAAAAAGCCACTTCGCAGCTACTTATGACATTTCGGTGCTGCCACGGGCGGACAATTATTCGCagATTCAAAACAATTTGTGGACGGGACCAGCCCCGAGTGGTTCTGTGGTTTCGTCTTGCATGATCCCATGTGACTCCTCTCCCTGTATGACATCATACCCACATTCACCCCGGAGTGAGCACGGATATGTGGGTTTTCCCAACCAGCAAAATCAGTTCAGCCACGTTTCCCTCAATAACTTTTTCACGGACTCTTTGCTCTCCACGACCCCAAATGGACATGCCTTCGAGACAAAGCCAGAGTTCGAGAGGCGGTCCTCCAGCATCGCAGTCCTTCGGATGAAAGCCAAGGAGCACACGGCTAATATTTCATGGGCTGTG

Function


GO: NA

KEGG:

id description
K09334 ALX1, CART1; ALX homeobox protein 1

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00006748 True 989 mRNA 0.53 4 17860132 17864658

Neighbor


gene id symbol gene type direction distance location
AMCG00006749 NA coding upstream 4742 17817815 ~ 17855390 (+)
AMCG00006744 LOC106561381,LOC108414015,LOC106573180 coding upstream 295494 17537677 ~ 17564638 (+)
AMCG00006742 NA coding upstream 393997 17407029 ~ 17466135 (+)
AMCG00006738 NA coding upstream 716692 17137157 ~ 17143440 (+)
AMCG00006739 NA coding upstream 739407 17101722 ~ 17120725 (+)
AMCG00006751 NA coding downstream 74244 17938902 ~ 17942224 (+)
AMCG00006750 NA coding downstream 98743 17963401 ~ 17964771 (+)
AMCG00006753 NA coding downstream 453035 18317693 ~ 18339457 (+)
AMCG00006752 LOC107577127 coding downstream 504006 18368664 ~ 18400191 (+)
AMCG00006769 LOC108263977,LOC108444204,LOC107665551,LOC107559415 coding downstream 1672675 19537333 ~ 19541966 (+)
G111941 NA non-coding upstream 996777 16863156 ~ 16863355 (+)
G111909 NA non-coding upstream 1049662 16779402 ~ 16810470 (+)
G111898 NA non-coding upstream 1138084 16714818 ~ 16722048 (+)
G111788 LOC106576514 non-coding upstream 1990331 15849921 ~ 15869801 (+)
G111786 NA non-coding upstream 2075370 15784519 ~ 15784762 (+)
G112106 NA non-coding downstream 350135 18214793 ~ 18215048 (+)
G112181 NA non-coding downstream 829220 18693878 ~ 18694311 (+)
G112182 NA non-coding downstream 830501 18695159 ~ 18745217 (+)
G112207 NA non-coding downstream 1036281 18900939 ~ 18903543 (+)
G112233 NA non-coding downstream 1230970 19095628 ~ 19100398 (+)
AMCG00006672 NA other upstream 3920657 13933666 ~ 13939475 (+)
G111197 NA other upstream 4816684 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 5208317 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 5536854 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 8291856 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 3072839 20937497 ~ 20944977 (+)
G112567 NA other downstream 3183678 21048336 ~ 21049038 (+)
G112600 NA other downstream 3278207 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 3400595 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 3752974 21617632 ~ 21622508 (+)

Expression



Co-expression Network