AMCG00006753


Basic Information

Item Value
gene id AMCG00006753
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 18317693 ~ 18339457 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006753
ATGGATGCGGAAGGACGTGAGTTGAACTGGAGACAGAGCCGCTCTCTGGAGGCGAGTTCAGCCATGATCGAGGAGTCCCGCCCTAAACCTACACCTGTGTCCCCAAGACAATAGACATACCCAAGCAACAACAAcgacaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaatttccAAACCGAAACAaactacaaatACGTGCTGTATAAATACCTGCAGGAGACGATGCGCAGACTGGGCTCAGTGCAGCAAAAGATACCGTGTGTTTTTGTGACTGAAGTGAGAGACGAGCCGTCCCGAAAGCGAGAGAGTCAGCACTTCCAGGTGTTGGCCACAGAGCACTTGAACCCGAAGGCACTGGGGTCAGATGTAGAGAGTGCCATTCCCACAGAGAAGCTTGATGGCACTTGTTGCTATGTATCCATTTACAAAGGCTGGGTTCCAGTAGAGAGATACAATAAGCAGTACTGCTGGCATTCGTCAGTGGTGAATTATGAGACTGGGGTAGGTCTGGTTCTGAGAACAAGCCCCGATGATGAAGAAGTGCTTGAAATTACTGCTGTTCCACTGTCTGAGCTCCTGGAAGAAACACTGGAACTAATAGGAACAAACGTCAATGCAAATCCTTATGgactGGGGTGTAAAAAGCAACCGATTCACCTTCTTGTACCGCATGGAAGCCTAAAAATTAGAAGTGCACCCTATGTCAATTACCAGCAGCTGTTTGGATGGTTTCAGAGATGTGAGGAAGGAAAAGTAGAAGGTATTGTTTGGCACTGTAATGATGGAACCTTAATAAAGGTAATTATTGCAGCTTTCAGAAAAGCATTTGCTACTTTCTTTTTGGTTGAAGCAGAGGTATAtaatatgcttttgtttttcttttttagcttCATCGTCATCATCTTGGTTTGAAATGGCCATTGGAGGAGACTTTCTTAAACTCTAGACCAGTTGTTATCCATGTGGACTTGACAAGGTATGGGTGGGAAATGGCACAAGATTTGTTCACTGCTTTCTCAAGACTGAACGGACAGAAGTTTGATCATATACAGGACATTAAATTTGATGTataagaaaatgcaaaacaattacaataacataGATATTGAAACTGTAAATGCATTCTCTTCAGATTGATATGGTTACAAGTTGTCAAAGGAGACAACGAGGTATTTTTTGATGATAATCAACACAATTGGAAGTAATGGCTTCTTTCAGGAACTGTCACAAAAGCACTATATTGAAGGAAAACACTTTAAAAGGTagaaaggaaagcaaaacacTACACCACAACACTTTCTGAAATACCCTTTCCTAAAAATTGTATGAAATCCAAAAACATTCCATTGTAATGACCAttccattcaattaaaacaataattctccactgtattttatgtcaaataaaatcaaagcatttttttaaacaagacaaTAATAAGAAACATGATATACGGAAGTTACATGTAGGCCTGGATGAAATCCAAGATTTGACCCACACaccaattgcaaattacaaacccagtaATAGAGTAAAGAAACCAACTGACAATAAGTTTGCGATTGGTGAGTTAatctaaatatgaattaatctgGCATAAAATGTGAACAGTGCTTTGTTTTAGCacctaaattaaataataatctaagcTATGAGATAGATGTACATCACTCAAAATAGTATTCtcagtttacatttaaacaaaataatattatgtaaGATACAACTAAATCAGAAAAAATGTCTCAGTCTTTCTAGGCCTCCACTGGCATATCATTGATTTAGGATCTTTTTagtttataatttaatgaaatcatAACACAATATTGAAAGATTCTGCAATGAATTGGCTACATACTATTGAAAGTCCATTGTTAACATAAGATGAAGATTGACCAGATTTGAATCGTGCCCCCTGTTCCTGTTCCCATTACTGCATGTGTGCTGAAGCTCCTTTTCCAAAAACCTAAATACTGTACATAGGTGGAGatgtttatcatttaaaaaacttaaatacagtttctctttattatgatgatttttattatgaatttacTTCAGatacaaaatgttcaaaactCTGTTGGAAAAATACATAGCCTCTGTAAAtacttgctttaaaataactgtacaaatgaataaacaaatgcaactcTGAAGCCTATTTCTAAATGTcttctgtatatataaagatatatatatatatataca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006753 True 2254 mRNA 0.37 6 18317693 18339457

Neighbor

gene id symbol gene type direction distance location
AMCG00006750 NA coding upstream 352922 17963401 ~ 17964771 (+)
AMCG00006751 NA coding upstream 375469 17938902 ~ 17942224 (+)
AMCG00006748 NA coding upstream 453035 17860132 ~ 17864658 (+)
AMCG00006749 NA coding upstream 462303 17817815 ~ 17855390 (+)
AMCG00006744 LOC106561381,LOC108414015,LOC106573180 coding upstream 753055 17537677 ~ 17564638 (+)
AMCG00006752 LOC107577127 coding downstream 29207 18368664 ~ 18400191 (+)
AMCG00006769 LOC108263977,LOC108444204,LOC107665551,LOC107559415 coding downstream 1197876 19537333 ~ 19541966 (+)
AMCG00006772 grm3,LOC107090533 coding downstream 1215946 19555403 ~ 19568758 (+)
AMCG00006770 LOC106594134 coding downstream 1271862 19611319 ~ 19621286 (+)
AMCG00006771 NA coding downstream 1296660 19636117 ~ 19642171 (+)
G112106 NA non-coding upstream 102645 18214793 ~ 18215048 (+)
G111941 NA non-coding upstream 1454338 16863156 ~ 16863355 (+)
G111909 NA non-coding upstream 1507223 16779402 ~ 16810470 (+)
G111898 NA non-coding upstream 1595645 16714818 ~ 16722048 (+)
G111788 LOC106576514 non-coding upstream 2447892 15849921 ~ 15869801 (+)
G112181 NA non-coding downstream 354421 18693878 ~ 18694311 (+)
G112182 NA non-coding downstream 355702 18695159 ~ 18745217 (+)
G112207 NA non-coding downstream 561482 18900939 ~ 18903543 (+)
G112233 NA non-coding downstream 756171 19095628 ~ 19100398 (+)
G112259 NA non-coding downstream 1056460 19395917 ~ 19396197 (+)
AMCG00006672 NA other upstream 4378218 13933666 ~ 13939475 (+)
G111197 NA other upstream 5274245 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 5665878 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 5994415 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 8749417 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 2598040 20937497 ~ 20944977 (+)
G112567 NA other downstream 2708879 21048336 ~ 21049038 (+)
G112600 NA other downstream 2803408 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 2925796 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 3278175 21617632 ~ 21622508 (+)

Expression


Co-expression Network