AMCG00006760


Basic Information

Item Value
gene id AMCG00006760
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 18653504 ~ 18688236 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006760
GAGGACCCTTCTCTAGATCGTAATTTTAAAGGTCACAAAGATGCTGTCACCTGCGCAGACTTCAGTCCAACTAACAAGCAGTTGGCGACTGGGTCAGCAGATACATTCCTGATGATTTGGAATCTGAAACCAAAGGCCAGAGCATTTCGTTTCATGGGTCATAAAGATTTTGTCACCAGTGTCCAGTTCTCTCCATCCGGCAACTTGGTTGTCTCCGGATCTCGGGACAGAACAGTGCGGCTTTGGACGCCCAGCATTAAAGGCGAGTCAACAGTGTTCAAAGCTCACATGGCTACAGTGCGCAGTGTTGCCTTCTCCAAGGACGGGCAGAAGTTGGTGACGGCTTCCGATGACAAATCCGTGAAGGTGTGGAGCGTCCATCGCCAGCGCTTCCTATTCTCTTTAAACCAGCACACCAACTGGGTGCGCTGTGCCCGGTTTTCACCAGACGGACGGCTCATCGTCTCTTGTGGTGACGACCGGTCGGTACGGGTATGGGACACGACAAGCAGACAGTGTGTCAACACCTTTACGGACTATGGGGGGTCAGCAACCTACGTGGACTTCAATTCCAGCGGGACCTGTATAGCCTCCTCAGGGTCAGATAACACCTTGAAAATCTGGGATATACGTACAAACAAGCTCCTGCAGCATTACCAAGTTCACAGTGCTGGGATCAACTGCTTTTCCTTCCACCCTTCTGGTAACTACCTCATCAGTGCATCCAGTGACGGCACCGTAAAAATCCTGGATCTGCTGGAGGGGAGGCTTATTTACACCCTGCACGGGCACCAGGGTCCTGTCCTTACTGCAACTTTTTCTAGTGGAGGGGAATACTTTGCTTCAGGAGGCGCTGACTGTCAGGTTTTGTTGTGGAAGACCAACTTTGATGCGTTTAACTACAAGGAAATTCTAAAAAAGCACAACAGCCGTATCAATCCAGACCCACCCCCACACCTGAGCGACATCCACCCCCGGATGCCCCATCTGCACACAGCGCGCGACGCCTGCATCGAGATTGGTCCCTTCGTGGCAGATACACAGACTCCAGATCCGCGGGTCGTTGAATTAGGGCAGTCTCTCTTTTCAAACACGGGAGGAAGCAGGCGTGAGAACGGAGATCCAGGACCTAGTGGCTGGCCCGACTGTAACACTTTCCAACCTCCGCACCGGTCTACTGGAGGacaggaggaagagggggagacgTGTGCCGTGACCTTTCCCTTGGAGGAGCGCACGGGCTTCCCGTCGGGACTTGCCCGGACTCTGGAGCAGATTGTGGAACAACTGGATGTCTTGACACAGACGGTTTCGGTGCTGGAGCAGCGGCTGACTCTCACTGAGGACAAACTGAAGGAGTGTTTAGCCAATCAGGCGCGGATCGTGCTGCAGGTGCGAGAGGCCGAGGAGAGGGATGCAGAGATCAAATCTCACAGCTCTTCACTGTGTTCGGTGCTGAGCTGCGGCCGTTAG

Function

GO:

id name namespace
GO:0003014 renal system process biological_process
GO:0060287 epithelial cilium movement involved in determination of left/right asymmetry biological_process

KEGG:

id description
K16482 POC1; centriolar protein POC1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006760 True 1473 mRNA 0.54 12 18653504 18688236

Neighbor

gene id symbol gene type direction distance location
AMCG00006758 LOC107574886,LOC107572944,LOC107679613,LOC106573116,LOC107665720 coding downstream 6736 18642384 ~ 18646768 (-)
AMCG00006759 NA coding downstream 49842 18536049 ~ 18603662 (-)
AMCG00006755 NA coding downstream 167340 18415916 ~ 18486164 (-)
AMCG00006756 NA coding downstream 316452 18218916 ~ 18337052 (-)
AMCG00006757 NA coding downstream 435055 18218173 ~ 18218449 (-)
AMCG00006761 atp2b1,LOC103370548,LOC107690705 coding upstream 8505 18696741 ~ 18712396 (-)
AMCG00006766 NA coding upstream 199369 18887605 ~ 18903547 (-)
AMCG00006762 NA coding upstream 226766 18915002 ~ 18920800 (-)
AMCG00006763 NA coding upstream 250914 18939150 ~ 18962560 (-)
AMCG00006764 NA coding upstream 312691 19000927 ~ 19002781 (-)
G112140 NA non-coding downstream 244727 18399263 ~ 18408777 (-)
G112020 NA non-coding downstream 1325918 17108977 ~ 17327586 (-)
G112024 LOC103376870 non-coding downstream 1517988 17128317 ~ 17135516 (-)
G111945 rs16,rps16,LOC103382554 non-coding downstream 1751967 16898419 ~ 16901537 (-)
G111940 NA non-coding downstream 1790537 16862677 ~ 16862967 (-)
G112195 NA non-coding upstream 6836 18695072 ~ 18745217 (-)
G112205 NA non-coding upstream 195392 18883628 ~ 18886046 (-)
G112270 LOC100136012 non-coding upstream 720583 19408819 ~ 19418420 (-)
G112287 NA non-coding upstream 826563 19514799 ~ 19515004 (-)
G112288 LOC108263977,LOC105018424 non-coding upstream 848969 19537205 ~ 19537793 (-)
AMCG00006754 NA other downstream 286942 18339270 ~ 18366562 (-)
G112059 NA other downstream 1020059 17632891 ~ 17633445 (-)
AMCG00006719 NA other downstream 2756635 15881130 ~ 15896869 (-)
G111767 LOC107575789 other downstream 2900269 15752821 ~ 15753235 (-)
G111621 NA other downstream 3899534 14712017 ~ 14753970 (-)
AMCG00006773 tmem243b,tmem243 other upstream 934919 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 944857 19633093 ~ 19635925 (-)
G112420 NA other upstream 1547620 20235856 ~ 20236206 (-)
AMCG00006807 NA other upstream 1959084 20647320 ~ 20653659 (-)
AMCG00006813 NA other upstream 2165821 20854057 ~ 20964562 (-)

Expression


Co-expression Network