AMCG00006764


Basic Information

Item Value
gene id AMCG00006764
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 19000927 ~ 19002781 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006764
ATGACAGAGTGGAAGAACATCTCCAAGAAACAGGAGAGTTTCACAGTGATCCCTACTtcaagtatttcagagaaaaataatggTATTCAGACTAAGGGGTTCCTAAAGGAAGCAAGAGTCTCCACAGATGGCATTAAGAAGAACATCTCCTTGCCTTTCAACATGACATTTAACTCAAATTCCTCCCAAAGGGAAAGTGAAGTGTATGTTCCTGCTTCTTTAGAGCTAAAGCTCTCCCCATCCGCTGTGGAGGTCATCGGCTTGAGCTCGACCACACGAGAGCAACATCCCGAGGAGCAAATCACAAGAGGTGTGAACAGAAAGTCAAAGCCTAAAAAGGGGACAAGCTCCCCAGCCAATGACCCCAAGGCCAAGAATAACAAGTTATCTCATTCAAAGAGAAACAAGAACTCTATCAAGAAccacaaagcacaaaaaaaagccaagacgaaagcaaaactgaagaagaagaagaaaaaaaagacatattttccatattttaaagacaattaCTGTCCCCCAGAATGCGCTTGTTATGGAAGgGTGGTCCAATGTTCTGACAAAGGAGTGGATAAAGTCCCATATGGCATTCCATACAATGCCAGGTACATGCTTCTCATGAACAACAAGATAGACATGATCCAGCTCGATCTACTGAATGAATACCTCTCTCTTGAGTTTCTGGTGCTCAGCAACAACCGCTTGACCGATGGGTCCATTGAAGGAGCCTTTGAGGGAATGATGAAGCTAAAAAGACTTTATATCAACCAAAATCTCCTGATCAGCATCCCCACAGACCTTCCTGCAACCCTGGAGGAGCTGAGTCTCAATGGCAACAACATTAGTGTCATGTCAAAGCAATCATGGTCCAGCTGTGAAAGTCTGCACATCCTCAGCCTCAACAATAACAGCCTGTCAAATGATTCCATCCCTGCTGGGATTTTTGGCTCCTTGACTAACTTACGCACTCTTAGTATTAACCACAACTATCTAACAGACGCCCCACACAGACTTCCCACTAATCTCAGAGAACTGTATCTGAGTGGAAATCAAATAGACAGAATTTCCGACCAGCTGTTTGCCGATAACTCTGACCTGCTTTTTCTTGATCTTGGCCACAACCGTCTCAAAAACAAAGGAATAGATGCAATTTCCTTCCGGCACATGGCTAAACTTGAGAACCTCAATCTAGAGAGAAATTTCCTCACTCAGGTCCCAAAGCATATTCCACGTGCCTTAAAGACCCTGAATCTTGAGGGCAACCGGATCAGCTCAGTGAGtaaaagtgttttcttaaaACTGGCAAACCTGGAGCAACTCGGGCTGTCTAAGAATAAAATTGCCAAGGTGGCAGCGGGCGCTTTCAAGGGACTGTCTGCATTGCACCTCCTAGATGTTAGTCACAACAATCTCCTTGAAGTTCCCCGGCAACTCCCTGCGACACTGCACTCCATAGCTCTAAATTATAACCAGATTCGCTTGATCCCTCTGGACTCTTTTTGTGGACACAGCTTTTCACAGAGCAATCTAGTCCTCGTCCATTTGGAGAACAACCATATTGACATGGGGGAGATTGACAGTCATGCATTCAGGTGCCTCAGAGGCTTTCAAATTGTCCACTTCTAA

Function

GO:

id name namespace
GO:0072329 monocarboxylic acid catabolic process biological_process
GO:0017001 antibiotic catabolic process biological_process
GO:0019541 propionate metabolic process biological_process
GO:0019543 propionate catabolic process biological_process
GO:0009062 fatty acid catabolic process biological_process
GO:0019626 short-chain fatty acid catabolic process biological_process
GO:0046459 short-chain fatty acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006764 True 1626 mRNA 0.44 2 19000927 19002781

Neighbor

gene id symbol gene type direction distance location
AMCG00006763 NA coding downstream 38367 18939150 ~ 18962560 (-)
AMCG00006762 NA coding downstream 80127 18915002 ~ 18920800 (-)
AMCG00006766 NA coding downstream 97380 18887605 ~ 18903547 (-)
AMCG00006761 atp2b1,LOC103370548,LOC107690705 coding downstream 288531 18696741 ~ 18712396 (-)
AMCG00006760 NA coding downstream 312691 18653504 ~ 18688236 (-)
AMCG00006765 NA coding upstream 3599 19006380 ~ 19046061 (-)
AMCG00006767 NA coding upstream 92755 19095536 ~ 19134727 (-)
AMCG00006768 NA coding upstream 304350 19307131 ~ 19336296 (-)
AMCG00006775 NA coding upstream 400500 19403281 ~ 19407976 (-)
AMCG00006776 NA coding upstream 566953 19569734 ~ 19593231 (-)
G112205 NA non-coding downstream 114881 18883628 ~ 18886046 (-)
G112195 NA non-coding downstream 255710 18695072 ~ 18745217 (-)
G112140 NA non-coding downstream 592150 18399263 ~ 18408777 (-)
G112020 NA non-coding downstream 1673341 17108977 ~ 17327586 (-)
G112270 LOC100136012 non-coding upstream 406038 19408819 ~ 19418420 (-)
G112287 NA non-coding upstream 512018 19514799 ~ 19515004 (-)
G112288 LOC108263977,LOC105018424 non-coding upstream 534424 19537205 ~ 19537793 (-)
G112289 grm3,LOC108263977,LOC108444204 non-coding upstream 538322 19541103 ~ 19541968 (-)
G112290 grm3,LOC107090533,LOC106924857 non-coding upstream 562175 19564956 ~ 19566015 (-)
AMCG00006754 NA other downstream 634365 18339270 ~ 18366562 (-)
G112059 NA other downstream 1367482 17632891 ~ 17633445 (-)
AMCG00006719 NA other downstream 3104058 15881130 ~ 15896869 (-)
G111767 LOC107575789 other downstream 3247692 15752821 ~ 15753235 (-)
G111621 NA other downstream 4246957 14712017 ~ 14753970 (-)
AMCG00006773 tmem243b,tmem243 other upstream 620374 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 630312 19633093 ~ 19635925 (-)
G112420 NA other upstream 1233075 20235856 ~ 20236206 (-)
AMCG00006807 NA other upstream 1644539 20647320 ~ 20653659 (-)
AMCG00006813 NA other upstream 1851276 20854057 ~ 20964562 (-)

Expression


Co-expression Network