AMCG00006765


Basic Information

Item Value
gene id AMCG00006765
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 19006380 ~ 19046061 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006765
ATGACAGCTGTTCACAGAGGGCTGTCTGTGGTGCTGGTGCATCTCTGGGTCCTGTGGAGTTCAGCACTGGCAACCGGGAGCAACCATCCAAGACTGAGACTATCTCACAAAGAACTCTGGGACTTGAACAGAACCTGGGTGTTTCACGGACCACGGACCTTTTTGGACCTACAGACAATGTTACTTGATGAGAATCAGGAGCGGCTGTTTGTAGGAGGTCGCAACCTCATATATTCTCTCAACTTGGACCGAGTAAATGAGGAGTACAGAGAGaTCCACTGGCCTAGCACAGAAACACAAGTAGAAGAATGCCAAATGAAAGGCAATGACAAGTTTGAGTGTGGCAATTTTATCAAAATCCTTCAGCGGTACAACAGAACACATCTACTGGCATGTGGAACGGGGGCGTTCGATCCCATCTGTGGCTTCGTAAGGGTAGGACATCGGACAGAGAATGACCTTGGAGGTCAAAGGATGCTGGTAAATAAATGGACCTCTTTCATAAAAACACGGCTCGTCTGTTCTGTCCCTGGAAGCAACGGAATTGACACATGTTTTGATGAGCTTGAGGATGTGTTCCTACTCAAGAAGAAAGATGAAAAGAATCCAGAAATCTTTGCTTTATTCAGCACTACAAGCAATGTGTTTAAAGGGTATGCTGTGTGTGTCTACCATATGAGTGACATCCGAGCTGCATTCAATGGGCCGTTTGCACATAAAGAGAGACCAGAGTACCAGTGGACGGCCTTTGAGGGAAAGTGCGCCAGCAAGATGAATGGAGGTCAATACTCCAGCTCCAAGGAGTACCCAGACGATGTTCTTCATTTTGTACGAGGTCACCCTTTAATGTACCAGCCTGTCTATCCCGTTCACAAGAGACCAATTCTCCTCAAAACGGATGGAGAGCAAACCCTCAGACAAATAGCTGTGGACAGAGTGGAAGCTGAAGATGGACActataatgtgatttttattggAACAGaTAATGGTACTGTACTAAAAGTAATCACACTATACAATAAGGAAAGGGACAGTGTGGAGGAAGTCCTTCTGGAAGAGTTACATGTCTTCaaggttccAGAACCAATCATAGAAATGGAAATCTCGACTAAAAGGCAACAGCTTTACATTGGCTCCAAGTCAGCGGTGGCTCAATTGAAGGTGCATCAGTGTGATTTGTATGGATCAGCTTGTGCCGACTGCTGCCTGGCTAGAGACCCGTACTGCTCCTGGGACGGAGTGTCATGTTCCAGGTATTATCCCTCCGGATTGCTCACAAAAAGTGGGCAGAACAGAAATGAAGATGAGTCTCAGAAGGCTGCTGTGGCCATGGTTTATGGAGTTGAGCACAACAGTACCCTACTTGAATGCACTCCAAGATCTCTCAAGGCAAAAGTTCTCTGGTTCTTGCAAGGGAGTCCTGACATAAGAAAGGATGAAGTAAAAACAGATGAAAGGATAGTGAAAACGGAACACGGTCTCTTGTTTCTGAAATTGCGAAAAACGGATGAAGGCACCTACCTCTGTCAGACTGTGGAGAATGGCTTCAGCAACACAGTGGTGAAAATTACTCTGGAGGTCCTGGAAGAGGACCGGATCGAGGAAATGTTTAACAGAGAGGAGGAAGATGAGACTCATCAAAAAACGCCATGCCCAGCACCCCCTGGCATTCCTCAAAGCTCTTCCAGGACTTGGTACAAAGAGTTCCTTCAGTTGATAGGATACAGTAACTTTCATAAAGTAGAGGAGTACTGCGAGAAGGTGTGGTGCACCGACAAGAAGCGCAAGAAGCTGAAGGCAATGCAGCCAAAATGGAAATATTCCAATTTGCCGGAGAAGCGAGGGAAGATAAGAGCAGAACACCATCGGATGCCTAGACATGCCTTGGATACCTGAAGACGGAGGGCAAATTTCCCTCATGAACAATgcttttgaataattaaaaacgaaacaaaaactGTTTACTGATGGACAATTATTTTACTCAAGAAACGTTCAAAAGCacattgtaaattataattatatgtcTAACAGAAGAATTTAGTATTACTTTAGTTACTGTATaccaatatttaattgaattagacTGGAAATATTAAGgtactatttaaatgttattaacttAATActgtcaaaatattatttaaaaaaaatgtaaaatgtcattCATCCTCAATCAAAATTGAAGCTGTATAAGAGGCACTCTGGCCATTCAACATAATTTTAAAGCCAGTCCTTCAAAAACATGGTATGAATGAACACGTTCGTGATATAGATGAATGTGGACTCAATATGTCATGTTAACTATTTGTGTAAGTGAAACACAAATTGAAAAGTCtcacaataatataaaagtagatcataaaatataatcttccAGTCACTAATGTCAATGACAATATGTGGACTTTTAAACCGTGCTGTTAACCACAGTTTGACTTTTTCCATGAATGATATTACTGTAGTGGAATGAAAGTTAATACAACAGTGTTTCAGAGGCACACACAATAATTCAGTTCATGCTTAAAtcatgtgaaaaaaaatgtcaccAAGTGCTGCATAGTAGACATGGAGCAGACACATACATACCTTGTgtgttatttcacaaaaaatgtTGGGTAACAAACTCTAATCTCAGTGGTATTTcaagaaaatgtcaaaacaacCTGCCCTCAAATTGTACATTGTAATTTACCATTTGCAGGTCATTTTAAGTTATTCCCTTTACTATGCACTGTTACAGACCCTGCTCTAGATACTGCAATCTCATGTGAGGGGAAGTTCAACATGTCGGAGTATCAGACAATATATAAACCCAACTATAtagtactgtgctgtattgaaATAGTAATTGTAGAAGAAGTGAATACACAGCTTTCTGGATAAAAATGACACCTCATAATGTACAGTCCTATCAGTTTCAGGAGATATTGAAATTAATCCATCCAGAAGGCATTTGGATGAGACTATGCACTCCCTTTTTATTTGCTCATTacactgttttaatttatatgaacAATGCATCTGAGATCCTTGGCTCCACTTCACTCATAAAAAAGGtacttgttttcaaatgtttatgtaATGTAAGAAATGGAAAAGTGACTTGTGTTTATGTATAACTGCATGCTCTTAGAGGTGGAGAAAGTGTAGGTTGGCACATACTTTATCTTTCATGCTTATGACACGCATGTAAGAAACGTGCACACACACTCTTTGATCAGTTCAGTACTATGAGACACCTTGTAATAAGCTTGAATGATATACTGTAAACAAAAGTATTTACATTGTATAGCTGTGGTTATATAAATCCTTGTATCTACACAGTGGTGTTACTGAAGTAGTGTTTATCCTATAAGACGTAAAGTACCtcttgtacatgtttttttctgtctctcttttttcaGTTCCTGCATATAATGTTGTGAAATGCATGAAGGTCTTTAAGTGCTTAATGAGTTTTCTGTGAGAACAGGGTGTTTAGTAATAGACATTTGTTATCTGTGAGGCATTTTCAcacaaatagtaataaaataataataaatattaataataaacacaactctgtgtattggtcagaATTGACAGAAAGCAtgaataaatgattaaaaaataaataaataaaac

Function

GO:

id name namespace
GO:0002040 sprouting angiogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006765 True 3627 mRNA 0.39 14 19006380 19046061

Neighbor

gene id symbol gene type direction distance location
AMCG00006764 NA coding downstream 3599 19000927 ~ 19002781 (-)
AMCG00006763 NA coding downstream 43820 18939150 ~ 18962560 (-)
AMCG00006762 NA coding downstream 85580 18915002 ~ 18920800 (-)
AMCG00006766 NA coding downstream 102833 18887605 ~ 18903547 (-)
AMCG00006761 atp2b1,LOC103370548,LOC107690705 coding downstream 293984 18696741 ~ 18712396 (-)
AMCG00006767 NA coding upstream 49475 19095536 ~ 19134727 (-)
AMCG00006768 NA coding upstream 261070 19307131 ~ 19336296 (-)
AMCG00006775 NA coding upstream 357220 19403281 ~ 19407976 (-)
AMCG00006776 NA coding upstream 523673 19569734 ~ 19593231 (-)
AMCG00006777 LOC107743993 coding upstream 597557 19643618 ~ 19646890 (-)
G112205 NA non-coding downstream 120334 18883628 ~ 18886046 (-)
G112195 NA non-coding downstream 261163 18695072 ~ 18745217 (-)
G112140 NA non-coding downstream 597603 18399263 ~ 18408777 (-)
G112020 NA non-coding downstream 1678794 17108977 ~ 17327586 (-)
G112270 LOC100136012 non-coding upstream 362758 19408819 ~ 19418420 (-)
G112287 NA non-coding upstream 468738 19514799 ~ 19515004 (-)
G112288 LOC108263977,LOC105018424 non-coding upstream 491144 19537205 ~ 19537793 (-)
G112289 grm3,LOC108263977,LOC108444204 non-coding upstream 495042 19541103 ~ 19541968 (-)
G112290 grm3,LOC107090533,LOC106924857 non-coding upstream 518895 19564956 ~ 19566015 (-)
AMCG00006754 NA other downstream 639818 18339270 ~ 18366562 (-)
G112059 NA other downstream 1372935 17632891 ~ 17633445 (-)
AMCG00006719 NA other downstream 3109511 15881130 ~ 15896869 (-)
G111767 LOC107575789 other downstream 3253145 15752821 ~ 15753235 (-)
G111621 NA other downstream 4252410 14712017 ~ 14753970 (-)
AMCG00006773 tmem243b,tmem243 other upstream 577094 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 587032 19633093 ~ 19635925 (-)
G112420 NA other upstream 1189795 20235856 ~ 20236206 (-)
AMCG00006807 NA other upstream 1601259 20647320 ~ 20653659 (-)
AMCG00006813 NA other upstream 1807996 20854057 ~ 20964562 (-)

Expression


Co-expression Network