AMCG00006766


Basic Information

Item Value
gene id AMCG00006766
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 18887605 ~ 18903547 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006766
GTTGAACAGCAACGCCAAGATGTTTGCAAGCATTGCTGTTTTGCTACTGGCTGCTTCGGTCTGGTCTCAAGATATGTCTTATGCTGAATATCTTGAACAAATTCAGGCATGTCCAGAGGAATGCCGTTGTCCACCTAGCTTTCCCAATGCTGTTTATTGTGACAGCAAGGGGCTGAAGCAGATACCCAGCATCCCCCCCTACACCTGGTACTTGTATCTCCAAAACAACCTGATCGATGTTGTTTCAGAAAAGTCCTTTAAGAATGTCACGCAACTCAAGTGGATCAACTTGAACAAGAACAAGATCACCAATAACGggattgaaaaaaatgtatttcaggaaATGACAAGTctgctgtatttgtatataGAAGATAACCTGCTGGACGAAGTGCCCTCTCTTCTTCCAAAAAGACTGGAACAACTGCGACTATCAAGGAACAGAATCTCCAAAATCCCTCCTGGGGTCTTTGATGGCATGGAAAACCTTGCAATGTTAGACCTTCAAAACAATAAGCTGGAGGATTCAGCCATTACAGAAAATACCTTTAAGGGCACGAAGAATCTCGTCCAGATCAACCTGTCTAAAAACAATCTGAAGAAAATGCCTGCTGGATTGCCTTCAACTACCTTGCAGTTATTCCTTGATAGCAACTCAATTGAGAAAATCCCTGACAACTACTTCAAGGAAACACCAAAAGTTTCCTTCCTTAGGCTTAATTATAACAAGCTTGCTGATGGCAGCCTTCCAAAGAACATCTTCAACATCTCCACCATCCTCGACTTGCAGTTATCTCACAACCAGCTCACCCAAGTGCCTCAGTTCCATTGCAGCCTGGAACACCTCCATCTCgatcataacaaaataaaaagTGTTAATGGTAGTGACATATGCCCTCTGCCTGTCGGTATCGTTGATGACTACCATGATGAAAAGACGCCACGTCTACGTTACCTTCGTCTCGATGGCAATGAGATAAAGCCGCCCATTCCAATGGACCTCATGATGTGCTTCCGACTTCTACGGGCTGTTGTATCGTGCAATGAAAAGCGCAAGCGGAGGAGTTTAAATAGGGCTACGGACTTATTCCTTGCAGTTTACCCAGCAGGGGTTGGGATCATGAAGACCTTTGTGAATTTAGTACTGGGTCTATTTATTGTGAAGGCAATTGTTGCTGCTCCATCAAGGCAAGTGAGACAGACCCCAGGCAGATATGACGCGTCAAACTATGATGTAGATTTGGAAAAACTGAACTTTGAAGATCAAGACATCTATGAATATGAGGATGAACTTACAATTGATGAACCCCAAATTGAGATTGGCACCCTTACTCCCCCGGTGGGCGAACCCCTGCTTCCGGATGAGGAGGTCCCCCTCAAGCCCCACACCCCAGTCCAGAGCACCGGAGGCTCGGGGGTGCTAGGACCAGATGCACAGGGAGATTTGCCTACCTGCTTGCTGTGCACCTGCCTGGGAGGGTCCGTCTACTGTGATGATGTGAAGCTCGAGACAGTTCCCCCTCTTCCAAAAGAGACGACCCACTTCTATGCCCGCTACAACAAGATCAAGAAAATACACAAGTCTGATTTTGCAGAGATGAacAAACTGAAGAGGATCGATGTGACCAGCAATCAAATCACTGAGATCGATGAGGATGCCCTCAGGTCCCTGCCTCAGCTGGAGGAGTTGGTGGTGCGAGATAACAAGATCCGCCAGCTGCCCGAGCTGCCAAACACCATGACTCTGATCGACGATATGAATAACCTGCTGTACCTGTATGTCACTGACAACAGCCTGGACCACATTCCTCTGCCACTGCCTCATACCCTGCGCTCCCTTCACCTGCAGAACAACAACATTCAGATGATGCATGAGGACACGTTCTGCAATTTGAAAGATATCAACTACATTCGCAGATCCCTGGAGGATGTCAGACTGGATGCCAATCCCATTAACCTCAGTAGGACCCCACAGGCTTATATCTGCCTGCCTCGTGTGCCTACTGGACGGCTTTACTAAATctttggggtgtttttttttttttttttttttttttttttttat

Function

GO: NA

KEGG:

id description
K08123 KERA; keratocan

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006766 True 2065 mRNA 0.46 10 18887605 18903547

Neighbor

gene id symbol gene type direction distance location
AMCG00006761 atp2b1,LOC103370548,LOC107690705 coding downstream 175209 18696741 ~ 18712396 (-)
AMCG00006760 NA coding downstream 199369 18653504 ~ 18688236 (-)
AMCG00006758 LOC107574886,LOC107572944,LOC107679613,LOC106573116,LOC107665720 coding downstream 240837 18642384 ~ 18646768 (-)
AMCG00006759 NA coding downstream 283943 18536049 ~ 18603662 (-)
AMCG00006755 NA coding downstream 401441 18415916 ~ 18486164 (-)
AMCG00006762 NA coding upstream 11455 18915002 ~ 18920800 (-)
AMCG00006763 NA coding upstream 35603 18939150 ~ 18962560 (-)
AMCG00006764 NA coding upstream 97380 19000927 ~ 19002781 (-)
AMCG00006765 NA coding upstream 102833 19006380 ~ 19046061 (-)
AMCG00006767 NA coding upstream 191989 19095536 ~ 19134727 (-)
G112205 NA non-coding downstream 1559 18883628 ~ 18886046 (-)
G112195 NA non-coding downstream 142388 18695072 ~ 18745217 (-)
G112140 NA non-coding downstream 478828 18399263 ~ 18408777 (-)
G112020 NA non-coding downstream 1560019 17108977 ~ 17327586 (-)
G112024 LOC103376870 non-coding downstream 1752089 17128317 ~ 17135516 (-)
G112270 LOC100136012 non-coding upstream 505272 19408819 ~ 19418420 (-)
G112287 NA non-coding upstream 611252 19514799 ~ 19515004 (-)
G112288 LOC108263977,LOC105018424 non-coding upstream 633658 19537205 ~ 19537793 (-)
G112289 grm3,LOC108263977,LOC108444204 non-coding upstream 637556 19541103 ~ 19541968 (-)
G112290 grm3,LOC107090533,LOC106924857 non-coding upstream 661409 19564956 ~ 19566015 (-)
AMCG00006754 NA other downstream 521043 18339270 ~ 18366562 (-)
G112059 NA other downstream 1254160 17632891 ~ 17633445 (-)
AMCG00006719 NA other downstream 2990736 15881130 ~ 15896869 (-)
G111767 LOC107575789 other downstream 3134370 15752821 ~ 15753235 (-)
G111621 NA other downstream 4133635 14712017 ~ 14753970 (-)
AMCG00006773 tmem243b,tmem243 other upstream 719608 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 729546 19633093 ~ 19635925 (-)
G112420 NA other upstream 1332309 20235856 ~ 20236206 (-)
AMCG00006807 NA other upstream 1743773 20647320 ~ 20653659 (-)
AMCG00006813 NA other upstream 1950510 20854057 ~ 20964562 (-)

Expression


Co-expression Network