AMCG00006767


Basic Information

Item Value
gene id AMCG00006767
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 19095536 ~ 19134727 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006767
AAATGTTGGATTCTAACAATCTAATTACCTTTAATGGCCTGGCTAACAGCTCCAGTTATCACACTTTCCTGCTGGATGAGGAAAAGGGCAGGCTATTGGTGGGAGCCAAAGACCATATTTTCTCCTTTAATCTCGTCAACATAAACAAGGACTACCTAAAGATTGCTTGGCCTGCAACTCCTACAAGAAGGGATGAATGCAAATGGGCAGGAAAAGACATCTTGAAAGAATGTTCCAATTTCATTAAAGTGCTGCAAACCTTTAACCAAACACACCTGTACGCCTGTGGAACGGGGGCCTTCCATCCCATATGCGCCTACGTTGAAGTTGGAAGACGTCCAGAGGACAATATCTTCAGACTTGAAACATCCCACTTTGAGAATGGCCGAGGAAAAAGTCCCTATGACCCAAAGCTGCTGACTGCTTCTCTTTTAATTGatGGAGAATTGTATTCTGGGACTTCTGCGGATTTCATGGGCAGAGATTTTGCCATTTTCCGTACGTTGGGACAACATCATCCAATCAGGACAGAACAGCATGATTCAAGGTGGCTAAATGATCCCAGATTTGTGAGTGTCCATCTTATTCCAGAGAGTGATAATCCTGAAGATgataaaatgtacttatttttccGAGAAAATGCAATGGATGGAGAGCACACCGGGAAAGCAACCCATGCTAGGATTGGACAGCTCTGTAAGAATGACTTTGGAGGTCACAGAAGCCTGGTCAATAAATGGACCACCTTCCTAAAAGCAAGACTCATCTGTTCTgaTGTCTTTCTGATGACCTCAAAGGATCCCAAGAACCCTGTTATATATGCTGTATTTTCAACATCCAGcAACATCTTCAAGGGGTCAGCAGTATGCATGTACAGCATGACTGATGTGCGGAGAGTGTTTCTTGGACCGTATGCACACAGAGAGGGACCCAATTATCAGTGGGTACCATTCCAAGGAAGAGTGCCGTACCCACGTCCTGGAACTtgcCCAAGCAAAACGTTTGGTGGGTTTGATTCTACTAAAGATCTTCCTGATGATGTCATCACTTTTGCAAGAAGCCACCCTGCCATGTACAACCCTGTCCATCCAATTAATAACCGTCCAATTATCATCAAAACTGACGTTGACTACCAGTTCACACAGATAGTGGTGGACAGAGTGGATGCTGAGGATGGGCAGTACGATGTCATGTTCATTGGAACAGatgTTGGCACGGTTTTGAAAGTGGTATCGATTCCTAAGGAGACCTGGCACGACCTGGAGGAGGTGCTATTGGAGGAAATGACTGTGTTCAGAGAACCTACTGCTATCACAGCCATGGAGCTTTCAACCAAACAGcaacAGCTCTATCTGGGCTCGGCCATTGGAGTTTTGCAGATGCCGTTGCACCGCTGTGATGTGTATGGCAAGGCCTGCGCTGAGTGCTGCTTAGCGAGAGACCCCTACTGTGCGTGGGACGGCACTGAGTGTTCCCGATACTTCCCCACTGCAAAAAGGCGGACGAGACGACAGGACATCAGGAACGGGGACCCTCTGACCCAGTGCTCAGATTTGCAGCATCATGACGACTTAAACGGACAAGGGACTTTGGAAGATAAGATTATTTATGGCGTGGAAAATAGCAGCACTTTCCTGGAGTGCAGCCCCAAATCCCAGCGTGCCCGCATCTACTGGCAGTTTCAGAAACAGAACGAGGAGCGCAAACACGAGATCAAATCAGAGGAAAGATTCATACGCACAGAACAAGGCCTCCTCATCCGCAGCCTGCACAAGAAAGATTCAGGGATTTACTACTGCCATGCAGTCGAGCATGGATTCATGCAGACTTTGGTCAAGGTCACCCTCGAGGTTATTGACACCGAGCACCTGGACGAGCTTCTGCACAAGGATGAAGAAGGTGAAGGAGCGAAACCAAAGGAGGGCCACGGCATCGTCCCACCCAACCAAAAAGTCTGGTACAGAGACTTTATGTCCCTCATTAACCATCCTAACCTCAACACTATGGATGAATTTTGTGAGCAGGTGTGGAAAAGGGAACGCAAGCAGCGCAGACAGAAAGCTGCCAATGCCCAAACGCACGCCAACAAATGGAAACACCTTCAGGAAAACAAGAAGGGCAGAAACAGGCGGACCCATGAACTCGAGAGGGCACCGAGGAGTGTCTGATACAGCCGTGTCATTCGAGAGACTGAATCTGAGTAGACTTTAAAAGAAACTCAACTggaaacaaatgcaatacaCTCCTGGTCTAAGTCATTGCATTGGTGAAGATGTTTACAATGGTTTATTGGAAATGACTGACAACACCATCTTGTGTTCATACTTAACCCTTTTGACTGGTCTCCATAACGAAACGATGGAAACTAAAACTCGGACTGTAAATATTCAACAGCAAGAACTATATTTGACATTGCTTTGggtttttagtttagtttagattCATAGTTCAGTTGTTATAATTGATTGCCATTCGCAAGACAAGTGTAAAACTAAAAACCGATGACGTTTTTTAAACGGACGTCGTCGTAAACTATATATTGAACTGATAAAGAATGACCGTACGAGTGTAAGAGGATGTTCATTATACAGTAGAAGGGTGTTTTGGATCTaatgtacagtataatacacCTGTCTGGCGCATTTGAAATGTCGATACAATGCTCTTTATATGTACTCAAGGTAACTGTGCAATTCCAATTTTCAGTACATCAAATTTCAACTAGTTCTTAGACAGCTCAAGACTTAATTGGTTgagtataatttaaaattgaattagcAAATACCAATAGAACAATATCATTTCAATTtccatctttgttttttcattttttaaaaccgTTTGAGAGCactgcatatttaaattaactcaCTATCAAAGTTGACAATATATCTCCTTTTGCCAAgttgtttttcaaagcaataGTTCTATAATGAAGTCCTATATGATATGAGGTAATCTATTTTAATACATCATCTGAATAAGCTCTTCCAATCCTGACATATATTTAAACTTGCTGCaaaaggaatattttatttttcattcaacagAGATCTATCTAAAAGTCATCTAACAGTATATAGTTGTacttgtatttcaatgtatatcTTCCTGCTTTACTACAAATACTACTGCATCCCAAAGGGGTAAAAAACTTTTACATTCTcaaacatttcttgtttttctttttatgtttctcttatttgaagatgcttttctaaattattttggACACTTTTTTCTGAGCTTTATGCACTGTAAACTGACAGATCTACAGTATAATAATGTGGGTATATATTATCCCAAATACATGCTCATCAatcatctgtttaaaaaaagaaacattctgtaatttattaatctGTACCTGGACTACAGTAAAAGGTTTTTTCTAATTATTGTAGCATTGACAAACAAGCTACAACgtcaaaatcaatcaaatgcCTATCAGGGAGAAGGACCAACTAATAatattaccttttttttaattcatgttatttttatcaaggcaaaaatagaaataaacactgaaactatttaatttaagttCTTATTTTTACAACgggatatgttttatttaacttatgtCAGACACGAGTGTAGGCCGgcaatgcttttgttttctgttttaaaaggtttttgaaTCAGCTGACTTAACAAGACTTTGCATTTCTATTCCTGTGCATACATCTGTGTTACtcgaaaaaacaaaacttggtCTCCATTGACTGAATTAAGATGAGAATCTGCAAAGGGTCTGCATTACGGACATTTGGGAATTTGAATTATTCTTTACACGGCTGATTAGGTAATTACAATTTGTATCCCAAATGTACAGAGAAATAACCGTtattaagggggaaaaaatgggCCATATATTCAAAAGAGCTGCATGTTTGCAAAAGGGGAGTTACagagtttattttatagatttttgtatttctttttccttGGAAATCTCAAGTTTGTGTCGTTGGGAGAACACCAAAATGGAAACTGTGTAGGAAAGAAGAGGTCTTGCACACTGTTCATCACAGCTGTCTCTTTTCAAATTTGGAGACGGGTTATTAAAAAGTATTCAAGTTCAACCGCAGAGTAagaaactttttatttttatgttttgattgtgTCGCATTACACGACAGTGGTACCACTGAATTTGTTTAACTTGTTTAAATGAGTCACATGACTTTCTACAGTTTGTATCATAAAAGTCCAGGGGAAAGATGCACATAAGGAGTTGTTGtacattatgtaaattaatacatatatgtagaCTATAAATGTTTAGGTCACCCTGGATGatactttcctttattttcctttattataatgattattattatttcattgtttacAAAAATTGTCCATCTGTATTTTTATCCAAATAAGAGACAGTGACCTTTAGAGCATCACACCATTAAACCAGATGTGTTATGACAAATATAATTAGTTGGTGAATAAACTGCAGTTGTTCACTGTAGCCcctattttattatgtatgttttttacatttggatTTATTCGTCCTCGCAAAATAATGTGCTGACACTTCTTCCAAATAGATTGCTTTTTTATCTGGAAAGCAAACTATTACTCCCATACATTCTCCAACTCGAGCAAGTATTTCTAGAGTTGCTTATAATGCCTGTTTAAGCTAGATCGTGAGTTTAAACCCGCAGTGTTTTGACAGACATTCCTCCTTTGAATTTTGCTGACTAACGATTTTAAGCAAGATGCTAACAAAGCACTAAGGGCTGCAAGAAACGTTTCTCAGATCCACAAAACCTTTGAATATATGACCCAAGTTATTTGATAAGTGGATGTATGTATCGGTGATTGAACACAACTCCTTATTTGGGAGAAAATAAACTCTAATGATGTCCCAGAGCTACAGCAACAAATGTAACCAGTCTTTAAGATGATGGCATGACTCCTCCAGCCAGACAGACTAATCTTGTTGAGCATGTGTTGGTTAAATATTCCCAACCTTAGAGCCACAATCATGAGCCAAGATCGCATTGTTCGTTTAGTGAACAACGGCAAAAGAAAGTGAACCAATATTGTCACAAAACCATAGATCAACATCAGTAACAACTAATGCATCTGGGGACATTGTCAGGCCTAAAAGGAGTTCAAGCTGTATCTCATTtgcaaacacagacaccagGCTCGGCCGTCCATCATTAACCAATGTTGCCGCCGGTGCTGATTGTCAATTACAATTAACAATCTATCAAAGTGACTGACATCCTGACAGCCTTGGCCCAATAATTACTGGTTAtctgggatttttttgtttctttgttatttcATAAAGTATGTATTGGATGTAGTACACGTTTCTACAATAAGCTCCCttgtttaagtatttattttatttttaatgaaaatgtgataCAGGAAGTGCTTCTGAAATAAAGCTCCGTTTAGACGTTATACCTTTGTTTCAAACACAATGTGATAGCATGGCGAACAGTGCCTGGCTATAGCTCGACTATGAATCATGCGGTTGTTTTTGAGGCCTTTCCTATTAAACCTGGTCAAATCTCACAATACTTCCAACTGTTGTAGCTCGTCTGCAGGCAGCCTGGACGTGGGGCTGGAAACTGTGAAACCAATTGTGTGGATCAGCACATAGAGGGCGTCAGGAGGATAGATACGTTTTTAAACACCAGCCACCTGAGCTGCCATTTCCCCCTGCCATTGCTGAACCTTAacagcaaaagaaaaggaattaaTGGTGGCCTATGtgcataataattattaaaagacTCGTAACGCAGTGTCTATATACACCTAGACCCCATTCATTCCCCCTCAGTAGCTTTCTTGTTCGTTTTGTTCCCAGGTCGCCCAAAGTTTACTTCTTAAAATGACAGGAGCGTAAAGATCGGAGAGTTTACACATTCTCTGTCTCGATACTTTTGTTGGATACATTTCATTATGCAAAATTAAGTATTTGCAAGATGGCTCTGTTTGCAAGATAATATATACCCTGAAAAGTAGCTgtgaatttaatgtaaaaaataaaatcatgtcatggtccaaacaaataaaaataaaagacactgTGTACAAATTGCATGTGAATGctattttaatgcatcaatttttatatatataatttagtattgACTAATGTTGTGTGTAATAGATCTGCCTTTTGCTTTATGCAGTACACATAAACCTGTTTTAaaggtgtatatatttttccttagGTAAATCAAAGGTACAGTGTAAAGTACTGGCATCCATAGGTACTCGATTCCAATGTGTTGTATATCACTTTTCATCTACTAATATACAACCATGTTCCCCACttggaaaaaagttatttaatatttcagtgcaaCACAGAACAGTATCCAGCAGATAGCATGGGTGTTTTATTAAGAGCAATGCATTTACATGACTGCTTTGCTCATTGCATTTCAGACGGTCTCTATGGAACTGGATGGAAATATAAGAGAAACTGCTGCTgtaaattattctttttttggCATGTATTcagttgttaaaataaacatttcttctTAAACATGAGGTTCTTGCTGTCTTTAATAATTGGAACGTGCATGCA

Function

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0016020 membrane cellular_component

KEGG:

id description
K06840 SEMA3; semaphorin 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006767 True 6583 mRNA 0.39 16 19095536 19134727

Neighbor

gene id symbol gene type direction distance location
AMCG00006765 NA coding downstream 49475 19006380 ~ 19046061 (-)
AMCG00006764 NA coding downstream 92755 19000927 ~ 19002781 (-)
AMCG00006763 NA coding downstream 132976 18939150 ~ 18962560 (-)
AMCG00006762 NA coding downstream 174736 18915002 ~ 18920800 (-)
AMCG00006766 NA coding downstream 191989 18887605 ~ 18903547 (-)
AMCG00006768 NA coding upstream 172404 19307131 ~ 19336296 (-)
AMCG00006775 NA coding upstream 268554 19403281 ~ 19407976 (-)
AMCG00006776 NA coding upstream 435007 19569734 ~ 19593231 (-)
AMCG00006777 LOC107743993 coding upstream 508891 19643618 ~ 19646890 (-)
AMCG00006780 NA coding upstream 544874 19679601 ~ 19781353 (-)
G112205 NA non-coding downstream 209490 18883628 ~ 18886046 (-)
G112195 NA non-coding downstream 350319 18695072 ~ 18745217 (-)
G112140 NA non-coding downstream 686759 18399263 ~ 18408777 (-)
G112020 NA non-coding downstream 1767950 17108977 ~ 17327586 (-)
G112270 LOC100136012 non-coding upstream 274092 19408819 ~ 19418420 (-)
G112287 NA non-coding upstream 380072 19514799 ~ 19515004 (-)
G112288 LOC108263977,LOC105018424 non-coding upstream 402478 19537205 ~ 19537793 (-)
G112289 grm3,LOC108263977,LOC108444204 non-coding upstream 406376 19541103 ~ 19541968 (-)
G112290 grm3,LOC107090533,LOC106924857 non-coding upstream 430229 19564956 ~ 19566015 (-)
AMCG00006754 NA other downstream 728974 18339270 ~ 18366562 (-)
G112059 NA other downstream 1462091 17632891 ~ 17633445 (-)
AMCG00006719 NA other downstream 3198667 15881130 ~ 15896869 (-)
G111767 LOC107575789 other downstream 3342301 15752821 ~ 15753235 (-)
G111621 NA other downstream 4341566 14712017 ~ 14753970 (-)
AMCG00006773 tmem243b,tmem243 other upstream 488428 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 498366 19633093 ~ 19635925 (-)
G112420 NA other upstream 1101129 20235856 ~ 20236206 (-)
AMCG00006807 NA other upstream 1512593 20647320 ~ 20653659 (-)
AMCG00006813 NA other upstream 1719330 20854057 ~ 20964562 (-)

Expression


Co-expression Network