AMCG00006769 (LOC108263977,LOC108444204,LOC107665551,LOC107559415)


Basic Information

Item Value
gene id AMCG00006769
gene name LOC108263977,LOC108444204,LOC107665551,LOC107559415
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 19537333 ~ 19541966 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006769
ATGGTGGCCCAGTTCCAAGCACTTTTCTTGATTTTATTCTCAAGAGGAATCCAACTCGCATTCAGTGATACCAGCTTCATTAGGAAAGAGATCAAGATCGATGGAGATCTCGTGTTAGGAGGTCTTTTTCCCATCCACGAAAAGGGCGTGGGAATGGATGAATGTGGGAGAATAAACGAAGAAAGGGGGATACAGCGCTTGGAGGCTATGTTGTTTGCAATCGATTCGATCAACAGAGATCAGTCTTTGCTACCTGGGGTCTCTCTTGGTGTGCACATCCTGGATACATGTTCAAGAGATACGTATGCTTTGGAGCAGTCCTTGGAATTTGTCAGAGCATCCCTGACCAAAGTAGATGAAACAGAATTTATATGCCCTGATGGCTCCTATGCTATCCAAGATAATAGCCCCTTAGTGATAGCTGGTGTGATTGGAGGATCCTACAGTAGCGTCTCTATACAGGTTGCAAATTTACTGCGATTGTTCCAAATTCCTCAAATCAGCTATGCCTCTACAAGTGCCAAACTGAGTGATAAATCCCGATATGACTATTTTGCCAGGACAGTTCCACCTGACTTTTACCAGGCCAAGGCAATGGCGGAGATCTTGAGATTCTTCAACTGGACCTATGTCTCCACCGTGGCCTCTGAAGGCGACTACGGGGAGACGGGGATTGAAGCTTTCGAACAAGAAGCCCGGCTTCGTAACATATGTATTGCCACCTCTGAGAAGGTGGGTCGATCCAACGTCAAGAAGTCATACGATGCTGTAATCCGTCAGCTGCTCCAAAAGCCCAATGCAAAAGTAGTTGTGCTCTTCATGCGCAGTGACGACACAAGGGAGCTACTGGCTGCTGCCAATAGACTCAACACATCTTTCACATGGATTGCCAGCGATGGTTGGGGGGCTCAAGAAAGTGTGGTCAAGGGAAACGAGAATGTAGCCAATGGAGCAATTACTTTAGAGCTCGCTGCCCATCCGGTCAAGGAGTTTATCAGATACTTCCAATATCTTAACCCTTTAAACAACAAACGAAACCCATGGTTCATTGATTTCTGGGAACAGAAGTTTCAGTGTGTCTTACAGAATGGAAACGCTCAACAGAAAGCCTGTGACAAACACCTGGCCATCGACAGCTCAAATTTCGAACCAGAATCCAAAATTATGTTTGTGGTGAATGCCGTTTATGCCATGGCTCACGCCTTACACATAATGCAACGCACCTTGTGCTCCAACACAACCCTGCTTTGTGACAGCATGAAGCCGCTGGATGGAAGGAAACTATACCGTGACTACTTGCTGAACATCAGTTTCAGT

Function

NR:

description
PREDICTED: metabotropic glutamate receptor 3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006769 True 1317 mRNA 0.46 2 19537333 19541966

Neighbor

gene id symbol gene type direction distance location
AMCG00006752 LOC107577127 coding upstream 1137142 18368664 ~ 18400191 (+)
AMCG00006753 NA coding upstream 1197876 18317693 ~ 18339457 (+)
AMCG00006750 NA coding upstream 1572562 17963401 ~ 17964771 (+)
AMCG00006751 NA coding upstream 1595109 17938902 ~ 17942224 (+)
AMCG00006748 NA coding upstream 1672675 17860132 ~ 17864658 (+)
AMCG00006772 grm3,LOC107090533 coding downstream 13437 19555403 ~ 19568758 (+)
AMCG00006770 LOC106594134 coding downstream 69353 19611319 ~ 19621286 (+)
AMCG00006771 NA coding downstream 94151 19636117 ~ 19642171 (+)
AMCG00006779 NA coding downstream 105164 19647130 ~ 19650694 (+)
AMCG00006778 fam107b,LOC102787157 coding downstream 155465 19697431 ~ 19706930 (+)
G112275 NA non-coding upstream 41568 19495534 ~ 19495765 (+)
G112259 NA non-coding upstream 141136 19395917 ~ 19396197 (+)
G112233 NA non-coding upstream 436935 19095628 ~ 19100398 (+)
G112207 NA non-coding upstream 633790 18900939 ~ 18903543 (+)
G112182 NA non-coding upstream 792116 18695159 ~ 18745217 (+)
G112295 NA non-coding downstream 84847 19626813 ~ 19628164 (+)
G112302 NA non-coding downstream 91273 19633239 ~ 19635224 (+)
G112305 NA non-coding downstream 101685 19643651 ~ 19645956 (+)
G112350 NA non-coding downstream 398527 19940493 ~ 19940975 (+)
G112380 NA non-coding downstream 441039 19983005 ~ 19983296 (+)
AMCG00006672 NA other upstream 5597858 13933666 ~ 13939475 (+)
G111197 NA other upstream 6493885 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 6885518 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 7214055 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 9969057 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 1395531 20937497 ~ 20944977 (+)
G112567 NA other downstream 1506370 21048336 ~ 21049038 (+)
G112600 NA other downstream 1600899 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 1723287 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 2075666 21617632 ~ 21622508 (+)

Expression


Co-expression Network