AMCG00006775


Basic Information

Item Value
gene id AMCG00006775
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 19403281 ~ 19407976 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006775
AGTAGGCTGGAATATGCTGACAGGAATGACAGGTTAACCTTCAACAGTCAAATTGTCGGGCCCTATGTACACCCACCCGACGCGCAAAAAGCGCaccatttaaaacacacttgTGCAACCATGCCCCCCCGGGCCGACTCTCTGCTGAACTATGACAACCCGGTCCTGGTGACCAAGAGACCGGATAAGTCATCAAAGGACCAGCCTTTAAAACTGAGACCCCAGCAAATGCCGTGGACCATGCCACCACCTCCACAACCTCCCAAGACAGCTGCAGATGATGCCAACGAGGAGCAGACAAAACAGCTTCTCCACGCTATCCTGCCTCCCAGGCTATGGATAGAGGACAACAAGCTGTGGGTGCAGCAGGTTTCCACCATACCCTCCACTCGGATGGACGTGGTGCACCTTCAGGAGCAGCTGGACCGGAAGCTGGAGATGAAACAGGGCCGCAAGACGGGGATCTGCCCCATACGCAGGGATCTATACTCGCAGTGCTTCGATGAACTCATCAGACAGAACACCATCAGCTGTGCCGAGCGCGGGCTCCTGCTTCTGAGGGTACGCAATGAGATCATGATGACCATCGCCGCCTATCAGACGCTGTACGAGAGCAGTATTGCCTATGGCATGAGGAAGGCCCTCCAAGCCGAGCTGAGCAAATCCAACATGAAGACAAAGATGTCTGATTTGGAAAACGAGAAGAAAGACTTGGAGAGGCAGTTGAGAGAGCTGAAATCAGTGCATGCGGCCTATGAGGAAGACGAAGCCGCGAGATGGCAGgtggaggaaacaaaacactCGGATGCATTGAAGTCCGTGACACGAAGCAACCAGCAACTCAGGgctCAGCTGGAAAGCATTTTTGCAGCAAAGGTACCAATTTAATAGTATGTGcttttgtaatatgtaattaacatatcagaagcactgcccaagggcgAAGATCTGTAAGCGATCTCACTGTACTCGCGCTGATTGTCACTGACACGTGAACGCTCTGCTCGGgtcagcttgtgtgtgtggcacCCAGCGAAGATGGAGAAGTCATGCTCCAGCCCCCTCCACAGTAAACGGCCGCCTGCCTGAGCCTCCGAGGTGTGCGCAAAAACCTCCTTGGGCAGTCGTTGAATCTATCCAATCAAATTGCAAAGAAGAGGAATCCGCTTTCAACCAATCGTGCTTTACTGCCTCCGAGGAGCCGCCTTCAACTACCTTGCAGGTGTGAAAGTGCAAAGGCGGGAATTAGTTTTGAAGGAGGCGAGAAGTAAAGGCTAGAGCCTGTATAACACTAGTATACTGTacttaattcaatttttaaagcaatataaccatgtatgcatgtacatatatatttaataaattgaGCTGATTAATATATTcaacataaatgtaaatgtatatttaacgTGAGTTCATTACCTCAAGAACGTGTCCTGTATGAGCTGCCCAAGTCTTTCAATAAAGCGTTTCTGTCATTCCTGTCCTGTATACTGTAGCTTATATGTCAGTGATATTATGATGATATTAGTGCAAACAATTTCAGATCTAGTAGAGTCTAGTTTTACTTTCAGAGACAGGACTGACAGAAATGCTTTATTCACTGAGCTGGAGTAATCGTACAGTACCAGTACCTGGGGTAATGTACCCatgtatacttttttatttaacgACCTGGGGTATTCACAAACTCACTGCTGTAAGGATGAAgtcaagtattttttttggttttcatgtACTCTCGTACATCTTTGCAGTACTGAGTACTTGAGTATTGTACAAGTTGAAACAGTAGCCAGCTACACTAGAAGTAGTGCTGCTAATAAGGACACAGATACACAGGgaaaatatacaccgatcagccataacattatgaccactgacaggtgaagtgaataacact

Function

GO: NA

KEGG:

id description
K10410 DNALI; dynein light intermediate chain, axonemal

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006775 True 1903 mRNA 0.47 6 19403281 19407976

Neighbor

gene id symbol gene type direction distance location
AMCG00006768 NA coding downstream 66985 19307131 ~ 19336296 (-)
AMCG00006767 NA coding downstream 268554 19095536 ~ 19134727 (-)
AMCG00006765 NA coding downstream 357220 19006380 ~ 19046061 (-)
AMCG00006764 NA coding downstream 400500 19000927 ~ 19002781 (-)
AMCG00006763 NA coding downstream 440721 18939150 ~ 18962560 (-)
AMCG00006776 NA coding upstream 161758 19569734 ~ 19593231 (-)
AMCG00006777 LOC107743993 coding upstream 235642 19643618 ~ 19646890 (-)
AMCG00006780 NA coding upstream 271625 19679601 ~ 19781353 (-)
AMCG00006785 prpf18 coding upstream 533081 19941057 ~ 19947697 (-)
AMCG00006790 cpt1b,LOC100329197,LOC106573415 coding upstream 563651 19971627 ~ 19981435 (-)
G112205 NA non-coding downstream 517235 18883628 ~ 18886046 (-)
G112195 NA non-coding downstream 658064 18695072 ~ 18745217 (-)
G112140 NA non-coding downstream 994504 18399263 ~ 18408777 (-)
G112020 NA non-coding downstream 2075695 17108977 ~ 17327586 (-)
G112270 LOC100136012 non-coding upstream 843 19408819 ~ 19418420 (-)
G112287 NA non-coding upstream 106823 19514799 ~ 19515004 (-)
G112288 LOC108263977,LOC105018424 non-coding upstream 129229 19537205 ~ 19537793 (-)
G112289 grm3,LOC108263977,LOC108444204 non-coding upstream 133127 19541103 ~ 19541968 (-)
G112290 grm3,LOC107090533,LOC106924857 non-coding upstream 156980 19564956 ~ 19566015 (-)
AMCG00006754 NA other downstream 1036719 18339270 ~ 18366562 (-)
G112059 NA other downstream 1769836 17632891 ~ 17633445 (-)
AMCG00006719 NA other downstream 3506412 15881130 ~ 15896869 (-)
G111767 LOC107575789 other downstream 3650046 15752821 ~ 15753235 (-)
G111621 NA other downstream 4649311 14712017 ~ 14753970 (-)
AMCG00006773 tmem243b,tmem243 other upstream 215179 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 225117 19633093 ~ 19635925 (-)
G112420 NA other upstream 827880 20235856 ~ 20236206 (-)
AMCG00006807 NA other upstream 1239344 20647320 ~ 20653659 (-)
AMCG00006813 NA other upstream 1446081 20854057 ~ 20964562 (-)

Expression


Co-expression Network