AMCG00006776


Basic Information

Item Value
gene id AMCG00006776
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 19569734 ~ 19593231 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006776
ATGTGTCCTCTGATGGGCTCttttttactgtgtgttttgcagacAGACTACTATTTTGCGTACACAGAATGTGACAGCACTGGGTCCCGGTGGCGAGTGGCTATACCCAACAACGAGGGAAAGTGTTCGGGATTACCCGATCCAGTCAGCGGCACAGAATGCACCTTTTCATGCGAAGCCGGACAGTTCTTGGAAATGTCCTCCCAGCAGTGTATCGAGTGTGCTGCCGGGACGTACTCCCTGGGCAGTGGGATCCGCTTTGATGAGTGGGACGATATACCAGCTGGCTTTACCAGTATAGCCACATACATGGACAATGGCCCCGGTGGGGAGGAGTCTCTGACGTGTAACAACTCTACCTGGGATCCTCAGGGGAATTACTTGGAATCGAATCGAGACGAGTGCACTGTGTCCTTGATCTACGCAGTGCACCTGAAGAAGCAAGGTTCGGTGTCCTTTGAGTACCAGTATGTGGACAACAACATCTTCTTTGAGTTCTTTATTCAGAATGACCATTGTCAGGAAATGGAGACATTGGATCAAAAGTGGATTAAACTAACAAGCAATGGAGAGTGGGGCACTCATACAGTAAACCTGAATTCTGGCACCAACATCCTATACTGGAGGACCACTGGAATATTACTTGGTTCCAAAATTGTCAAACCGGTGCTTCTGAAGAATATTCAGATTGAAGGAGTTGCATATACGTCAGAATGCTTTCAATGCAAGCCTGGTACCTTCAGTAAAACGCCTGGTTCTTCGTCCTGTGACGTTTGTCCCAGAAACACCTACTCGGGCAAAGGTGCCAGTTCCTGTACTCCGTGTGATGAGGAGAAACAGTATGCGCCGGAGGGATCAGCAGAGTGTAAAGACAAGCCTGTTTGTACAGCAAAAGATTACTTTCAGATTCACACACCTTGCGACAGCGAGGGAAAAACACAGATCATATACAAGTGGATTGAGCCGAAAATCTGCATGGAGAATGTAACCAACGCGGTGACTCTGCCTCCGTCTGGAGAGAAGAAGCCATGCCCCCCCTGTAACCCTGGCTTCTACAACAATGACACGGCCACCTGCTCGCCCTGCCCACCTGGCACCTATTCTGATGGCATTAAAGCGTGTCAGAAGTGCCCTGCTGGCACCGAGCCAACGCTGGGGTACGAATACAAGTGGTGGAACGTTCTGCCCGGGAACATGAAAACCTCCTGCTTTAACGTGGGCAACTCGAAGTGCGATGGGATGAATGggTGGGAGGTGGCTGGTGACCATATCCGCAGTGGAGCGGGAGGCTCAGACAATGACTACCTCGTTTTAAACCTCCATGTTCCTGGATTTAAacTTCCAACTTCAGTAACTGGGACTACAGGCAGCGAATTTGGCCGCATTACCTTCGTTTTTGAGACCATCTGTTCAGCTGACTGTAAACTCTACTTCATGATGGATGTGAACAGGAAAAGCACCAACGTGGTCGAGTCTTGGGTAGGAACTAAGGGAAAGCAATCCTACACCCGCGTTATGCCGAAAAATGCCTCTGTGTCCTACACCTGGGCATTTCAGAGGATTAACCAGGCCCAGGAGATTCGGAGGTTTGTAAACGACGTCGTGAAGATCTACTCCATCACGGTGACCAACGCCCAGGACGGGGTGGCCTCTTCGTGCCACGCCTGCGCGCTGGTCTCTCAGCAGTCCGGATCTTCCTGCATCCCCTGTCCTGCGGGACACTACATCGACAAGGACACCAACCAGTGTAAAGAGTGCCCCCCTGACACGTACCTCTCCATGCACCAGATTTATGGCAAGGAGGCCTGCATCCCCTGTGGGCCGGGCAGCAAGAGCAATAAGgAACACACGGTCTGCTTCAGCGACTgcaccttcacacacacagtcgaGAACCAGACCCTGACGTATGATTTGAACCAGCTTAGCTCTGTGGGATCAATAATGAATGGGCCTAGCTTCACGTCCAAGGGAACTAAGTACTACCATTTCTTCAATATAAGCCTGTGTGGACATGAGGGGCAAAGGGTGGCTGTCTGTACTGACAACGTGACAGACCTGTCGGCGAAAGACCTACAGAGCGAATCCAACGATTTCGTCAACTATGTGGAATCCTTTATTTGCCAGTCAACCATCATACCTTCAGACGGTCACGGGTTCAGAACGGCACTATCCTCGCAGTCCATTAGCCTTGCAGACATTTTCCTGGGAGCAACTGTTGAATCCATTCTGAATGGCACCGTTGTCAAGCCAGATCTGTTCTCTGACCCTCCAAAGAAACTACCAGATGTCAATTTCTTCTATCGGTCTCCACAAGCTACCTCGTCATGTGACAAGGGTCGAAACACCATTATATCACTGAGGTGCAACCCTGAGAAGACTGTCAGAGGAGAGATTTCAGTTCCCAGCAAATGCCCTGCAGGGACTTGTGACGGCTGTACTTTTAACTTCTTGTGGGAAAGTGCCGACGCCTGCCCACTGTGCACAGATACGGATTATCATGAAATAGAAGGAGCCTGCAAGGGAGGCGTTCAGGACACCTTGTATGTGTGGAACGAGCCGAAGCATTGCACTAAAGGCGTCTCCCTCCCAGTAAAGAAAACTCTGCCTTGTGAAGCTATAGACTTCTGGTTAAAGGTTGGCGCTGGAATTGGTGCATTCACTGCAGTGCTGCTGATTTCCCTGACCTGTTACTTttggaagaagaacaaaaaGCTGGAATATAAATATTCAAGGCTAGTGATGACCGCTAATAAAGAGTGTGAGCTCCCCGCCGCGGATAGCTGTGCGATAATGGAGGGCGAGGACAATGAAGACGAGGTGGTTTATTCAAATAAGCCGTCCTTGCTGGGAAAGCTGAAGTCAATAGCCACAAAGGGAAATGGAGAGAGCTGTGAGTCTGTTCAACTCAAATCATCCAAGAATGAGAGATGGGTTTGGGGATAAAAAGAGGTTTGGTTCGAATTCAAATACGCATTGGGAGAAACAGAAAccgaaaaacaaaatgcacaagaCCACTGTTAACAATATTCTGGATGATTTGTGGACCAGGAACTCCGCCAATGAAGATATTCTAGTTTGGTTGCCTTATTACTGGGATAAAATACCTTGCCAAAGGGGATTCAGACACACTGATGATGCACTGGGTATAAGTTAAGCTCAGGAAGAGCCCTGgaaaagggcgtctgctaagaaatacataataaaagaGAGACACCTTTGATACATATTTCTTTTGTTTGGTATTTTGCATTCTGGTTGCTTTTCTCTGGCTGTTTATAGGTTTAAGTAGTACTGTTTCTGTACAAGAAAGTTCCCAATAGGTCTTTCCTATGTTTCGAAATTAGGTAATGCAAGATTTAAACCTTCCCATGTGTTCAATACGATGGGCAGGAGCCAGCAGCATGCAGAGTAACTGTGCTCAGCAGACTGAAATCCCTCCATACCTCATCAGAGCGCCTACTTTATTTGAGTTGTTCATCTCATCATGCAGGTTCTGTGCAAGGAGACGTGAGGAGACTTGGAGGTCTGTTGTGAAATAGTCATGTTCATCTTGTGATAATGAATGGGGAAGAAAAACATGGAGAGTTTAAAGCCTTCttagctgtgtttttgttttgttatgtatgtattccttTTGACAATTCTGctccttttatgtttttgaacTGTGTTTTCCTCATATCAAATTATTGGTACTTGTAAATCTCACATTGCATATTGTGGAGTGATTTGCATAGATTCATTGgtattttgtaatcattttatcAGAGAGAGAacctatttattttgcacttttaattgACAGCGATCCTTCACCACATCTGAGTTTGTCATAGATATTTCCAGTCATATCATGTATTTGAATAGTCAACAGTGTGACATCTgtgggaaaaacaaagcaaactatTGAAATTGAATAAGAAGGCATCAGCTGCACAGATAAATACCATTTTCTTCTGCAATCTGTTGTTCAActctgcatatttattttgtttaactaggtgtttttgttgaaagtatatatattaaaacatactgTTCCTCAggtctttggtttgtttttgattttaacCAGCATTTGTGCAAGGGTTGTACATAAGttcacacagaaacattttaatgaccGTCCTCAGTTTAATACGTATTGAGCCATTCATGATAGTGTCAACAGCAGTAAAAGgcacaaaaacattaataaaacgGCTCCTAGTCCCATATACCTTTTATACCGTTCCTCAAATCCCATGCATAAGCAGTGAACATAAGACAATGAAAGGGAAGGAAAAGACACCAGAAATGTatgtttggggggtgggggtatggggcagaaataaatcatgttGTTCTCCACTAATGTAGACTGATCTATTCtcagaataaaatattgtcaactgtttttggtttgttagttATTTGTTTGGACCCCAGAGCAAGACTTTGTCCTCGGTATTTGATAACCTTGAATTCTGATTGAATAAAATCTggtaatataatgtattcagatttcattgattgtaattattattattcatatttttttaattcacagtaATATTCTTTTTAATGAAGGATTTTACATGAATTCAATAAAACGTACTGGTATTTGGTTTTCTGAAATCCATTTTGGAATGGACAGCTTAACCAGCCCCTGAGAGTAAAAGCAAAACTACAAAGAGAGTACTGctgaaatttattttaaagctgcaaGAACTCCACTGACAACAAAAATCACTGgaatatgttcattttacccagaATGCAATGCTATAAAAATCCTTCAGTTAGAAGACACTTAGTTTGACCTGTCCTCGTAAAAGTGGCTGGTAAAGGGGCACATTTTAAACTCAAGGTTTGCTTTATTATTGCAGAGAATTGTATTCCTTTACAGTCTTTCCTCAcatcttttttaaattgccGTGGTTCTATTAAATGATGTATACATTTGCGCATCAGCTTTTATTTGTCTATCTAAATCATCAATTGCAAcagatttaaaattgaaataacttGGAAACGTAAGCTTTCCATATTTTAAGGAATATTACAGTTGAGGCTTGTGAACAGTTGGTAGTAAACacttacatttcattattattttaaggtatAGCTGAAGACACAATCCaataacatatatacattattaatgtaagCCTAGAAGAACATCTGCTACACTCAagctatgttttatttaagaagAGTAAAAACAAACCCAGCAGTGAAGACAGAAAAAGCCCGCTGGACCTCAGGTTTAATTAAAGTCATGTCAGGCTTAGTTGGGCAGTAGAGAGGCCCTAAGATTTGCCGTTCAACATGAAAGTTTGCCATTCGCCAAGGGATAGTTACTAACTCACTGACTGTAAGTGTATTTTTCTCCGAATACAAAAGGAATTCTAAAGTTATTGGAAACTGCACTCGCTCTGCTGCTTTATTATGATGCAGCATGTGTTCAGTATGCTAATGAAGGATTAACAGTATCTTGTAAAGAACAAGGTGCATGTAAATCACATTTGGGTTTCCACTAGACactaaagtaaaacaaaggGGAAAATCAAAAAGACAACGCATGGGAAGGATCCACAAATAAAAGTGCACATTGTCTCTTGAGATACATTCTTAGAAGATGAAGAATGCGTGTTAATGCAGGGGACGGAGATGTGAAGGAACAGCAGGATAATTGGTGTCGGTTTTTACGTTTGGAACAGATTGTCCCCCTCAGGACACATTTCTTAGGTCAGCTGAGCATTTCTCTGCAACAGGAGACATCTGTTCCTTGGTGCCAGGGCCGATCTCCCTCGCAGGTCGTCTTCGGTGGTGCTGCAGAATCCTTTAAAGTAGATTTGGGTAATATTGGCCATGTTTACAATAGAATTAGCGCCTTGGCTTGCTTGTTCATTTGTCTTCACTTGGCCCAGCACTAAACACAAATGAATCTTGGGGGGAGGGAGTAAGGAACTTGGCCACAATCTGATTGGCCACAGGCAGCGCAGGCTTTGACTGTTAATTGTGGGTATAATGTAATGCCGGAGAATATGGCAGATTTGGAGCTTGTGAAACACGGAGCACCTGCCTTTACAAACTGCAATCCGATTTCTCCAGTTAATCTGATTTTGGAAACATTCTATAAACAAGGACTGCACAAGCGCCTCTCCTGCACCGATACTGAGAGGGTACACTGAATAATGTGGTGGCACATGTGGCCACAAAACACAAGGCTCTCTAACTGTCATCTAATGTAGAAGTGTCATATATCAACTGGAGAAACACTTTATGAGGTTGCCTTGGCTCAGGAATAATGTTTTGGGCTTTTGTGTGCCATACATATCATGGAGATTATATAGTGTAGGATAGTGGGACTATGAGTGACTGCTTTGGTTTATTTCCTTGAATTTGGCTATTTTGAGAATGGCCAGCTTGAAAGCCAACCCTTTTTTTGATGCTCTATCCCTCAATTTCGGAAGCCAGGGACTCCAATCATAGTCTGTCTGCAACAACTCGGCATGTGGAACGTATCCTCGGGGAGCGAGGAATGCACGAGCAGATAAGCCAcacaacaaaggaaaataatcttTCAGATGTGCTagcataaataaaatgcatgactaGGGGCATAAGATTACTTTACATAATCCGCCGCTTCCTGTTGTATTTTGGACACAAGGgtttctctgtattttattttgttcaaccACAGGAACTGGTGTGCAATTCAGATATTGCTCtgggatttagttttttctgcattttgcattctattctacatttttcacatttcccaAGACAGTGTTTTAAATGACCCCTGTTTTATTGCATGGCTGCACTCGAAGGCAAGACAAAGAGCGATGTTTGCAGATGTGCGAGTACCAATGCTCACgcttgtgtgtattttgtaggGTCGTATACATTTAAAGCTAAGTTGTACAAGTTCATGTTAAACCAATTTATAATGGTTCTTTCTTGTTGTCATGATTCTTTAATAAATGCGAACGGCTTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006776 True 6992 mRNA 0.43 21 19569734 19593231

Neighbor

gene id symbol gene type direction distance location
AMCG00006775 NA coding downstream 161758 19403281 ~ 19407976 (-)
AMCG00006768 NA coding downstream 233438 19307131 ~ 19336296 (-)
AMCG00006767 NA coding downstream 435007 19095536 ~ 19134727 (-)
AMCG00006765 NA coding downstream 523673 19006380 ~ 19046061 (-)
AMCG00006764 NA coding downstream 566953 19000927 ~ 19002781 (-)
AMCG00006777 LOC107743993 coding upstream 50387 19643618 ~ 19646890 (-)
AMCG00006780 NA coding upstream 86370 19679601 ~ 19781353 (-)
AMCG00006785 prpf18 coding upstream 347826 19941057 ~ 19947697 (-)
AMCG00006790 cpt1b,LOC100329197,LOC106573415 coding upstream 378396 19971627 ~ 19981435 (-)
AMCG00006788 NA coding upstream 388935 19982166 ~ 19984437 (-)
G112292 NA non-coding downstream 62 19568517 ~ 19569672 (-)
G112290 grm3,LOC107090533,LOC106924857 non-coding downstream 3719 19564956 ~ 19566015 (-)
G112289 grm3,LOC108263977,LOC108444204 non-coding downstream 27766 19541103 ~ 19541968 (-)
G112288 LOC108263977,LOC105018424 non-coding downstream 31941 19537205 ~ 19537793 (-)
G112287 NA non-coding downstream 54730 19514799 ~ 19515004 (-)
G112410 NA non-coding upstream 485660 20078891 ~ 20079411 (-)
G112496 NA non-coding upstream 1120852 20714083 ~ 20756786 (-)
G112557 NA non-coding upstream 1404035 20997266 ~ 20997529 (-)
G112562 NA non-coding upstream 1422142 21015373 ~ 21016048 (-)
G112563 NA non-coding upstream 1423970 21017201 ~ 21017740 (-)
AMCG00006754 NA other downstream 1203172 18339270 ~ 18366562 (-)
G112059 NA other downstream 1936289 17632891 ~ 17633445 (-)
AMCG00006719 NA other downstream 3672865 15881130 ~ 15896869 (-)
G111767 LOC107575789 other downstream 3816499 15752821 ~ 15753235 (-)
G111621 NA other downstream 4815764 14712017 ~ 14753970 (-)
AMCG00006773 tmem243b,tmem243 other upstream 29924 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 39862 19633093 ~ 19635925 (-)
G112420 NA other upstream 642625 20235856 ~ 20236206 (-)
AMCG00006807 NA other upstream 1054089 20647320 ~ 20653659 (-)
AMCG00006813 NA other upstream 1260826 20854057 ~ 20964562 (-)

Expression


Co-expression Network