AMCG00006779


Basic Information

Item Value
gene id AMCG00006779
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 19647130 ~ 19650694 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006779
CGCGCTTTAAGTTGCACAACCAGAGAAGTTGGGCTAGTCCTGGGTTTAGGGTGTGGGGTAGGATTTCTGCTTGAGAAATTGagttttgttgctttttaacaACATCATGCAGTTTGCCAAGGTTTTTACAGCTATAGCATTTTTGTATATTGATATTGATGTTGCCAGTGCAGGCGATTGTGAAGTATGTATTGGATTCCTGGAGAGGTTTTACCAGACCTTGAATTTAAAGTACACAGAATTGACACCAGCCAAGGTGGAACAAGATTTGATTGCAGCCTGCAAAGATGCCAAAGGGAAAGAAAACCGACTGtGTTACTACTTGGGAGCAACAATTGATGCAGCTACAAAGATGACAAGTGAAGTGACCCGTCCAATGAGTTCCCATGTGCCCGTACAGAAAATCTGTGAGAAGTTACAGAAAAAGGACAGTCAGATATGTGATCTGAGATACGAAAAGCAGCTGGACTTCAGCGTTGCCGGCTTGTCTAAGCTGAGGGTAGCAGAACTGAAGAACATTCTCAATTCCTGGGGAGAAGTGTGCAGAGCCTGCATTGAGAAAACAGACTTCGTGCACCTCATCCAAGAGCTTGCTCCAAAATACAGTAAACGCCAGGGACACAGCACAGACTTGTGATACACAAGTGAATAAAGGTTTTGCCTTAATAAACTCTCCAGACACTGGGTATAATTCTAATTTGAAATGGTCAAGTTTAAATGATCTctttgtaaaattataattctTAAATTGTGCTTAAACGGATAACAGCACTAAATGCTAAACATCTACAATGTTTTTACACTGAAGATGTAGCTATGTATAATACAAACGTTTTCTGGTGTTTCAGGTGTCAGAGTGCAATacatgtgattgtttttttctttttactccAGTGaactattttactattttatttgtcctctcttgaatacatgaatacataccTTGGCTTAAAtttggttaattaaataaacaccagGGGGAGCTCTAGTTACTTATCAGTGGAAAATATTACCGGTGACAGAACTTTTCTTTGGTGAGCATTTTGGCCATTCTTCTGGTAGGAGATAAAAGCGAGCCAGAAAACTGTCTGCAGCCTGTCAGTGTAGCTCTCACTGAAAATGGGATGTATATCTGTTCAACTGTTATCCTGTGGCTTCTTTTTTTACAGTGCCATATAGACTGCAATCATTTTAGCCTCTGGCACTATGCATACAAAATCAACCTCTACTGAATTTATATGAGAAATGAat

Function

GO: NA

KEGG:

id description
ko03050 Proteasome

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006779 True 1254 mRNA 0.39 4 19647130 19650694

Neighbor

gene id symbol gene type direction distance location
AMCG00006771 NA coding upstream 4959 19636117 ~ 19642171 (+)
AMCG00006770 LOC106594134 coding upstream 25844 19611319 ~ 19621286 (+)
AMCG00006772 grm3,LOC107090533 coding upstream 78372 19555403 ~ 19568758 (+)
AMCG00006769 LOC108263977,LOC108444204,LOC107665551,LOC107559415 coding upstream 105164 19537333 ~ 19541966 (+)
AMCG00006752 LOC107577127 coding upstream 1246939 18368664 ~ 18400191 (+)
AMCG00006778 fam107b,LOC102787157 coding downstream 46737 19697431 ~ 19706930 (+)
AMCG00006783 NA coding downstream 221312 19872006 ~ 19874589 (+)
AMCG00006781 NA coding downstream 234028 19884722 ~ 19933196 (+)
AMCG00006784 NA coding downstream 298447 19949141 ~ 19955839 (+)
AMCG00006782 sephs1,LOC106573416 coding downstream 315335 19966029 ~ 19971398 (+)
G112305 NA non-coding upstream 1174 19643651 ~ 19645956 (+)
G112302 NA non-coding upstream 11906 19633239 ~ 19635224 (+)
G112295 NA non-coding upstream 18966 19626813 ~ 19628164 (+)
G112275 NA non-coding upstream 151365 19495534 ~ 19495765 (+)
G112259 NA non-coding upstream 250933 19395917 ~ 19396197 (+)
G112350 NA non-coding downstream 289799 19940493 ~ 19940975 (+)
G112380 NA non-coding downstream 332311 19983005 ~ 19983296 (+)
G112424 NA non-coding downstream 625299 20275993 ~ 20276232 (+)
G112430 NA non-coding downstream 887249 20537943 ~ 20538220 (+)
G112435 NA non-coding downstream 912363 20563057 ~ 20563275 (+)
AMCG00006672 NA other upstream 5707655 13933666 ~ 13939475 (+)
G111197 NA other upstream 6603682 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 6995315 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 7323852 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 10078854 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 1286803 20937497 ~ 20944977 (+)
G112567 NA other downstream 1397642 21048336 ~ 21049038 (+)
G112600 NA other downstream 1492171 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 1614559 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 1966938 21617632 ~ 21622508 (+)

Expression


Co-expression Network