Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006780 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 19679601 ~ 19781353 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006780 | True | 585 | mRNA | 0.47 | 6 | 19679601 | 19781353 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006777 | LOC107743993 | coding | downstream | 32711 | 19643618 ~ 19646890 (-) |
| AMCG00006776 | NA | coding | downstream | 86370 | 19569734 ~ 19593231 (-) |
| AMCG00006775 | NA | coding | downstream | 271625 | 19403281 ~ 19407976 (-) |
| AMCG00006768 | NA | coding | downstream | 343305 | 19307131 ~ 19336296 (-) |
| AMCG00006767 | NA | coding | downstream | 544874 | 19095536 ~ 19134727 (-) |
| AMCG00006785 | prpf18 | coding | upstream | 159704 | 19941057 ~ 19947697 (-) |
| AMCG00006790 | cpt1b,LOC100329197,LOC106573415 | coding | upstream | 190274 | 19971627 ~ 19981435 (-) |
| AMCG00006788 | NA | coding | upstream | 200813 | 19982166 ~ 19984437 (-) |
| AMCG00006789 | NA | coding | upstream | 205394 | 19986747 ~ 19999501 (-) |
| AMCG00006795 | LOC102794702 | coding | upstream | 266588 | 20047941 ~ 20053808 (-) |
| G112292 | NA | non-coding | downstream | 109929 | 19568517 ~ 19569672 (-) |
| G112290 | grm3,LOC107090533,LOC106924857 | non-coding | downstream | 113586 | 19564956 ~ 19566015 (-) |
| G112289 | grm3,LOC108263977,LOC108444204 | non-coding | downstream | 137633 | 19541103 ~ 19541968 (-) |
| G112288 | LOC108263977,LOC105018424 | non-coding | downstream | 141808 | 19537205 ~ 19537793 (-) |
| G112287 | NA | non-coding | downstream | 164597 | 19514799 ~ 19515004 (-) |
| G112410 | NA | non-coding | upstream | 297538 | 20078891 ~ 20079411 (-) |
| G112496 | NA | non-coding | upstream | 932730 | 20714083 ~ 20756786 (-) |
| G112557 | NA | non-coding | upstream | 1215913 | 20997266 ~ 20997529 (-) |
| G112562 | NA | non-coding | upstream | 1234020 | 21015373 ~ 21016048 (-) |
| G112563 | NA | non-coding | upstream | 1235848 | 21017201 ~ 21017740 (-) |
| AMCG00006774 | meig1,LOC107581293,LOC107744135,LOC107592215 | other | downstream | 43676 | 19633093 ~ 19635925 (-) |
| AMCG00006773 | tmem243b,tmem243 | other | downstream | 47706 | 19623155 ~ 19631895 (-) |
| AMCG00006754 | NA | other | downstream | 1313039 | 18339270 ~ 18366562 (-) |
| G112059 | NA | other | downstream | 2046156 | 17632891 ~ 17633445 (-) |
| AMCG00006719 | NA | other | downstream | 3782732 | 15881130 ~ 15896869 (-) |
| G112420 | NA | other | upstream | 454503 | 20235856 ~ 20236206 (-) |
| AMCG00006807 | NA | other | upstream | 865967 | 20647320 ~ 20653659 (-) |
| AMCG00006813 | NA | other | upstream | 1072704 | 20854057 ~ 20964562 (-) |
| AMCG00006841 | NA | other | upstream | 2349142 | 22130495 ~ 22197664 (-) |
| AMCG00006854 | NA | other | upstream | 3171823 | 22953176 ~ 22958306 (-) |
