AMCG00006784


Basic Information

Item Value
gene id AMCG00006784
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 19949141 ~ 19955839 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006784
ATGTACTACACGCAGGAGTCCTGCTTTACATTGCATTCCTTGGGCTTTATTGCACAGCCTTCAAACATGGagttttctgaaaggaaaaGGAGCAGGAAATCGCAAAGCTTCAAATTGGTTAACGAAGAAGATTATGAGGCAGAGTACTTTGGTTGTAATAACACCACAGACATCAATGGGGAACTAAAAGATGCAACAATGGCTGAAGCCTGGCTGGGTGATGAAGGCATGGAGATTAAAAAGCAGATCACGGGCATGATGAGGCTCTTGAATGACAAGGCCGGCCGGGTGTACCAGAGAGTGGGGAAGGAGGGCGAGAACCTGAAACAGGAGCCCCAGGAGGTGGACCTGAGGTGGGCCCAGGCTGCGTGCGCTGCCGTGCCTTCTCCCTCTGCCAGCCAGGAGGACCCCCAGCACAGCACCTGGAACCAAGAACCTGCAGCCAGACCTCAGGTGTCTGGGCAGTATGGAACCCGATCCAAGactttgaaaatgattaataaaacaaagaacacagtcaaaacaaatgGAACTGTGGAAAAGCAGCGGGCCCAGAGCAGTGTCAGTGCCACACGTTCCTCTGCCCCCCGAAAGAGGACCCGGAAACGGAGGCCCGTCCACAAAGTCAGCGCTCCGGCCGTGAGCAACAGAAAGCCCGGCAGCCAGCCCTGCAGCACGCCAGAGCCCAgcgggaggagagagagagcagccaggGACAGATCAGTCCTGCCCCAGCCAGCTTCAGCTGTGGCCACAGAAAACCACGTCCCTCAATATGGGCTTATCAGAGAAATGCCTTCCTCAGAACCTGAAGTCCAACTGGCAGAGGACTATGATGTCTACATACCAAAATCCCAGCTGGACTCCATCCTTGTGAATTACACTCGCTCTGGAAGCTTGCTGTTCAGGAAGCTGGTGTGTGCCTTCTTCGATGACACGACACTAGCAAACTCCCTCCCCAATGGCAAGAGGAAGAGGGGTCTGAATGACAACAGGAAGGGACTGGATCAGAACATAGTGGGAGCTATTAAAGAGAAGTATTGCACTGCGAACAGAATTGAAAAGCTCCCTGGACCAAGAGATTGGGTACAAATTCTTCAGGATCAGATTAAACTGGCCAGGAGACGGTTAAAAAGAGGCAATGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006784 True 1146 mRNA 0.52 6 19949141 19955839

Neighbor

gene id symbol gene type direction distance location
AMCG00006781 NA coding upstream 15945 19884722 ~ 19933196 (+)
AMCG00006783 NA coding upstream 74552 19872006 ~ 19874589 (+)
AMCG00006778 fam107b,LOC102787157 coding upstream 242211 19697431 ~ 19706930 (+)
AMCG00006779 NA coding upstream 298447 19647130 ~ 19650694 (+)
AMCG00006771 NA coding upstream 306970 19636117 ~ 19642171 (+)
AMCG00006782 sephs1,LOC106573416 coding downstream 10190 19966029 ~ 19971398 (+)
AMCG00006786 NA coding downstream 40685 19996524 ~ 19999748 (+)
AMCG00006787 NA coding downstream 60106 20015945 ~ 20047024 (+)
AMCG00006791 NA coding downstream 306461 20262300 ~ 20262799 (+)
AMCG00006792 shank3a,LOC107710388 coding downstream 388562 20344401 ~ 20355364 (+)
G112350 NA non-coding upstream 8166 19940493 ~ 19940975 (+)
G112305 NA non-coding upstream 303185 19643651 ~ 19645956 (+)
G112302 NA non-coding upstream 313917 19633239 ~ 19635224 (+)
G112295 NA non-coding upstream 320977 19626813 ~ 19628164 (+)
G112275 NA non-coding upstream 453376 19495534 ~ 19495765 (+)
G112380 NA non-coding downstream 27166 19983005 ~ 19983296 (+)
G112424 NA non-coding downstream 320154 20275993 ~ 20276232 (+)
G112430 NA non-coding downstream 582104 20537943 ~ 20538220 (+)
G112435 NA non-coding downstream 607218 20563057 ~ 20563275 (+)
G112436 NA non-coding downstream 607659 20563498 ~ 20563788 (+)
AMCG00006672 NA other upstream 6009666 13933666 ~ 13939475 (+)
G111197 NA other upstream 6905693 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 7297326 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 7625863 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 10380865 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 981658 20937497 ~ 20944977 (+)
G112567 NA other downstream 1092497 21048336 ~ 21049038 (+)
G112600 NA other downstream 1187026 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 1309414 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 1661793 21617632 ~ 21622508 (+)

Expression


Co-expression Network