AMCG00006788


Basic Information

Item Value
gene id AMCG00006788
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 19982166 ~ 19984437 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006788
GTGGATCTGGGAAAACTGTCAGACTGCAGTGAGTACTTTAGAGCCCTGTCTCAGTCCAGAATGAAAGAAACCGCGGAGAACCTCATTCACCTTGAACACATTCCCTCTGGAATATTCCGCAATCTTCTGGAGTTCACTTTCCTGCAGCACTTTGAGGTAGCAGAGGAAGAACTTCAGGATCACATCGAAGTGGGCAGCTACCTCCTAGCACGACCCTTTGTGGCCAAGTGCCTGGGTTCCCTCAGCTTGGTCTTAAACCCTCAGAACTGCCAGACCTACCTGGACTTCTCTAAGACCATCTGCTGTGCCGAGATGCTCGACACAGTACACTGCTACCTGAGTGCACACTTGTTTGAACTGCCGCATCTGACCAGGAGCCTGGAGGCGACCGAGAGAGAACTGATTGTCAACCTCAGGTCAAAGGGTGTCTATCGGCTGTGTactttgaaaaaggaaaatctgaCGTCGGGAAACGATTCTCAAACGGAAGCGGCGCGCTACCTGTACAGTTTTGTGGGCTCTGAACACAGCGGGAGTTGGTGCAGAGTGACTAAATTCCCTTTCATGGCTGAAAAGTGGAGCTTTACCACTGCGGTGCTACACAACTACTTGTTTGTCATAGGCGGGTACAGACACAAAGTGAAGAGGGGCTTTGAATTCCGGATGGCGTCTTTCCGCTACAACCCCTTCACAGATAGATGGATCTCCGTTGCCCGTTTAATTAAGCACAGACGTCACTTCAGCACAGCAGTGTGTGGGGGGTACATCTACGCAGTGGGCGGCTGGTACCTGGACACCCTGGTGGCTCCCGACTCCAGCACTGCCCTGTACACTGCAGTGGAGCGCTACAACCCCTGGACCGACTCCTGGGCCTTCGTCTCTTCTCTGCCCCTCACCGATTACCACTTCACCATGTCCCTGTCACACGACATCCCGCTCGCCTCGGCCCTGCACGACTGTGTCTACGTCATCGGCACCATCCAAAGGACCAGAGAGAAGCTCATTTTGCAATACAATGTGAAACAGGATTCCTGGACAGAGCTGCTCCCCACCCTGACACGGGCGGACGCCGAGATCCCCAGTCTTTACTTCCTGGGAGCAACGGACAAGCTGCACTTGATCGGAGGGAATAACTTCCATAATGTCGTGACCTCATTCTGCGTGGAATCTCGGACGTGGGGCGAGTTCCACGCCACGGAGAAGATGGCCCTCGCTGGACAGGGCACTGTCTATGATAAGGAGCTTTACATGCCCGCAGTGGAACATAACTCAGTGATGAAGCTGAGCCTCCAAGATCACTCCATCTCCTTGTTCCCTCTTCTCCCCATCGCCTCCTCCTACGAGGCACTTTTCCATCTCGTTTTCCCAGAAGTGTCTGAAGAAGAATCAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006788 True 1392 mRNA 0.53 3 19982166 19984437

Neighbor

gene id symbol gene type direction distance location
AMCG00006790 cpt1b,LOC100329197,LOC106573415 coding downstream 731 19971627 ~ 19981435 (-)
AMCG00006785 prpf18 coding downstream 34469 19941057 ~ 19947697 (-)
AMCG00006780 NA coding downstream 200813 19679601 ~ 19781353 (-)
AMCG00006777 LOC107743993 coding downstream 335276 19643618 ~ 19646890 (-)
AMCG00006776 NA coding downstream 388935 19569734 ~ 19593231 (-)
AMCG00006789 NA coding upstream 2310 19986747 ~ 19999501 (-)
AMCG00006795 LOC102794702 coding upstream 63504 20047941 ~ 20053808 (-)
AMCG00006796 rabl2b,rabl2a,LOC107662875,LOC107600941 coding upstream 590360 20574797 ~ 20578476 (-)
AMCG00006799 odf3b coding upstream 627933 20612370 ~ 20617950 (-)
AMCG00006800 NA coding upstream 643095 20627532 ~ 20637604 (-)
G112292 NA non-coding downstream 412494 19568517 ~ 19569672 (-)
G112290 grm3,LOC107090533,LOC106924857 non-coding downstream 416151 19564956 ~ 19566015 (-)
G112289 grm3,LOC108263977,LOC108444204 non-coding downstream 440198 19541103 ~ 19541968 (-)
G112288 LOC108263977,LOC105018424 non-coding downstream 444373 19537205 ~ 19537793 (-)
G112287 NA non-coding downstream 467162 19514799 ~ 19515004 (-)
G112410 NA non-coding upstream 94454 20078891 ~ 20079411 (-)
G112496 NA non-coding upstream 729646 20714083 ~ 20756786 (-)
G112557 NA non-coding upstream 1012829 20997266 ~ 20997529 (-)
G112562 NA non-coding upstream 1030936 21015373 ~ 21016048 (-)
G112563 NA non-coding upstream 1032764 21017201 ~ 21017740 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other downstream 346241 19633093 ~ 19635925 (-)
AMCG00006773 tmem243b,tmem243 other downstream 350271 19623155 ~ 19631895 (-)
AMCG00006754 NA other downstream 1615604 18339270 ~ 18366562 (-)
G112059 NA other downstream 2348721 17632891 ~ 17633445 (-)
AMCG00006719 NA other downstream 4085297 15881130 ~ 15896869 (-)
G112420 NA other upstream 251419 20235856 ~ 20236206 (-)
AMCG00006807 NA other upstream 662883 20647320 ~ 20653659 (-)
AMCG00006813 NA other upstream 869620 20854057 ~ 20964562 (-)
AMCG00006841 NA other upstream 2146058 22130495 ~ 22197664 (-)
AMCG00006854 NA other upstream 2968739 22953176 ~ 22958306 (-)

Expression


Co-expression Network