AMCG00006789


Basic Information

Item Value
gene id AMCG00006789
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 19986747 ~ 19999501 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006789
GGATTCTATATTTTGGCTTTCAACCCTACATGTAAATGTCCTCTTTTGGGGCCGTTTACTTTTCTCTCAGATGCACCCAACTGGATATCCTAAGGTTCGTCCATGGTCTGAGTTATTGAACTCAATGGAAAGACATACATTTCACATCATTAGATTCACTAGTAAGAAGAGTTCCAGAGTCAGGGATCCATTTAAAGAGGAAATCAAAAAGATGTTTCCATCaatttattaacaacaacacagaagataatgtaattatgtactgtacatgtaatGTGACCTAACTTGTGTTCATATTCAGAATTTTTTATCCGCTAGTAAAAGATCCATATAAGCTCCAACAAGAAGGTCCTCCTTTTTCACGCCCAGCTCTTCCATTAATTTGTGAGTGATGTCTTCACCTTCCTCTGCACTCTGACCATCTTTAAGCACCACCTGCAGTTCCATGAAGTGACCCAGGCCCTCAACTGTGTCCACATGGACCCTGGTCTGTCCAACCATGTACAGGTGTCGCTCTTTTTTCACTGTTCCCTTGACCCCCAAGGAAGCAGAAAGAACTTCCtgCAAGTCCATCTGGATCATTCGTGAGAGAGATGGAGTAATTTGAGAGCTTTGGTCCGTCCACATCTGGCCTGTCATAGAATATTAACTGGCCACTCCCATTCATTAAATTCCTAAGCTTCAGACGACCCTTTTGCACATTAAAAAAGGTGTCTTGTTGCAAAATGATTGTTCCTTCCGATTGGCTGAGCTGTTTGGCCTTCCGAGTCAGAATCTGAATGTCGTGAACCGCAGCTTTGATCTCCACATTGGACGGCATTCCTGCAACAGTTAAGTCCCGCTACTCCTATAGCAGGCGCCTCTGCTCCCCTGCACAACGACAACATCCGCCGTACACAACACATGGGCAGCGCGCCATGCCGTACTTACATCTCCTCCCCCAGGCAAATGCAGTGTTTAAATACGCCATTTGGGGACGCAATCAGATAACTACACATAAAgccattttactttaaatatagaCTGTATTATAAAGCTTATTTCTGTGAAGATGCAATCGTGTCTGACTCTCCTGCATTACGATGATTACGAAGAACACATCTgaccggtgtgtgtgtgtggctggtTTGAGCTTTGGCGCTGATAACAAATTGAAATTTTAATAAATGAGAATAGTTATGAAGATCGTGAGTCATGTTTTAACCTGTACTGTGATGGATTTGGGATGTAGCGAAAGGTGCGCCACATGATACAGAGTTCCGGAGACGCCCACTTTCACAGAACCGTTTTGATGGCGGATCGGCCGCTTGTGCCTCCGCGCCTGCGCTGTGAGGCAGACGAGACGCTGCAGCGCTCAAGAGGGACGAGTTCAGCGCCATTAAACCACTGCCGCCCCCTAGCGCAGCGGAGGCGAACGACACTGCGCCGGGGAGAAAGGCGTGGCTCGGCGGCTGCGTGTGACGTCAGGGGAAGCGCCGCAGCTCGGAGGTCGGGATAAACGCGGATGCCGGGCGACAGCGCTGTGGGATCCGCAGCAACAGTGCCAGCAGGACGGGACGTGTGTCAAGCCATACCTTCATATTAAACACGACTGCAGTCTAGCTTTCAATGCATGTGGTCGTGTTTTTCATGGTCCGGTCCCTTCCCCACTGATGCTCCACACACTGGTCCGTGCTGGACACCGCGTTGGTAAATCTAGTTTCTCGCTGATTACTATCGATCCGTCTGCACCGAGGAGGTGCGTGAAAATAATGCAGTCGGGGGATCATCTGCACGGACGTCCTTGCGCGCTTTCCACGTCTAACGGGGTGAACGGGGCGTCGAAATCGCCGGGCGCGGATGCCAGGCTGCTCGGCCACCCCGGGGCTCCTGTGCGCTGTGAGCCGGGCAGGGTGCCCAGCCCCTGCTGCGGGAATGGGGAGGACGACTCGGAAGCGGAGTCTTACCGGGATGGGCGCACCGAGGAGGTGGATAAAGACACCAAGGTGAGGGCGTACGCCTGGTGCCAAGCCTTTCTGTCCGGAGCATGGAAACGCATTACCGAAGAAGAGTTTCAGATCGGCGTTATCAGTGGTGGACTCAGTAACCTACTGTACCTTTGCTCTCTGCCTGACCATGTGGACAGTGTTGGACAAGAGCCCCGCCAAGTGCTGCTTAGGATTTATGGAGCCATTTTACAGggtgtggATTCCCTCGTGCTGGAGAGCGTGATGTTCGCAATACTGGCCGAGCGAGAACTGGGCCCCCGACTCCATGGCATCTTCCCTGAGGGTCGACTGGAGCAGTACCTTCCGAGTAACCGGTTGCGAACGGAGCAGCTGCGCATTCCTGACATCTCTGCGGAGATCGCCGTGAAGATGTCTCGTTTCCACGGGATGCTCATGCCCTTTAACAAGGAGCCCAAGTGGCTGTTCGGGACCATTGAAAGGTACATGAACCAGATTTTGAAACTGAAGTTCACCAGAGAGGCCCATGTGAAAAAATTCAAGAAGCTGATGAAGTACAACCTGCCGGCAGAGATGGAGAGTCTCAGGACACTTCTAGAATCGACTCCTTCTCCTGTGGTTTTCTGTCACAATGACGTGCAAGAAGGCAACATTCTCATGTTGGATAATAGAGACCCCTCTTCTACAGACAAGCTGATGCTCATCGATTTTGAATACAGCAGCTATAATTACAGGGGTTTTGACATTGGGAATCATTTCTGTGAGTGGGTCTATGACTACACCCATAACCAGTGGCCCTTTTTCAAAGCCAATCTGGAAAACTTCCCCAACAAGCAACAACAGCTACACTTCATTCGACATTACTTGGCCGAGCACAATGGAAATGCTTCTCAGGAAGACCAGGCACAAACTGAAGAACATATAATCATCGAAGCCAACCGatTTGCGTTGGCATCTCACTTCTTGTGGGGATTGTGGTCCATTATACAAGCTAAATTATCGACGATAGAGTTTGGGTACATGGATTATGCGCAGTGTCGATTTGATGCGTACTTCAAGCAAAAAAAGCAATTTGAGTAACACTCAGTTTCAATGGAAACCTTCAGCACAAAACGAAAAATTAACGTATCATACAAAAAGGATCTCTCATTCTGTATTTCGAAGCTGCAGATTTGTTTCTCGGTATTTAAGCATCCGTCCAAAGATGATGAACAGTGAAAAATTcaaaaagtgcttgaatttatAAAGcttgagtttaaaaaaaaaaaaaattagcctatgttgaaaaataataaattacaacataaataataaaatgaacgAAAAGACTGTACTCTAAGACAAGTAACATCAATGACAGTTATTCACCAAGAAGTATGAGATGTACAATCATCAGTTGAAATCTTTCAAAATACTGTGATCTTGTAAATAGCATCTCAAACGTTATGTCTTCAGCTTATGACTGAAAAGAGGCAGGCAAGAgaaggaacattttatttttactacagTAAATAACTACATTTTGCGTCCTTCATATCATGTTAACAACAAAAGCACTTATGTACTTCATACAaatattcttgtttttgtttattgtattctgtattgtgTATAGTTTACATTTATGCGCATCATTTTCCTGTTTCTCATCCTTTTTCATTGCTGGTTATGGATACAATATTTCTTGCAGCTAGTACAGCATATACCACATTTCTGAATACCTCATGGAATGTATTGTGCGCTGTTTttgaacaaattaatttccaCATAGATTTCATATACAGTTCACAATAAGGGTCCAACATGTAATTCCATATTCTATATGGTTTTACTATTCTCTTTagagtttttttgtgtgtgtctgtttctgagctcaatatttagtattttttacaTATGCAGTTATCATAGGAATGTGACTTTAACTAGATTAACAGTGAGTGTTGTTTCAAACACACTGAATGTATAAGAACACCTGCAGCCTGTAGTTTCTTATGGAGAGGTTTCTATCAGCAATATATGTTGTTAAGGACAAGGAAAAAGTTCAACTCTTCTAGCTAATCTCTTGGTCAGGAAGAATCTTCAAATGTTCTCCCAGTATGGTTGTAAAATGGGCATTTgggcttttgttttaatgattttaatagtttttctttgatcaaatatttggtGTCTGATGTTAGCATGTATTTGTGACATCAAAATGCTGCTACTACAATACGGTGCATGTAAggatgatttaaaacaaattttatGACAAACGGATTTCTTTAATCACGTCCATGCGATGTCAGCATCAAAGTACACCCATGCCTTAAGCgacaatatattgtatacatttcttaaaacatgGCTGAGTTCTTGATGAactttctgtctgtctgactgtaaaagaaaattaattgcaATCCTCTTGAGcttattatttgttcatttgaaaCGGATATAATTGTATAGTTACTAAACAATGTAATTGGATCTGAATAGGATATGTCAGAAATACAATGGTGACTAAAAAGCTAAAAACGCAGAGAAAGGTTAACTCCAAGCAGTCGATAAACAAGCCAAGtaacttgttttttaaattagtttaattgaaatctaatttgtaattacaattaattaatattgtaattgtaCTACATTTTGGTTGTATGGGCACGTGGCTGAGACATTcaagaaacaaagtaaaactAATCACAAGAGGctgtgatttatgtatttatttatatgttttcacttttgtttttgactCTGTACATCACTTTCAAGGTTCAAATCATTTCTTTAAACTATAATGTTGTCATGTTATTGTTTCACCCAGTGATTTAGGTTTTTGTCAGCCTCACCAATTGAATCCATTGAATCCAAGCGACTATCCAATTGTGGTAAATAACTATgggtctaaatatatatattgttgtgtgtctgacctttggaaaatgttttttaaaaagatttgcATCCTAGAAAGTGAGTTTCCTGAGAAACATTTTGCAAGGATAAGGTAATGACAACTTAAGTTTTTACTAGGATTCAGCTCTAGTACTTTGCCCGGACTTTCTGGTTTTGGGTACAATTGTCCCTGTACTGGTCTGCTAAAGAACAGTAAATTCCCTGATTTCATCAAAAATCAtaacatttctgcttttttatgttGGTGATCATATTTCTATAGAAAGTGGTCATTCTATGGTAGATAGTTTCCAAACCTGCATCCCTCACATATTGCAAAGACAGGAAGAGAATCTGGGCatcacatttaaattagataATTTAAACTTATCTTTTCAATAAGTGCTGCCAGGCTGGGCACAGGACGCAAACCCCACTGTGTGCATATGGGCTGTCCACCACCGGCCCCTTCTGTTCCAGGAATGGGCTGTGCTCTTAGGGACAGGATTGCTGATCTCTACTACTTACAGGCTTTCCAATGCATTTGCCCATCAGTTTTCTTCTCTGCTATGCCATATTTATTGGGatagtgttattattaaattattaaattacttattttattccTCATTACTTAATGGAAACAATGCATACATTCCTGAATTAACCGCATAGTCCAAGAAAACAActgtttgaaatgcattcagATACTTGGTTTTACCAATTGAAAGCACATGCTTACAAAAACATCCACATTGAAACCTCAAAATGAAGATTTACTGACATGGCtactttttcttccttttctggATTTAAACCTATCAGCTTTACTAAAATTGTTGTTGCAAGACAAATACTATTTTCATCATATTGTATTCATCACCtgttcatattttgaaatcacAAATTCTATGAAGGATTTTTTTCCATAAAGATGCACTCATTGTAGTAATTGTATTAGGATTGGTCTGCAAGAGAAGGTATCCAGAGCCAACCGCAGGCATTCAAGTTTCAACAGCAACATTTCTTTACATCTGGAAAGGAAATACATAGACAATCACTAACTATTTAGTTTACAGACTTGTGTAAAGAcagattattttgtaattgcatGTTCAACTTCAGTCTTGACTTACAGAAATTAATCTGAATGCAACTGAAATATTCAATCAGTTTACTTTACTGTtcaggatttgtttgttttttgcactgCTACAC

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG:

id description
K14156 CHK; choline/ethanolamine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006789 True 6059 mRNA 0.41 15 19986747 19999501

Neighbor

gene id symbol gene type direction distance location
AMCG00006788 NA coding downstream 2310 19982166 ~ 19984437 (-)
AMCG00006790 cpt1b,LOC100329197,LOC106573415 coding downstream 5312 19971627 ~ 19981435 (-)
AMCG00006785 prpf18 coding downstream 39050 19941057 ~ 19947697 (-)
AMCG00006780 NA coding downstream 205394 19679601 ~ 19781353 (-)
AMCG00006777 LOC107743993 coding downstream 339857 19643618 ~ 19646890 (-)
AMCG00006795 LOC102794702 coding upstream 48440 20047941 ~ 20053808 (-)
AMCG00006796 rabl2b,rabl2a,LOC107662875,LOC107600941 coding upstream 575296 20574797 ~ 20578476 (-)
AMCG00006799 odf3b coding upstream 612869 20612370 ~ 20617950 (-)
AMCG00006800 NA coding upstream 628031 20627532 ~ 20637604 (-)
AMCG00006805 zgc:77650,arf5,LOC107559620,LOC107599973,LOC105888566,LOC107599983,LOC105912562 coding upstream 656752 20656253 ~ 20666945 (-)
G112292 NA non-coding downstream 417075 19568517 ~ 19569672 (-)
G112290 grm3,LOC107090533,LOC106924857 non-coding downstream 420732 19564956 ~ 19566015 (-)
G112289 grm3,LOC108263977,LOC108444204 non-coding downstream 444779 19541103 ~ 19541968 (-)
G112288 LOC108263977,LOC105018424 non-coding downstream 448954 19537205 ~ 19537793 (-)
G112287 NA non-coding downstream 471743 19514799 ~ 19515004 (-)
G112410 NA non-coding upstream 79390 20078891 ~ 20079411 (-)
G112496 NA non-coding upstream 714582 20714083 ~ 20756786 (-)
G112557 NA non-coding upstream 997765 20997266 ~ 20997529 (-)
G112562 NA non-coding upstream 1015872 21015373 ~ 21016048 (-)
G112563 NA non-coding upstream 1017700 21017201 ~ 21017740 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other downstream 350822 19633093 ~ 19635925 (-)
AMCG00006773 tmem243b,tmem243 other downstream 354852 19623155 ~ 19631895 (-)
AMCG00006754 NA other downstream 1620185 18339270 ~ 18366562 (-)
G112059 NA other downstream 2353302 17632891 ~ 17633445 (-)
AMCG00006719 NA other downstream 4089878 15881130 ~ 15896869 (-)
G112420 NA other upstream 236355 20235856 ~ 20236206 (-)
AMCG00006807 NA other upstream 647819 20647320 ~ 20653659 (-)
AMCG00006813 NA other upstream 854556 20854057 ~ 20964562 (-)
AMCG00006841 NA other upstream 2130994 22130495 ~ 22197664 (-)
AMCG00006854 NA other upstream 2953675 22953176 ~ 22958306 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location