AMCG00006804



Basic Information


Item Value
gene id AMCG00006804
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 20675866 ~ 20692613 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00006804
ATGACTGCGCAAGAGCCTGCGCCCCTGAGTAACAGCACGCTATCCTACACACAGGTCCGTCCGCTGTTCCAGCTCGCTTTGGCCGATTTCCTGGCAGCTGCAGTGCTCCTCTCTACTAGTGTAATCAATATTCTCCCAGGGGAGACCCTGTTTTTATCTTACAAGTTTTGTGAATACAGCATACCTCTGGCATATTGTTTTTACAGTATATCATTCCTGCTGGTTATGGTGTATTCTTATGAAGCTAAGGAAGCAGTGAGCGGCTGGAGGGAATCTTCAGAACCTGACGAACAGGACCCATTTTCGGCTATCCCAGGGCTGTTCATGGTTACCGTAGTGATTCCCTTGAGGAATTCACCTGCAGCAATAATCCCAGTTCAGGGATGGACAGACCTTAAACGTGAAAGTGTAGCCAGTGACAATGCGTTTTACTGCACCAGCTGCATTTTACTAATGCAGAAGAGTGATATCTGTCACAGTGTTGTATATTGCAAAGTGAAAAAGTGGTACCACAGACAACAAGAGGAGTGTTTATTCCTTGTGGAAGGAGACGGATTCAGCCGGAGACACCTCAGAGGGATGTATTGTACAGCGCGCTCCATTGTGCTCGTCgctcTGACCATGTCTCTTCAGGGTTTCTTCAACAGTATAGTTTACGGATGGTTACGCCGTAATTTCCGTGACGTTGCTCTTGGAGAGATCCGGGCTGGCTGGTCAGTGGCGATGGAGGACAGCCTGCAGGTCCTTGGGCAGGGAGCCGATGATGGTCTGTATGTAGAGCTCCAGCTGCTGAAGGACCTCGTCTTTGACCGGCAGCTGCTGCAGACGTGCTCGCACctgacaacacaaacacagcaaggGCCGGCCGGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00006804 True 870 mRNA 0.50 9 20675866 20692613

Neighbor


gene id symbol gene type direction distance location
AMCG00006801 NA coding upstream 1515 20667348 ~ 20674351 (+)
AMCG00006798 lamtor4,si:dkey-159a18.7,LOC107557308,LOC107590499,LOC107694163 coding upstream 28625 20645229 ~ 20647241 (+)
AMCG00006797 LOC104957567 coding upstream 47243 20620742 ~ 20628623 (+)
AMCG00006793 NA coding upstream 112990 20544477 ~ 20562876 (+)
AMCG00006794 NA coding upstream 140515 20531355 ~ 20535351 (+)
AMCG00006803 NA coding downstream 29190 20721803 ~ 20751442 (+)
AMCG00006802 NA coding downstream 67814 20760427 ~ 20767061 (+)
AMCG00006809 miox,LOC102303880 coding downstream 216101 20908714 ~ 20918410 (+)
AMCG00006815 NA coding downstream 395748 21088361 ~ 21102151 (+)
AMCG00006818 NA coding downstream 483935 21176548 ~ 21200739 (+)
G112465 NA non-coding upstream 36880 20638696 ~ 20638986 (+)
G112438 NA non-coding upstream 104439 20565526 ~ 20571427 (+)
G112436 NA non-coding upstream 112078 20563498 ~ 20563788 (+)
G112435 NA non-coding upstream 112591 20563057 ~ 20563275 (+)
G112430 NA non-coding upstream 137646 20537943 ~ 20538220 (+)
G112510 NA non-coding downstream 74923 20767536 ~ 20773066 (+)
G112535 NA non-coding downstream 226914 20919527 ~ 20923505 (+)
G112541 NA non-coding downstream 237621 20930234 ~ 20934218 (+)
G112564 NA non-coding downstream 330320 21022933 ~ 21023279 (+)
G112566 NA non-coding downstream 331666 21024279 ~ 21031984 (+)
AMCG00006672 NA other upstream 6736391 13933666 ~ 13939475 (+)
G111197 NA other upstream 7632418 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 8024051 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 8352588 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 11107590 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 244884 20937497 ~ 20944977 (+)
G112567 NA other downstream 355723 21048336 ~ 21049038 (+)
G112600 NA other downstream 450252 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 572640 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 925019 21617632 ~ 21622508 (+)

Expression



Co-expression Network