AMCG00006809 (miox,LOC102303880)


Basic Information

Item Value
gene id AMCG00006809
gene name miox,LOC102303880
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 20908714 ~ 20918410 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006809
CTCACTGCCATAGGTGCAACATGTGCCAGAGAGATTATCCTTTAAACCTGTCAATTATATATCCTTGTATAGGCCTGGTGCAGCACAACTGATATATATGAAcacttttttataattatttagtcAACTTGGAGAAACTGCAGCAAAATGAGGGTCATCGATACCGGACCTGATCCTTCAAAGGTATATCGACCAGAACATGAGGCAAATAAAACAACGGAAGAGAAAACTGGGTTCAGGAATTTTGAGAGTGGGGATCTTATTGAGCGGGTGTATAACACCTACAAACTGATGCACACCAACCAGACCATGGACTTTGTGAAGCAAAAGCATGCCGAGTGGGCCGGGTGCAGCCACACCAAGATGACTGTCATGGAAAGTCTGGATGCTCTGGACAAACTGGTGGATGAGTCTGACCCCGACGTTGACTTCCCCAACTCGTTCCATGCTTTCCAGACGGCGGAGGGGATTCGCAAGGCACACCCTGACAAAGATTGGTTCCAACTGGTGGGCCTCATACATGACATTGGGAAGATCATGGCTCTTTGGGGACAGCCGCAGTGGGCAGTTGTTGGCGACACCTTCCCAGTTGGCTGCCATTTCCAGAATTCGATTGTTTTCAAGGACTCTACCTTTGCGGAAAATCCAGATAACAACAACCCATCCTACAACACCAAATATGGGATATACAAGCCTAACTGTGGACTGGACAACGTGTACATGTCTTGGGGTCATGACGaatatatttacaGGGTGATGAAATTCAACAACTGCTCTATTCCAGAGGAGGGCTTGTACATGATTCGGTTCCACTCATTCTATCCCTGGCACACCCATGGAGACTACACATATCTCTGCAATGACAAGGATCTGAAGATGTTACCTTGGGTGAAAGAGTTCAACAAATTTGACCTCTATACGAAGAGTACAGACCTACCTGATGTTGAGAATCTGAAGCCATACTATCAGCGTCTCATTGACAAGTACTGCCCGGGGAAGCTGTACTGGTGAGAAGATGCATCCGTTCCAGGTGTCTGTATGCGTGTGCTGTAAAGGAGATCCACTTCAATCATGTTGTATAGTAATGCTTTTGTCTCAGTCTTCTCGCTGGGAAAacaaagtatgttttttgtaattgttcctacatacatgttaaatatgtcAAAATAGGATTCTACAATATTGTATCCCAGGAGTAACCCTTAACATTAGTTTATTACAactaaaatgcaattatattaaaGATTTGGGTTTTCATGTAATAAATACGCTTCTGTAGCTGTAGATCAGATCAGAGCTCTTGTAGTCTTTACAGATGTGTGCTATTCAAAAGGTCTGCTTTCCTGTTTGCCCTGTCACACAGCCGTTATCAAACATTGCAATAAAATGCAGATAACATACGACAGGATTGGAAGCTGCAAACTTCAAATACCCgattcaaaacaaattgaagacTTTCAGGAACTGATTTGCTaagattaataatataattcccATTATCTTATTAAATTATAAGAATGAATTAAATGGATGCTTCAGACATGA

Function

symbol description
miox Predicted to enable ferric iron binding activity and inositol oxygenase activity. Predicted to be involved in inositol catabolic process. Predicted to be located in cytoplasm. Orthologous to human MIOX (myo-inositol oxygenase).

NR:

description
PREDICTED: inositol oxygenase isoform X2

GO:

id name namespace
GO:0019310 inositol catabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005737 cytoplasm cellular_component
GO:0005506 iron ion binding molecular_function
GO:0050113 inositol oxygenase activity molecular_function

KEGG:

id description
K00469 MIOX; inositol oxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006809 True 1545 mRNA 0.42 10 20908714 20918410

Neighbor

gene id symbol gene type direction distance location
AMCG00006802 NA coding upstream 141653 20760427 ~ 20767061 (+)
AMCG00006803 NA coding upstream 157272 20721803 ~ 20751442 (+)
AMCG00006804 NA coding upstream 216101 20675866 ~ 20692613 (+)
AMCG00006801 NA coding upstream 234363 20667348 ~ 20674351 (+)
AMCG00006798 lamtor4,si:dkey-159a18.7,LOC107557308,LOC107590499,LOC107694163 coding upstream 261473 20645229 ~ 20647241 (+)
AMCG00006815 NA coding downstream 169951 21088361 ~ 21102151 (+)
AMCG00006818 NA coding downstream 258138 21176548 ~ 21200739 (+)
AMCG00006822 NA coding downstream 425232 21343642 ~ 21354607 (+)
AMCG00006825 iqsec3,LOC106609634,LOC107689713,LOC105020425 coding downstream 447984 21366394 ~ 21385133 (+)
AMCG00006823 NA coding downstream 580623 21499033 ~ 21505375 (+)
G112510 NA non-coding upstream 135648 20767536 ~ 20773066 (+)
G112470 NA non-coding upstream 183272 20647378 ~ 20725442 (+)
G112465 NA non-coding upstream 269728 20638696 ~ 20638986 (+)
G112438 NA non-coding upstream 337287 20565526 ~ 20571427 (+)
G112436 NA non-coding upstream 344926 20563498 ~ 20563788 (+)
G112535 NA non-coding downstream 1117 20919527 ~ 20923505 (+)
G112541 NA non-coding downstream 11824 20930234 ~ 20934218 (+)
G112564 NA non-coding downstream 104523 21022933 ~ 21023279 (+)
G112566 NA non-coding downstream 105869 21024279 ~ 21031984 (+)
G112573 NA non-coding downstream 137940 21056350 ~ 21056973 (+)
AMCG00006672 NA other upstream 6969239 13933666 ~ 13939475 (+)
G111197 NA other upstream 7865266 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 8256899 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 8585436 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 11340438 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 19087 20937497 ~ 20944977 (+)
G112567 NA other downstream 129926 21048336 ~ 21049038 (+)
G112600 NA other downstream 224455 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 346843 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 699222 21617632 ~ 21622508 (+)

Expression


Co-expression Network