Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006811 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 20937497 ~ 20944977 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0042221 | response to chemical | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006811 | True | 756 | mRNA | 0.47 | 5 | 20937547 | 20944977 |
| TU140941 | False | 437 | TUCP | 0.52 | 2 | 20937497 | 20938170 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006809 | miox,LOC102303880 | coding | upstream | 19087 | 20908714 ~ 20918410 (+) |
| AMCG00006802 | NA | coding | upstream | 170436 | 20760427 ~ 20767061 (+) |
| AMCG00006803 | NA | coding | upstream | 186055 | 20721803 ~ 20751442 (+) |
| AMCG00006804 | NA | coding | upstream | 244884 | 20675866 ~ 20692613 (+) |
| AMCG00006801 | NA | coding | upstream | 263146 | 20667348 ~ 20674351 (+) |
| AMCG00006815 | NA | coding | downstream | 143384 | 21088361 ~ 21102151 (+) |
| AMCG00006818 | NA | coding | downstream | 231571 | 21176548 ~ 21200739 (+) |
| AMCG00006822 | NA | coding | downstream | 398665 | 21343642 ~ 21354607 (+) |
| AMCG00006825 | iqsec3,LOC106609634,LOC107689713,LOC105020425 | coding | downstream | 421417 | 21366394 ~ 21385133 (+) |
| AMCG00006823 | NA | coding | downstream | 554056 | 21499033 ~ 21505375 (+) |
| G112541 | NA | non-coding | upstream | 3279 | 20930234 ~ 20934218 (+) |
| G112535 | NA | non-coding | upstream | 13992 | 20919527 ~ 20923505 (+) |
| G112510 | NA | non-coding | upstream | 164431 | 20767536 ~ 20773066 (+) |
| G112470 | NA | non-coding | upstream | 212055 | 20647378 ~ 20725442 (+) |
| G112465 | NA | non-coding | upstream | 298511 | 20638696 ~ 20638986 (+) |
| G112564 | NA | non-coding | downstream | 77956 | 21022933 ~ 21023279 (+) |
| G112566 | NA | non-coding | downstream | 79302 | 21024279 ~ 21031984 (+) |
| G112573 | NA | non-coding | downstream | 111373 | 21056350 ~ 21056973 (+) |
| G112754 | NA | non-coding | downstream | 1106701 | 22051678 ~ 22058486 (+) |
| G112755 | NA | non-coding | downstream | 1114395 | 22059372 ~ 22059605 (+) |
| AMCG00006672 | NA | other | upstream | 6998022 | 13933666 ~ 13939475 (+) |
| G111197 | NA | other | upstream | 7894049 | 13011184 ~ 13043448 (+) |
| AMCG00006636 | NA | other | upstream | 8285682 | 12620062 ~ 12651815 (+) |
| AMCG00006624 | NA | other | upstream | 8614219 | 12145745 ~ 12323278 (+) |
| AMCG00006565 | LOC103366858,LOC103380581 | other | upstream | 11369221 | 9563952 ~ 9568276 (+) |
| G112567 | NA | other | downstream | 103359 | 21048336 ~ 21049038 (+) |
| G112600 | NA | other | downstream | 197888 | 21142865 ~ 21203201 (+) |
| AMCG00006820 | NA | other | downstream | 320276 | 21265253 ~ 21304878 (+) |
| AMCG00006829 | NA | other | downstream | 672655 | 21617632 ~ 21622508 (+) |
| AMCG00006865 | hipk2 | other | downstream | 2564172 | 23509149 ~ 23554741 (+) |
