AMCG00006828


Basic Information

Item Value
gene id AMCG00006828
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 21622677 ~ 21623130 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006828
ATGTTGCAGGTGGGAGGAGCGGCAGTAATGGCGGTGGGCATCTGGACGCTGATTGACAAGAGTGACTACCTGAGCCTACTGGCTTCCAGCACATTCGCGGTCTCCGCCTACATCCTCATCTTCGCTGGCGGCCTGGTGATGATTACTGGCTTCCTGGGCTGCTGTGCTGTCATCAGAGAGCAGAGGAGCTGCCTCTCCATGAGGAACAGCCTCCTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006828 True 219 mRNA 0.58 2 21622677 21623130

Neighbor

gene id symbol gene type direction distance location
AMCG00006824 NA coding upstream 68027 21525700 ~ 21554650 (+)
AMCG00006823 NA coding upstream 117302 21499033 ~ 21505375 (+)
AMCG00006825 iqsec3,LOC106609634,LOC107689713,LOC105020425 coding upstream 237544 21366394 ~ 21385133 (+)
AMCG00006822 NA coding upstream 268070 21343642 ~ 21354607 (+)
AMCG00006818 NA coding upstream 421938 21176548 ~ 21200739 (+)
AMCG00006827 LOC107593980,LOC107694254,LOC107720401 coding downstream 46246 21669376 ~ 21682306 (+)
AMCG00006833 tspan9a,LOC107559293,LOC107738414,LOC107084745,LOC107672591,LOC107587031,LOC103380054 coding downstream 166750 21789880 ~ 21794405 (+)
AMCG00006830 LOC105018129,LOC106573177,LOC106561385,LOC107587031,LOC107738414 coding downstream 212745 21835875 ~ 21853017 (+)
AMCG00006831 LOC100694777,LOC104940279,LOC101482493,LOC106573176 coding downstream 232771 21855901 ~ 21868236 (+)
AMCG00006836 LOC108264267,LOC107559327,LOC108414616 coding downstream 314245 21937375 ~ 21994328 (+)
G112573 NA non-coding upstream 565704 21056350 ~ 21056973 (+)
G112566 NA non-coding upstream 590693 21024279 ~ 21031984 (+)
G112564 NA non-coding upstream 599398 21022933 ~ 21023279 (+)
G112541 NA non-coding upstream 688459 20930234 ~ 20934218 (+)
G112535 NA non-coding upstream 699172 20919527 ~ 20923505 (+)
G112754 NA non-coding downstream 428548 22051678 ~ 22058486 (+)
G112755 NA non-coding downstream 436242 22059372 ~ 22059605 (+)
G112756 LOC108412581 non-coding downstream 440574 22063704 ~ 22064035 (+)
G112757 NA non-coding downstream 442465 22065595 ~ 22065804 (+)
G112758 NA non-coding downstream 445091 22068221 ~ 22068423 (+)
AMCG00006829 NA other upstream 169 21617632 ~ 21622508 (+)
AMCG00006820 NA other upstream 317799 21265253 ~ 21304878 (+)
G112600 NA other upstream 419476 21142865 ~ 21203201 (+)
G112567 NA other upstream 573639 21048336 ~ 21049038 (+)
AMCG00006811 NA other upstream 677700 20937497 ~ 20944977 (+)
AMCG00006865 hipk2 other downstream 1886019 23509149 ~ 23554741 (+)
AMCG00006878 ndufb2,LOC102790702 other downstream 2408959 24032089 ~ 24036112 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other downstream 2681566 24304696 ~ 24335916 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other downstream 2885873 24509003 ~ 24587119 (+)
G113369 LOC108442871 other downstream 3994937 25618067 ~ 25618445 (+)

Expression


Co-expression Network