AMCG00006829


Basic Information

Item Value
gene id AMCG00006829
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 21617632 ~ 21622508 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006829
GAGGAAAAGATGTCTCGATTGTATAAAGATGAACAAGATGACTGGGTGACTGTCTGTTTGAAGTACCTTCTCTTTGTATTCAATTTCCTCTTCTGGAGTGTCACACTCCCAGTCAATCCACACAATGTCTTCAAGCTGCACGGTGAATGTGTGAACTGCGCCTTAAAGACAGTATTAGATCTTATTTCACTTATTGACTATGAGATGTAG
>TU141126
gGAGGAAAAGATGTCTCGATTGTATAAAGATGAACAAGATGACTGGGTGACTGTCTGTTTGAAGTACCTTCTCTTTGTATTCAATTTCCTCTTCTGGAGTGTCACACTCCCAGTCAATCCACACAATGTCTTCAAGCTGCACGGTGAATGTGTGAACTGCGCCTTAAAGACAGGAAGTAGAAGACAGCCACACACTCTAAAGATCCTGTAACCCAACCTGAATGTAGCAGGCTATACAGAAAAAGGTCACCTGGGATGTCTGCTAAATCGCTTGCTGCTTAGATGTAGTCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006829 False 210 mRNA 0.40 3 21617633 21622508
TU141126 True 294 lncRNA 0.44 4 21617632 21620411

Neighbor

gene id symbol gene type direction distance location
AMCG00006824 NA coding upstream 62982 21525700 ~ 21554650 (+)
AMCG00006823 NA coding upstream 112257 21499033 ~ 21505375 (+)
AMCG00006825 iqsec3,LOC106609634,LOC107689713,LOC105020425 coding upstream 232499 21366394 ~ 21385133 (+)
AMCG00006822 NA coding upstream 263025 21343642 ~ 21354607 (+)
AMCG00006818 NA coding upstream 416893 21176548 ~ 21200739 (+)
AMCG00006828 NA coding downstream 169 21622677 ~ 21623130 (+)
AMCG00006827 LOC107593980,LOC107694254,LOC107720401 coding downstream 46868 21669376 ~ 21682306 (+)
AMCG00006833 tspan9a,LOC107559293,LOC107738414,LOC107084745,LOC107672591,LOC107587031,LOC103380054 coding downstream 167372 21789880 ~ 21794405 (+)
AMCG00006830 LOC105018129,LOC106573177,LOC106561385,LOC107587031,LOC107738414 coding downstream 213367 21835875 ~ 21853017 (+)
AMCG00006831 LOC100694777,LOC104940279,LOC101482493,LOC106573176 coding downstream 233393 21855901 ~ 21868236 (+)
G112573 NA non-coding upstream 560659 21056350 ~ 21056973 (+)
G112566 NA non-coding upstream 585648 21024279 ~ 21031984 (+)
G112564 NA non-coding upstream 594353 21022933 ~ 21023279 (+)
G112541 NA non-coding upstream 683414 20930234 ~ 20934218 (+)
G112535 NA non-coding upstream 694127 20919527 ~ 20923505 (+)
G112754 NA non-coding downstream 429170 22051678 ~ 22058486 (+)
G112755 NA non-coding downstream 436864 22059372 ~ 22059605 (+)
G112756 LOC108412581 non-coding downstream 441196 22063704 ~ 22064035 (+)
G112757 NA non-coding downstream 443087 22065595 ~ 22065804 (+)
G112758 NA non-coding downstream 445713 22068221 ~ 22068423 (+)
AMCG00006820 NA other upstream 312754 21265253 ~ 21304878 (+)
G112600 NA other upstream 414431 21142865 ~ 21203201 (+)
G112567 NA other upstream 568594 21048336 ~ 21049038 (+)
AMCG00006811 NA other upstream 672655 20937497 ~ 20944977 (+)
AMCG00006672 NA other upstream 7678157 13933666 ~ 13939475 (+)
AMCG00006865 hipk2 other downstream 1886641 23509149 ~ 23554741 (+)
AMCG00006878 ndufb2,LOC102790702 other downstream 2409581 24032089 ~ 24036112 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other downstream 2682188 24304696 ~ 24335916 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other downstream 2886495 24509003 ~ 24587119 (+)
G113369 LOC108442871 other downstream 3995559 25618067 ~ 25618445 (+)

Expression


Co-expression Network