AMCG00006832


Basic Information

Item Value
gene id AMCG00006832
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 21866887 ~ 21877250 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006832
CCGGAGCTGATGCGCATTGCTGGCTGCTCATTGGCCGCTGGAGAGGGGCGGGGCCTGGGCCGCTGTGCCGCTGTTCCTCCGCAGCAGCGCAGCAGCAGCGCAGACATGCTCTCTGTCAGCCTCCGAGACTGCGAGGCGTGGCAGTCTGAGGGTCTTCCTCTCTCCACTGCCAGCAATGAGGCCTGTAAAATGTACGATGCCATTCTCACGCAGTACGTGACCTGGCGCAATGATACGAGCCTTGGAGGGATAGAAGGATGCATTTCTAAGCTGCAGGCTGCAGACCCAAACTTTGTGATGGGCCACGTCATCGCCAGTGGGCTGGAACTGATTGGGACCGGACGCTCGGTGCTACTGGACGATCAACTGGCCAGCGCCGTCAGGAAGACAGTGGAGCTGTCAAAGACCCAGAGCATCACGGAGCGGGAGCGGCTGCATGTGTCCgcaatggaaatgttttcaaaaggCTGTTTCCCTAAAGCCTGTGTCCTGTGGGATGAGATACTCCTGGACCACCCAACAGATCTGCTGGCACTGAAGTTTGCTCACGACACGTACTTCTACATCGGCCATCAGACGGAGATGAGAGATTCGGTCGCCCGGGTTCTTCCTCACTGGAAGCCCCACATGCCACTGTACAGCTACCTTAAAGGTATATATTCCTTTGGACTGCTGGAAACAAAACTGTATGACCAGGCTGAAAAAATTGCAAAAGAGGGACTGGCCCTGACTCCTGGGGACGCCTGGGCCGTACACGCGGTCTCCCATGTTCATGAGATGAGAGCGGAGGTGGAGAAAGGATTAAAGTTCATGGAGCAAACGGAAAACAACTGGAAGaaATGTGACATGCTTGCTTGCCACAATTATTGGCACTGGGCTTTGAATTTCATTGAGAAGGGAGAATATGAAGCTGCCTTGGGAATATATGACAGCCAGATTTCCAAGCGCTGTTTCTCCTCCGAGGCCATGCTGGACACCGTGGATGCCTGTTCGATGCTCTACAGACTCGAACTGGAGGgtgtgaaGGTGGGGGATCGGTGGAAGGAGCTTCAGAAGGTGACTAAGCCTCACCGAGAGGACCACGTGCTGCTGTTCAATGATCTTCACTTCCTCATGACGTCTCTGGGAGCTAAAGATGAGGAAACCTCTCGCCGTCTGTTGGAGACCTTATGGGAGCTTGCACAGGCACCAGGAGAAAACCACACGCATCAACTGGCCACCAGCATAGGTCTGCCCATGTGTGAGGCCCTCATCGAGTTTGACAAAGGCAACTACAGCCGAGTGGTGGAACTGCTGCTGCCCATTCGGTACCACTTCACGGACATAGGAGGCAGCGACGCTCAGAGAGATGTCTTTTGTCAGTTACTGATCCACGCAGCGATGAAATCACAGAACAAACGACACCAGAAACTTGCCAGGTCCCTCTTAGTGGAACGAGATGCTTTCAGACCCAGCTCCCCTCTGACAGATAGACTGGTTCAAAGGGCCCTGGCTTTGCATAATTTGGATTAGACCTACTTATCCATCACCACCGAAAAATAAAATGGCCGCTGTAGGTTGTATTAGTGAGGATATCAGCTTGTTAAGAGGAACTATGAGTAGCAGGGACAGAGGGAATAGTTTTATCATAGCAGTGAGATCTGAAAGATTCCTTTGTTGGACACCATAATCATAGTTATTCTGAATTGTTAAAGAATATTGCTCAGTttgaatatgcatttatattgattgattttactcATTATTAATCACACAATTGAATTGTAAAATCTGTACAAGTCTAATAGAAGTATTTTACTAAATGCAGGTGCAGTAGATTTGCTAATCTCAAGCTATgtat

Function

GO: NA

KEGG:

id description
K24942 TTC38; tetratricopeptide repeat protein 38

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006832 True 1840 mRNA 0.50 14 21866887 21877250

Neighbor

gene id symbol gene type direction distance location
AMCG00006826 LOC100700740,LOC101481124,LOC102199940 coding downstream 273166 21559785 ~ 21593721 (-)
AMCG00006821 NA coding downstream 431700 21414320 ~ 21435187 (-)
AMCG00006819 wash1,LOC103045331,LOC107662897,LOC107735466 coding downstream 631118 21203051 ~ 21235769 (-)
AMCG00006817 NA coding downstream 694038 21163972 ~ 21172849 (-)
AMCG00006816 NA coding downstream 737213 21107210 ~ 21129674 (-)
AMCG00006837 NA coding upstream 142642 22019892 ~ 22049178 (-)
AMCG00006838 NA coding upstream 180994 22058244 ~ 22128302 (-)
AMCG00006839 NA coding upstream 322716 22199966 ~ 22202511 (-)
AMCG00006840 LOC105913426,LOC108429453 coding upstream 330413 22207663 ~ 22230259 (-)
AMCG00006845 NA coding upstream 657151 22534401 ~ 22543403 (-)
G112705 NA non-coding downstream 13875 21810365 ~ 21853012 (-)
G112589 NA non-coding downstream 770579 21095341 ~ 21096308 (-)
G112568 NA non-coding downstream 835015 21024706 ~ 21031872 (-)
G112563 NA non-coding downstream 849147 21017201 ~ 21017740 (-)
G112562 NA non-coding downstream 850839 21015373 ~ 21016048 (-)
G112783 NA non-coding upstream 177372 22054622 ~ 22058136 (-)
G112809 NA non-coding upstream 380299 22257549 ~ 22257974 (-)
G112878 akr1d1,LOC106917221,LOC103465917,LOC103134490,LOC106953618 non-coding upstream 792610 22669860 ~ 22670883 (-)
G112903 NA non-coding upstream 889023 22766273 ~ 22772685 (-)
G112953 NA non-coding upstream 1064209 22941459 ~ 22941670 (-)
AMCG00006813 NA other downstream 902325 20854057 ~ 20964562 (-)
AMCG00006807 NA other downstream 1213228 20647320 ~ 20653659 (-)
G112420 NA other downstream 1630681 20235856 ~ 20236206 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other downstream 2230962 19633093 ~ 19635925 (-)
AMCG00006773 tmem243b,tmem243 other downstream 2234992 19623155 ~ 19631895 (-)
AMCG00006841 NA other upstream 253245 22130495 ~ 22197664 (-)
AMCG00006854 NA other upstream 1075926 22953176 ~ 22958306 (-)
G113050 NA other upstream 1526925 23404175 ~ 23407207 (-)
AMCG00006866 NA other upstream 1690905 23568155 ~ 23571133 (-)
G113530 NA other upstream 4622765 26500015 ~ 26500681 (-)

Expression


Co-expression Network