AMCG00006834


Basic Information

Item Value
gene id AMCG00006834
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 21996225 ~ 21999726 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006834
GCACCAGAAAGTTTATGTGCAACCGGCATGCATGACTGTGACCCAAATCTGGCCACTTGCATAGATGAGACTTCCAGCGCACAGAATCAATCTGCATATTATTGTGTGTGCAAGACGGGGTACcaaggaaatggaaaaactggGAATTGCTCTGATATCGATGAGTGTAACAGTCAGAACGGATTCTGCTCTCAGGTGTGTGTGAACTCTGCCGGGAGTTACCACTGTGAGTGCGACACTGGGTTTGTCTCCAGTGAGAACACCTGCGCAGATATCAATGAGTGTGAGACTCTGAATGGACACTGCTCTCAGCTCTGTGTCAATGCTGTGGGGAGCTACCGGTGCGAGTGCCACGCTGGGTTTACCCTGAGTGAGGAccacaacacctgcacagACACCAACGAGTGTGCAGTTGAAAACGCTGGCTGCTCCCAACTCTGCAGCAACACAGCAGGAAGCTACACCTGTCTGTGCCATCCAGGCTACTCCTTGAATAATGACAACACAGTCTGTTCAGGTAACTGCAGTTTTAGTATAGCATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006834 True 543 mRNA 0.50 4 21996225 21999726

Neighbor

gene id symbol gene type direction distance location
AMCG00006836 LOC108264267,LOC107559327,LOC108414616 coding upstream 1897 21937375 ~ 21994328 (+)
AMCG00006831 LOC100694777,LOC104940279,LOC101482493,LOC106573176 coding upstream 127989 21855901 ~ 21868236 (+)
AMCG00006830 LOC105018129,LOC106573177,LOC106561385,LOC107587031,LOC107738414 coding upstream 143208 21835875 ~ 21853017 (+)
AMCG00006833 tspan9a,LOC107559293,LOC107738414,LOC107084745,LOC107672591,LOC107587031,LOC103380054 coding upstream 201820 21789880 ~ 21794405 (+)
AMCG00006827 LOC107593980,LOC107694254,LOC107720401 coding upstream 313919 21669376 ~ 21682306 (+)
AMCG00006835 NA coding downstream 4626 22004352 ~ 22013831 (+)
AMCG00006843 NA coding downstream 355854 22355580 ~ 22399845 (+)
AMCG00006842 LOC105018463,LOC106560992,LOC106584495,LOC107701192,LOC103380318,LOC105913395,LOC101155025,LOC105938539 coding downstream 400368 22400094 ~ 22447422 (+)
AMCG00006844 akr1d1,LOC108425343,LOC105020260,LOC108240983,LOC102198112 coding downstream 653138 22652864 ~ 22672256 (+)
AMCG00006849 kdm5a coding downstream 689458 22689184 ~ 22714844 (+)
G112573 NA non-coding upstream 939252 21056350 ~ 21056973 (+)
G112566 NA non-coding upstream 964241 21024279 ~ 21031984 (+)
G112564 NA non-coding upstream 972946 21022933 ~ 21023279 (+)
G112541 NA non-coding upstream 1062007 20930234 ~ 20934218 (+)
G112535 NA non-coding upstream 1072720 20919527 ~ 20923505 (+)
G112754 NA non-coding downstream 51952 22051678 ~ 22058486 (+)
G112755 NA non-coding downstream 59646 22059372 ~ 22059605 (+)
G112756 LOC108412581 non-coding downstream 63978 22063704 ~ 22064035 (+)
G112757 NA non-coding downstream 65869 22065595 ~ 22065804 (+)
G112758 NA non-coding downstream 68495 22068221 ~ 22068423 (+)
AMCG00006829 NA other upstream 373717 21617632 ~ 21622508 (+)
AMCG00006820 NA other upstream 691347 21265253 ~ 21304878 (+)
G112600 NA other upstream 793024 21142865 ~ 21203201 (+)
G112567 NA other upstream 947187 21048336 ~ 21049038 (+)
AMCG00006811 NA other upstream 1051248 20937497 ~ 20944977 (+)
AMCG00006865 hipk2 other downstream 1509423 23509149 ~ 23554741 (+)
AMCG00006878 ndufb2,LOC102790702 other downstream 2032363 24032089 ~ 24036112 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other downstream 2304970 24304696 ~ 24335916 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other downstream 2509277 24509003 ~ 24587119 (+)
G113369 LOC108442871 other downstream 3618341 25618067 ~ 25618445 (+)

Expression


Co-expression Network