AMCG00006837


Basic Information

Item Value
gene id AMCG00006837
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 22019892 ~ 22049178 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006837
ATGAGCGCCACAGTCCAGAGAAAGCACCTAGTGAGCGCCATTTACTTAGAGGACCTCAACCAGGAGCCAAATGAAACTCCAACTGATAACAGAGaaaacaagACATACAGTGTTGAGCAAGCTATAGAAGCCATTGGTTTTGGTCGATTCCATGTTATCCTGTATGTTATCATGGGTAGTTCTATAATTGTGGAAGCCATTGAGATAATGTTGCTGGCTGTTGTGTCTCCTGCCATTCGTTGTGAGTGGCGTCTAAAAGACTGGCAGGTGGCTCTTGTCTCAACGTGCATGGGATACCTGGCAGACAGATATGGACGCTGGAAGGTAGTGTTTGGCTGTTTTGCCTGGTCATTGTATTTCTCCTTTTTGACGTCTTTCTCACCCTCCTATGGCTGGTTTGTCTTCCTGCGCACCATGGTGGGAGGTGGTGTGTCGGGGACTGCTCAGGGATTTGTCTTGCAAGCTGAATTTATACCGGCAAAATACAGAGGCTATTTGACACCATTGTCTCAGatTTTCTGGATGTGCGGCTCGTTTTTCATGGTGTTTTTGGGCATGACAGTCATCCCCACCCTCGGCTGGCGTTGGATGATTCGCCTTTCCATCATCCCCagcatcattttaattattcttttcaaGTTCATTCCCGAGTCGGCCCGGTACAACGTCTCTGCGGGGAACGTCAGAGGCACCATGGAAACCCTACAGAGCATCGCCAGAATGAATCGCTCCAGTCTGCCTGAGGGAAAACTGATGGAGTCAGTGACTGAAAAGAGAGGGAACTTCAAAAGTCTACTTGAACCTTCCTTCAGGAGGACATCCATCATCCTGTGGAATCTGTTTATTGCCTCATTTTCATACTATGGTGCCGTTCTGGGCAGCTCTGAGCTTCTGGAGCGAAACCTGCTGTGCGTGACTGACAGTGCGCCACATACCGGGGTCCTGCATTCGGACGACACGCCCTGCTACTGCAAGCCTTTCGGACAGTCTGATTACCACACCATGCTTATTAGCACCTTGGGAGAGGTAGCATTAATCCCACTGAATATGATACTGCTGAACATTTGTGGGCGAAGGTTTTGTCTGGGGTTCTTGATGATGTCATCAGGGATTTTCTTTCTACTGCTTAATATCTGCACAACTGCGCTTGGCTTCACAGCTTTGTTCTTCATCCTCCGTGCCTTGGTGGCAATGGTTTTTAACACGGTGTACCTGTATACTGCTGAGGTTTACCCCACAACAGTGAGAGCCATAGGGATGGGATTCTGTACCTGCTTCAGCCGCGTCGGGGGCATGGTGGCTCCCTTCATAGCTCAGGTACTGATGAGCAATGACAAGTTGCAGCTTGTGAATTCCATCCAGCTACAGGAATTTGAACCGAATGAAGATGAAGCTCCAAAGAGTCCAACTGTCCAAGATGGTAAAGAAGaggaGAAAACGTACAGCGTGGAACAAGCGGTTGAAACAATCGGCTTTGGGCGCTTCCACATTCTTCTATTTTTAATCATGGGCAGTGCCAATATCGTTGAAGCCATTGAGATCATGTTGCTGGCCGTCGTCTCGCCAGAGGTCCGATGCGAGTGGCATCTGCAGGACTGGCAAGTGGCACTGGTCTCAACGatgGTGTTCTTTGGCTTCATGACTTGTGGTGCCTTGAGTGGTTATGTGGCTGACAGATATGGACGCTGGAAGGTTGTGTTTGGAGCCTTTATCTGGGGCGCTTACTTCTCCCTTCTGACCTCTTTCTCACCATCTTACGGCTGGTTTATCTTCCTGCGTGCCATGGTGGGGTGTGGAGTGGCCGGGACTTCTCAAGGgtttgttttaaaaacagagttCATTCCTGCAAAGTACAGAGGCTACTTACTACCATTGTCACAGATTTTCTGGATGTTGGGTGCCGTGTTCATGGTGTTACTTGGCATGACAGTGATTCCCACCCTGGGCTGGCGCTGGATGATTCGCCTGTCCATTATCCCAAGTTTGATTTTACTCGTTCTCTTTCAGTTCATTCCAGAGTCGGCCCGGTACAATGTCTCTGCAGGGAACGTCAAAGCCGCCGTGCAGACCCTCGAACACATCGCCAGAATGAATCGTGCCTCTCTGCCAGAGGGGAGACTGATGGAGCCAGCAGTGacagagagaggaagttTTTACACCTTAGTGAGTTCCACATTCCGGAGGACCTCGATGCTCTTGTGGTATTCATGGTTTGTCGCTTCCTTTTCGTATTACGGCTCTGTCCTCGGAAGCTCAGAGCTCCTGGAGAAGAATCTGCTTTGCATCACGGACGCCGAGGTGGAACACAGGGTGTTGAACCTGGAGAACGTCCCCTGTTACTGCATTCCCTTTGGCACCGCAGATTACCACACCTTGCTGATCAGCTCCGTGGGAGAAGTGTCCCTTATCCCCGTGAATATGATCCTATTAAACTTCATAGGACGAAAATATACCATGGCCATTTTAATGGTATCTTCTGGGGTTTTCTTCCTGCTTCTCAGTATCTGCTCAACACTGTTTGGCTTTACAGTATTGCTTTTCCTGCTTCGTTCCCTGGTGGCAATGAATTTTAGtgctacatacatttatactgCAGAGGTCTTTCCCACTGCAGTGCGATCCATAGGAATGGGGGTCTGCACCTCCTTCAGTCGTATAGGTGGGATGATCGCACCGTTTGTAGCTCAGGTTTTGATGGCCAAGTCGGTAATAACCGCTTTGGTGCCCTTTGCGGAGATGTCTACTGACGGGGAGCTCACCTCCTACACCGGCCCGGCTGCAGACTCTGTGTGTTCAGACCCGTATGAGGAAACGCTGGGAAGAGTAGAAAGAAAATGGCAGCCAAGTGGGAAAATCAGCTGGGGGCACAGAACTGGAGCTGGGCAGATGAAACAGAAGAgacagagcagcagcaggaacaGGAAAAGCAAAGCCACCAACACAATAGCCACGATCATCCCGGCGGAGCGCATCGCATCCCACGGCTCAATGGCCTGGTAA

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006837 True 3000 mRNA 0.50 29 22019892 22049178

Neighbor

gene id symbol gene type direction distance location
AMCG00006832 NA coding downstream 142642 21866887 ~ 21877250 (-)
AMCG00006826 LOC100700740,LOC101481124,LOC102199940 coding downstream 426171 21559785 ~ 21593721 (-)
AMCG00006821 NA coding downstream 584705 21414320 ~ 21435187 (-)
AMCG00006819 wash1,LOC103045331,LOC107662897,LOC107735466 coding downstream 784123 21203051 ~ 21235769 (-)
AMCG00006817 NA coding downstream 847043 21163972 ~ 21172849 (-)
AMCG00006838 NA coding upstream 9066 22058244 ~ 22128302 (-)
AMCG00006839 NA coding upstream 150788 22199966 ~ 22202511 (-)
AMCG00006840 LOC105913426,LOC108429453 coding upstream 158485 22207663 ~ 22230259 (-)
AMCG00006845 NA coding upstream 485223 22534401 ~ 22543403 (-)
AMCG00006848 NA coding upstream 538482 22587660 ~ 22589738 (-)
G112705 NA non-coding downstream 166880 21810365 ~ 21853012 (-)
G112589 NA non-coding downstream 923584 21095341 ~ 21096308 (-)
G112568 NA non-coding downstream 988020 21024706 ~ 21031872 (-)
G112563 NA non-coding downstream 1002152 21017201 ~ 21017740 (-)
G112562 NA non-coding downstream 1003844 21015373 ~ 21016048 (-)
G112783 NA non-coding upstream 5444 22054622 ~ 22058136 (-)
G112809 NA non-coding upstream 208371 22257549 ~ 22257974 (-)
G112878 akr1d1,LOC106917221,LOC103465917,LOC103134490,LOC106953618 non-coding upstream 620682 22669860 ~ 22670883 (-)
G112903 NA non-coding upstream 717095 22766273 ~ 22772685 (-)
G112953 NA non-coding upstream 892281 22941459 ~ 22941670 (-)
AMCG00006813 NA other downstream 1055330 20854057 ~ 20964562 (-)
AMCG00006807 NA other downstream 1366233 20647320 ~ 20653659 (-)
G112420 NA other downstream 1783686 20235856 ~ 20236206 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other downstream 2383967 19633093 ~ 19635925 (-)
AMCG00006773 tmem243b,tmem243 other downstream 2387997 19623155 ~ 19631895 (-)
AMCG00006841 NA other upstream 81317 22130495 ~ 22197664 (-)
AMCG00006854 NA other upstream 903998 22953176 ~ 22958306 (-)
G113050 NA other upstream 1354997 23404175 ~ 23407207 (-)
AMCG00006866 NA other upstream 1518977 23568155 ~ 23571133 (-)
G113530 NA other upstream 4450837 26500015 ~ 26500681 (-)

Expression


Co-expression Network