AMCG00006843


Basic Information

Item Value
gene id AMCG00006843
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 22355580 ~ 22399845 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006843
ATGGGCCCCCTGGACACATTCGAGAAGCTAGTGTGGGATCCAAGAAGTCGCAGCAGAAGGAAGGCAGGAAACGGTGACAGAAGCCCCAGGATCGAGGCCTGCAACACAGCAGCTGGCATTCAGAGCAATGGTAGGCTTTTGCCTGACACTCAGAAACACGTCCAACAGCAAGGAGGCAACGGAAAACGGACAAACATGATGACTCATGAACCCCCTCCCCAACACACCAATCAGTATAGcctgTTTCGCCCACCTCAGGGATTACCAGACAATGAGGTCTGGGAGAAGGTCATATTAATTTATGCAGATGCTTCCCAGACCTTTAAAGACCACCCAGCTATGACCATGGGCACAGCAGGGCCAGAACTGAAGCCAGCAAAGGCCCACCCATTCTACTTTACATCTCATGGTGACTTTCAACAGCCAAAAGATCACACGATCTCTCTGCTGAAGCGACCCTGTGAAGTCATGTTTGGACCCTTTTTGTGCACTGCAACCACCTTTCATTTGAAGCTTTCATCGCTGATAGGGATTGTGACTAAAGCTGACGTCGATTATCCGATTCAAaagaagacaaaacagaaagttaaagcAGCCaaaggaatgaatgaatgggAAACAGAGCGCGGAGTGAGGAGGCACATAGCCCGACCCATCTCCTCAATGCCCTTGATTCAGCAGAGAGGCGTGGAGAGTTTTATATTACCTGCAGAATACCTGGAGCTACATGGCAAGAACTTAAGATGTCGTCAAAGCAGCACGATCGCAGTGGAGATGTCAGGGGGATTCCTAAACACCTCTTCCGTGTCAAAGGGGCTGGTTTTGAAGCGTGGGGGGGAGTTTTACCTGGGGGACATTAGCACAGGCAAGCtatttttgaaaggaaagaGTGACATACATGCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006843 True 906 mRNA 0.49 8 22355580 22399845

Neighbor

gene id symbol gene type direction distance location
AMCG00006835 NA coding upstream 341749 22004352 ~ 22013831 (+)
AMCG00006834 NA coding upstream 355854 21996225 ~ 21999726 (+)
AMCG00006836 LOC108264267,LOC107559327,LOC108414616 coding upstream 361252 21937375 ~ 21994328 (+)
AMCG00006831 LOC100694777,LOC104940279,LOC101482493,LOC106573176 coding upstream 487344 21855901 ~ 21868236 (+)
AMCG00006830 LOC105018129,LOC106573177,LOC106561385,LOC107587031,LOC107738414 coding upstream 502563 21835875 ~ 21853017 (+)
AMCG00006842 LOC105018463,LOC106560992,LOC106584495,LOC107701192,LOC103380318,LOC105913395,LOC101155025,LOC105938539 coding downstream 249 22400094 ~ 22447422 (+)
AMCG00006844 akr1d1,LOC108425343,LOC105020260,LOC108240983,LOC102198112 coding downstream 253019 22652864 ~ 22672256 (+)
AMCG00006849 kdm5a coding downstream 289339 22689184 ~ 22714844 (+)
AMCG00006850 NA coding downstream 354843 22754688 ~ 22772629 (+)
AMCG00006851 usp15 coding downstream 374875 22774720 ~ 22805606 (+)
G112807 NA non-coding upstream 44120 22294688 ~ 22311460 (+)
G112802 NA non-coding upstream 97194 22257550 ~ 22258386 (+)
G112762 NA non-coding upstream 143788 22137485 ~ 22211792 (+)
G112758 NA non-coding upstream 287157 22068221 ~ 22068423 (+)
G112757 NA non-coding upstream 289776 22065595 ~ 22065804 (+)
G112832 NA non-coding downstream 55917 22455762 ~ 22455964 (+)
G112868 NA non-coding downstream 283115 22682960 ~ 22683187 (+)
G112938 NA non-coding downstream 464140 22863985 ~ 22864508 (+)
G112940 NA non-coding downstream 477544 22877389 ~ 22881356 (+)
G112954 NA non-coding downstream 553335 22953180 ~ 22956200 (+)
AMCG00006829 NA other upstream 733072 21617632 ~ 21622508 (+)
AMCG00006820 NA other upstream 1050702 21265253 ~ 21304878 (+)
G112600 NA other upstream 1152379 21142865 ~ 21203201 (+)
G112567 NA other upstream 1306542 21048336 ~ 21049038 (+)
AMCG00006811 NA other upstream 1410603 20937497 ~ 20944977 (+)
AMCG00006865 hipk2 other downstream 1109304 23509149 ~ 23554741 (+)
AMCG00006878 ndufb2,LOC102790702 other downstream 1632244 24032089 ~ 24036112 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other downstream 1904851 24304696 ~ 24335916 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other downstream 2109158 24509003 ~ 24587119 (+)
G113369 LOC108442871 other downstream 3218222 25618067 ~ 25618445 (+)

Expression


Co-expression Network