AMCG00006848


Basic Information

Item Value
gene id AMCG00006848
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 22587660 ~ 22589738 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006848
ATGTTTGAATCCATCCATTTAGTGGAGATGGAGAAGCAATGGTACCTGTTTGCTCTTCTAAGGGTACAACATGGGAGGATTCGGATGGACAGATCAGAAACCATCCGCTGTATAAAATCTTGCCTGCCCAGGGATTTCAACTGCATGCAGGATAATGTCCACACCATCTCGTACACAGTCATCTCCCTGCCAACATTCAGGGATTTCAGCAAACCAGAAGAGATTGTTTTTCTAAGATCCATGCCGCCAGCCTATTCACCAGCCCATCATGATATCCCAGACATTGTGTTCGACATCTTAGAGGGGAACCTCCAAAACTCCTTTGACATCGTCAAGCGGTACGATAGTGGCATGACAGTGGGTGAGTGGCGTTCATTTGTATTTGGGGTCTTTTATTTTGAGGTTTCAGAAGCCTCTAGCCAACTAACATTAAAGGGCAAT

Function

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006848 True 441 mRNA 0.45 3 22587660 22589738

Neighbor

gene id symbol gene type direction distance location
AMCG00006845 NA coding downstream 44257 22534401 ~ 22543403 (-)
AMCG00006840 LOC105913426,LOC108429453 coding downstream 357401 22207663 ~ 22230259 (-)
AMCG00006839 NA coding downstream 385149 22199966 ~ 22202511 (-)
AMCG00006838 NA coding downstream 459358 22058244 ~ 22128302 (-)
AMCG00006837 NA coding downstream 538482 22019892 ~ 22049178 (-)
AMCG00006846 NA coding upstream 2361 22592099 ~ 22607383 (-)
AMCG00006847 NA coding upstream 36663 22626401 ~ 22651517 (-)
AMCG00006855 NA coding upstream 291776 22881514 ~ 22928405 (-)
AMCG00006862 si:ch211-125a15.1,LOC107743608,LOC107726025,LOC107580661,LOC107592225,LOC107658829 coding upstream 697518 23287256 ~ 23302174 (-)
AMCG00006864 NA coding upstream 785629 23375367 ~ 23376805 (-)
G112809 NA non-coding downstream 329686 22257549 ~ 22257974 (-)
G112783 NA non-coding downstream 529524 22054622 ~ 22058136 (-)
G112705 NA non-coding downstream 734648 21810365 ~ 21853012 (-)
G112589 NA non-coding downstream 1491352 21095341 ~ 21096308 (-)
G112568 NA non-coding downstream 1555788 21024706 ~ 21031872 (-)
G112878 akr1d1,LOC106917221,LOC103465917,LOC103134490,LOC106953618 non-coding upstream 80122 22669860 ~ 22670883 (-)
G112903 NA non-coding upstream 176535 22766273 ~ 22772685 (-)
G112953 NA non-coding upstream 351721 22941459 ~ 22941670 (-)
G112979 NA non-coding upstream 564130 23153868 ~ 23154903 (-)
G113013 NA non-coding upstream 731339 23321077 ~ 23321771 (-)
AMCG00006841 NA other downstream 389996 22130495 ~ 22197664 (-)
AMCG00006813 NA other downstream 1623098 20854057 ~ 20964562 (-)
AMCG00006807 NA other downstream 1934001 20647320 ~ 20653659 (-)
G112420 NA other downstream 2351454 20235856 ~ 20236206 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other downstream 2951735 19633093 ~ 19635925 (-)
AMCG00006854 NA other upstream 363438 22953176 ~ 22958306 (-)
G113050 NA other upstream 814437 23404175 ~ 23407207 (-)
AMCG00006866 NA other upstream 978417 23568155 ~ 23571133 (-)
G113530 NA other upstream 3910277 26500015 ~ 26500681 (-)
G113645 ptn,LOC106609498 other upstream 4812862 27402600 ~ 27527348 (-)

Expression


Co-expression Network