AMCG00006859


Basic Information

Item Value
gene id AMCG00006859
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 23335086 ~ 23343567 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006859
AAACCAAGACAAAGGAAAAGGACAGTGCACCAGTCAGTACTTTAGTCAACATGTCGAATGCTGACTTGTCTGCCTGTGTTACAAAGCTTCTCTGTGGTCACCAAGGATGTTTGATTTACAGGGAAGTTTATAAGGTAGTGTGCCAGACTTTCAGTGTTGCACATCAGTGGCTCTTTGGTATCTTAAGAGATGACAGTAAATTTGTCATACTTCAAGGCAAAGAAGAGAAGATCGCAGGCTGTGATCTGAGCCTTGACAGCACAATCATCGCCAAAACGTCAGTGCGCCTGTGTAAAAGCTACCCGGATTGTGACAATTGCGAGGCTCTTCACTTATGTAAATACTTTATTTGGGGTAACTGCAGATTTGGAAATGGAAGTGGCAAATGCAAACATTCCCACGACATTCATTCAGCCCAGAATTTGGCCATTTTGAGAAAAAATCAGCTGCAGGACCTGGATGAAGTGAAGCTATCTGCTTCCATTATAATAAAGGCAATGAAGAATATGGATCCTGCAACTACAAAACCAAGTGAGCCAAACTCCATGTTTGCCAGTACTTCTTTCAAGGAGACTGCAAGTTTGGACCTAGTTAGGTCTCACAAGTTTGACACAAATGCTACTCAAATATTAGAACGAAGATTCAGTGCGGAGAACATCAGGATTCTTCCTGCCATTTATAAGATGAAGTACATGATTGACAATCCTGCTAAGGGAACAAAAGTAATAACTGAAAAGAAATCAAAGGAAGTGTCAATGAAGTCCATCAGTGAAGTGGAGATCAATGAAATCTGCTTGTTTTACATCCGGAAACACTGCAGTTTCAACGATAAGTGTGCTCGAGTTCACTCTCATCTGCCTTATAAATGggaatttaaatatgatttaaaaacgTGGAAAGATATTCCCAACATGGAAGAAATTGAAAAGGCATACTGTAACCCAGAAAACAACACCAGTAAGGGACTCGATTTCATCACTATGAAATATGGATCTTCTAACGTCAGACGCCTCTCCACTGCCTCCTCGGTCACCAAACCTCCAAATTTCGTTCTGACCACAAAATGGGTCTGGTACTGGAAGAATGAACACGGGAAGTGGATTGAGTATGGGCACCATGCTGATAAGAAATCTGGGGCGTCAATCTCGTCAATCACCTTGGAAAAGGTCTATGCAGAAGGTGCTGACAGCAAGTCTTTCAGCGCCGCTGATCAGCAGTATGTTATATACTTTAAAGACATGTATCAGCAGAACCAAAAGCATTATACAAAAAGAGATGTACGAAGGCGGCCAAGATTTGTTTCTGTAGAAGAAGTGAAGAAAAAGCTTGAGACGTATCGGATTGCAGTAACTAACACTAAAGATGAATTCAAAACAGTGGAAACTGCCTTTAGGAAGACAATGAATACAAACCAAATCCACAAGATTGAACGGATCCAGAATCCATCTCTCTGGAAGGTGTTCCAGCAAAAAGAGCAAATGGAGAAAAGCAAAGAAGGGAAAGAAGTGGATGAGCGCTTCTTGTTCCATGGCACAAAAGCAGAATTGATTGATCCTATTTGTGAACAAAACTTTGACTGGAGAATCTGTGGAGTCAATGGCACATCATATGGAAAAGGAAGTTACTTTGCCAGGGATGCATCCTATTCTAATAAGTACTCCAAAGTTAAAGATGGCCACAAGTACATGTTTTTTGTGAGGGTCCTTGCTGGAGAATTCACCAAAGGACGCAGCAACATTGTACGCCCTCCTATATTGTATGACAGCTGTGTCAATTCTACGACGGATCCTACAATTTTTGTCATCTTTGAGAAATACCAGATCTACCCTGAGTACCTCATTGAGTACAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006859 True 1850 mRNA 0.41 12 23335086 23343567

Neighbor

gene id symbol gene type direction distance location
AMCG00006860 NA coding upstream 14313 23303455 ~ 23320773 (+)
AMCG00006861 NA coding upstream 45750 23284738 ~ 23289336 (+)
AMCG00006857 NA coding upstream 52364 23207193 ~ 23282722 (+)
AMCG00006856 NA coding upstream 177651 23149006 ~ 23157435 (+)
AMCG00006852 mon2 coding upstream 473049 22826983 ~ 22862037 (+)
AMCG00006858 NA coding downstream 11039 23354606 ~ 23369102 (+)
AMCG00006863 NA coding downstream 53302 23396869 ~ 23402875 (+)
AMCG00006867 hipk2 coding downstream 147443 23491010 ~ 23492095 (+)
AMCG00006872 NA coding downstream 230740 23574307 ~ 23580774 (+)
AMCG00006870 NA coding downstream 237328 23580895 ~ 23594391 (+)
G112955 LOC105913372 non-coding upstream 376481 22957248 ~ 22958605 (+)
G112954 NA non-coding upstream 378886 22953180 ~ 22956200 (+)
G112940 NA non-coding upstream 453730 22877389 ~ 22881356 (+)
G112938 NA non-coding upstream 470578 22863985 ~ 22864508 (+)
G112868 NA non-coding upstream 651899 22682960 ~ 22683187 (+)
G113075 NA non-coding downstream 236948 23580515 ~ 23597219 (+)
G113090 NA non-coding downstream 377815 23721382 ~ 23721632 (+)
G113159 NA non-coding downstream 733186 24076753 ~ 24288917 (+)
G113224 NA non-coding downstream 1027151 24370718 ~ 24372835 (+)
G113233 NA non-coding downstream 1066490 24410057 ~ 24410304 (+)
AMCG00006829 NA other upstream 1712578 21617632 ~ 21622508 (+)
AMCG00006820 NA other upstream 2030208 21265253 ~ 21304878 (+)
G112600 NA other upstream 2131885 21142865 ~ 21203201 (+)
G112567 NA other upstream 2286048 21048336 ~ 21049038 (+)
AMCG00006811 NA other upstream 2390109 20937497 ~ 20944977 (+)
AMCG00006865 hipk2 other downstream 165582 23509149 ~ 23554741 (+)
AMCG00006878 ndufb2,LOC102790702 other downstream 688522 24032089 ~ 24036112 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other downstream 961129 24304696 ~ 24335916 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other downstream 1165436 24509003 ~ 24587119 (+)
G113369 LOC108442871 other downstream 2274500 25618067 ~ 25618445 (+)

Expression


Co-expression Network